EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015000797 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 55916 bases
Position: chr8:21158017-21213932
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016838	Fox-1_C	PF12414.8	5.4e-37	1	1
ENSORLP00015032777	Fox-1_C	PF12414.8	9.4e-35	1	1
ENSORLP00015032777	RRM_1	PF00076.22	3.3e-18	1	1
ENSORLP00015016838	RRM_1	PF00076.22	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015034464	-	5102	-	ENSORLP00015032777	462 (aa)	-	-
ENSORLT00015025143	-	5102	-	ENSORLP00015016838	462 (aa)	-	-

Gene Model

Click here to download ENSORLG00015000797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015000797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015000797	-	85	53.009	ENSORLG00015009200	rbfox3b	78	50.172
ENSORLG00015000797	-	57	64.662	ENSORLG00015013464	rbfox1l	63	62.406
ENSORLG00015000797	-	100	71.975	ENSORLG00015007027	rbfox2	100	70.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015000797	-	94	57.442	ENSG00000100320	RBFOX2	99	58.730	Homo_sapiens
ENSORLG00015000797	-	100	91.202	ENSAPOG00000021561	-	100	91.202	Acanthochromis_polyacanthus
ENSORLG00015000797	-	100	73.729	ENSAPOG00000004877	rbfox2	100	72.495	Acanthochromis_polyacanthus
ENSORLG00015000797	-	62	67.284	ENSAMEG00000007228	RBFOX2	100	64.798	Ailuropoda_melanoleuca
ENSORLG00015000797	-	50	71.064	ENSACIG00000001690	rbfox2	90	66.797	Amphilophus_citrinellus
ENSORLG00015000797	-	100	92.888	ENSAOCG00000015358	-	100	92.026	Amphiprion_ocellaris
ENSORLG00015000797	-	100	73.729	ENSAOCG00000013752	rbfox2	100	72.495	Amphiprion_ocellaris
ENSORLG00015000797	-	100	92.888	ENSAPEG00000013905	-	100	92.026	Amphiprion_percula
ENSORLG00015000797	-	100	73.941	ENSAPEG00000022359	rbfox2	100	72.708	Amphiprion_percula
ENSORLG00015000797	-	100	90.343	ENSATEG00000009959	-	100	90.558	Anabas_testudineus
ENSORLG00015000797	-	100	72.611	ENSATEG00000021951	rbfox2	100	72.068	Anabas_testudineus
ENSORLG00015000797	-	72	61.725	ENSAPLG00000007609	RBFOX2	81	62.763	Anas_platyrhynchos
ENSORLG00015000797	-	94	56.405	ENSACAG00000016535	RBFOX2	96	56.114	Anolis_carolinensis
ENSORLG00015000797	-	63	67.178	ENSANAG00000015245	RBFOX2	99	64.706	Aotus_nancymaae
ENSORLG00015000797	-	100	73.248	ENSACLG00000009744	rbfox2	100	72.222	Astatotilapia_calliptera
ENSORLG00015000797	-	100	90.558	ENSACLG00000017380	-	100	90.625	Astatotilapia_calliptera
ENSORLG00015000797	-	100	71.882	ENSAMXG00000011451	rbfox2	100	70.085	Astyanax_mexicanus
ENSORLG00015000797	-	91	58.030	ENSBTAG00000020125	RBFOX2	98	56.250	Bos_taurus
ENSORLG00015000797	-	78	61.055	ENSCJAG00000038886	-	95	58.734	Callithrix_jacchus
ENSORLG00015000797	-	91	58.458	ENSCJAG00000019456	-	98	58.647	Callithrix_jacchus
ENSORLG00015000797	-	78	61.055	ENSCAFG00000001701	RBFOX2	98	58.734	Canis_familiaris
ENSORLG00015000797	-	91	51.957	ENSCAFG00020004541	RBFOX2	96	49.453	Canis_lupus_dingo
ENSORLG00015000797	-	91	58.315	ENSCHIG00000014027	RBFOX2	97	58.603	Capra_hircus
ENSORLG00015000797	-	81	61.244	ENSTSYG00000014123	RBFOX2	100	58.795	Carlito_syrichta
ENSORLG00015000797	-	69	61.538	ENSCAPG00000014308	RBFOX2	87	55.786	Cavia_aperea
ENSORLG00015000797	-	79	61.347	ENSCPOG00000022180	RBFOX2	97	59.045	Cavia_porcellus
ENSORLG00015000797	-	91	58.547	ENSCCAG00000036584	RBFOX2	96	56.774	Cebus_capucinus
ENSORLG00015000797	-	91	56.616	ENSCATG00000038655	RBFOX2	97	57.421	Cercocebus_atys
ENSORLG00015000797	-	78	59.649	ENSCLAG00000017106	RBFOX2	99	57.360	Chinchilla_lanigera
ENSORLG00015000797	-	65	58.824	ENSCSAG00000008110	RBFOX2	88	58.529	Chlorocebus_sabaeus
ENSORLG00015000797	-	65	56.176	ENSCHOG00000002887	RBFOX2	100	55.882	Choloepus_hoffmanni
ENSORLG00015000797	-	72	61.995	ENSCPBG00000023144	RBFOX2	96	59.783	Chrysemys_picta_bellii
ENSORLG00015000797	-	81	61.244	ENSCANG00000035832	RBFOX2	100	59.036	Colobus_angolensis_palliatus
ENSORLG00015000797	-	91	58.280	ENSCGRG00001017727	Rbfox2	98	56.171	Cricetulus_griseus_chok1gshd
ENSORLG00015000797	-	78	60.644	ENSCGRG00000014237	Rbfox2	98	58.354	Cricetulus_griseus_crigri
ENSORLG00015000797	-	100	67.671	ENSCSEG00000007748	rbfox2	100	67.137	Cynoglossus_semilaevis
ENSORLG00015000797	-	100	85.833	ENSCSEG00000007360	-	100	86.875	Cynoglossus_semilaevis
ENSORLG00015000797	-	78	77.297	ENSCVAG00000016503	-	98	77.568	Cyprinodon_variegatus
ENSORLG00015000797	-	52	77.600	ENSDARG00000052182	rbfox2	100	77.642	Danio_rerio
ENSORLG00015000797	-	72	62.432	ENSDNOG00000004372	RBFOX2	87	60.218	Dasypus_novemcinctus
ENSORLG00015000797	-	72	57.951	ENSDORG00000015003	Rbfox2	96	56.250	Dipodomys_ordii
ENSORLG00015000797	-	71	73.973	ENSETEG00000005638	RBFOX2	83	65.035	Echinops_telfairi
ENSORLG00015000797	-	91	58.621	ENSEASG00005018920	RBFOX2	96	56.616	Equus_asinus_asinus
ENSORLG00015000797	-	91	58.621	ENSECAG00000018923	RBFOX2	96	56.616	Equus_caballus
ENSORLG00015000797	-	78	54.839	ENSEEUG00000004549	RBFOX2	100	52.500	Erinaceus_europaeus
ENSORLG00015000797	-	52	73.770	ENSELUG00000000102	rbfox2	100	73.770	Esox_lucius
ENSORLG00015000797	-	100	75.967	ENSELUG00000009404	-	100	73.717	Esox_lucius
ENSORLG00015000797	-	91	57.479	ENSFCAG00000010061	RBFOX2	97	56.030	Felis_catus
ENSORLG00015000797	-	72	61.995	ENSFALG00000013111	RBFOX2	90	59.783	Ficedula_albicollis
ENSORLG00015000797	-	56	52.560	ENSFDAG00000006204	RBFOX2	55	65.829	Fukomys_damarensis
ENSORLG00015000797	-	100	73.404	ENSFHEG00000010546	rbfox2	100	72.068	Fundulus_heteroclitus
ENSORLG00015000797	-	79	58.040	ENSGMOG00000005278	rbfox2	99	57.252	Gadus_morhua
ENSORLG00015000797	-	56	55.631	ENSGALG00000012540	RBFOX2	75	55.631	Gallus_gallus
ENSORLG00015000797	-	53	74.390	ENSGAFG00000017428	-	95	74.797	Gambusia_affinis
ENSORLG00015000797	-	79	62.871	ENSGACG00000015968	rbfox2	98	64.822	Gasterosteus_aculeatus
ENSORLG00015000797	-	78	69.845	ENSGACG00000007174	-	98	71.649	Gasterosteus_aculeatus
ENSORLG00015000797	-	78	60.652	ENSGAGG00000025884	RBFOX2	98	58.333	Gopherus_agassizii
ENSORLG00015000797	-	91	58.065	ENSGGOG00000037332	RBFOX2	96	56.438	Gorilla_gorilla
ENSORLG00015000797	-	100	90.968	ENSHBUG00000000856	-	100	90.604	Haplochromis_burtoni
ENSORLG00015000797	-	100	73.248	ENSHBUG00000004356	rbfox2	100	72.222	Haplochromis_burtoni
ENSORLG00015000797	-	94	55.417	ENSHGLG00000012907	RBFOX2	99	59.367	Heterocephalus_glaber_female
ENSORLG00015000797	-	72	62.400	ENSHGLG00100009986	RBFOX2	91	60.215	Heterocephalus_glaber_male
ENSORLG00015000797	-	100	85.376	ENSHCOG00000005662	-	100	84.731	Hippocampus_comes
ENSORLG00015000797	-	100	68.763	ENSHCOG00000016102	rbfox2	100	68.870	Hippocampus_comes
ENSORLG00015000797	-	100	69.182	ENSIPUG00000016896	rbfox2	96	72.014	Ictalurus_punctatus
ENSORLG00015000797	-	78	58.897	ENSSTOG00000014841	RBFOX2	98	56.061	Ictidomys_tridecemlineatus
ENSORLG00015000797	-	78	59.343	ENSJJAG00000014885	Rbfox2	98	57.323	Jaculus_jaculus
ENSORLG00015000797	-	100	72.128	ENSKMAG00000021880	-	100	71.245	Kryptolebias_marmoratus
ENSORLG00015000797	-	100	88.723	ENSKMAG00000013354	-	100	89.574	Kryptolebias_marmoratus
ENSORLG00015000797	-	65	59.767	ENSLACG00000003339	RBFOX2	72	61.921	Latimeria_chalumnae
ENSORLG00015000797	-	72	60.800	ENSLAFG00000027140	RBFOX2	93	59.140	Loxodonta_africana
ENSORLG00015000797	-	91	56.616	ENSMFAG00000031994	RBFOX2	96	59.367	Macaca_fascicularis
ENSORLG00015000797	-	78	61.307	ENSMMUG00000014010	RBFOX2	96	60.598	Macaca_mulatta
ENSORLG00015000797	-	91	56.129	ENSMNEG00000034388	RBFOX2	97	57.108	Macaca_nemestrina
ENSORLG00015000797	-	81	61.244	ENSMLEG00000005854	RBFOX2	100	59.036	Mandrillus_leucophaeus
ENSORLG00015000797	-	100	83.691	ENSMAMG00000008980	-	100	84.764	Mastacembelus_armatus
ENSORLG00015000797	-	100	73.207	ENSMAMG00000004293	rbfox2	100	72.128	Mastacembelus_armatus
ENSORLG00015000797	-	100	90.773	ENSMZEG00005004959	-	100	90.343	Maylandia_zebra
ENSORLG00015000797	-	100	72.766	ENSMZEG00005023838	rbfox2	100	71.734	Maylandia_zebra
ENSORLG00015000797	-	78	59.500	ENSMAUG00000018816	Rbfox2	98	56.423	Mesocricetus_auratus
ENSORLG00015000797	-	60	47.742	ENSMICG00000046341	-	78	47.419	Microcebus_murinus
ENSORLG00015000797	-	94	57.531	ENSMICG00000035417	RBFOX2	98	58.396	Microcebus_murinus
ENSORLG00015000797	-	78	58.647	ENSMOCG00000009327	Rbfox2	98	55.808	Microtus_ochrogaster
ENSORLG00015000797	-	52	70.782	ENSMMOG00000008287	rbfox2	100	69.583	Mola_mola
ENSORLG00015000797	-	72	59.481	ENSMODG00000001122	RBFOX2	93	57.330	Monodelphis_domestica
ENSORLG00015000797	-	52	81.707	ENSMALG00000000623	rbfox2	100	80.579	Monopterus_albus
ENSORLG00015000797	-	91	57.112	MGP_CAROLIEiJ_G0019957	Rbfox2	98	55.556	Mus_caroli
ENSORLG00015000797	-	91	56.838	ENSMUSG00000033565	Rbfox2	98	55.556	Mus_musculus
ENSORLG00015000797	-	91	56.897	MGP_PahariEiJ_G0019967	Rbfox2	98	55.556	Mus_pahari
ENSORLG00015000797	-	91	57.112	MGP_SPRETEiJ_G0020860	Rbfox2	98	55.556	Mus_spretus
ENSORLG00015000797	-	81	61.005	ENSMPUG00000012555	RBFOX2	97	58.795	Mustela_putorius_furo
ENSORLG00015000797	-	81	58.852	ENSMLUG00000002676	RBFOX2	98	58.134	Myotis_lucifugus
ENSORLG00015000797	-	62	64.907	ENSNGAG00000020528	Rbfox2	98	55.556	Nannospalax_galili
ENSORLG00015000797	-	84	89.770	ENSNBRG00000001568	-	90	89.514	Neolamprologus_brichardi
ENSORLG00015000797	-	100	72.881	ENSNBRG00000018155	rbfox2	100	71.642	Neolamprologus_brichardi
ENSORLG00015000797	-	85	60.183	ENSNLEG00000034979	RBFOX2	100	58.065	Nomascus_leucogenys
ENSORLG00015000797	-	81	57.656	ENSMEUG00000001547	RBFOX2	100	55.422	Notamacropus_eugenii
ENSORLG00015000797	-	82	77.320	ENSOPRG00000014878	RBFOX2	81	64.894	Ochotona_princeps
ENSORLG00015000797	-	91	58.798	ENSODEG00000009937	RBFOX2	98	57.576	Octodon_degus
ENSORLG00015000797	-	78	77.778	ENSONIG00000008341	-	99	77.451	Oreochromis_niloticus
ENSORLG00015000797	-	79	65.610	ENSONIG00000017998	rbfox2	97	64.532	Oreochromis_niloticus
ENSORLG00015000797	-	56	60.068	ENSOANG00000007489	RBFOX2	89	60.068	Ornithorhynchus_anatinus
ENSORLG00015000797	-	81	53.699	ENSOCUG00000001349	RBFOX2	97	51.691	Oryctolagus_cuniculus
ENSORLG00015000797	-	100	71.762	ENSORLG00000028082	rbfox2	100	70.601	Oryzias_latipes
ENSORLG00015000797	-	100	99.351	ENSORLG00000014948	-	100	99.351	Oryzias_latipes
ENSORLG00015000797	-	100	99.567	ENSORLG00020005676	-	100	99.567	Oryzias_latipes_hni
ENSORLG00015000797	-	100	71.975	ENSORLG00020008976	rbfox2	100	70.815	Oryzias_latipes_hni
ENSORLG00015000797	-	100	72.399	ENSOMEG00000015966	rbfox2	100	71.154	Oryzias_melastigma
ENSORLG00015000797	-	100	98.060	ENSOMEG00000007909	-	100	98.060	Oryzias_melastigma
ENSORLG00015000797	-	78	60.697	ENSOGAG00000033250	RBFOX2	99	58.396	Otolemur_garnettii
ENSORLG00015000797	-	72	61.559	ENSOARG00000018669	RBFOX2	91	58.108	Ovis_aries
ENSORLG00015000797	-	82	61.045	ENSPPAG00000035653	RBFOX2	98	58.852	Pan_paniscus
ENSORLG00015000797	-	91	57.692	ENSPPRG00000015635	RBFOX2	96	60.054	Panthera_pardus
ENSORLG00015000797	-	78	60.546	ENSPTIG00000019147	RBFOX2	92	59.677	Panthera_tigris_altaica
ENSORLG00015000797	-	91	58.065	ENSPTRG00000014305	RBFOX2	96	56.438	Pan_troglodytes
ENSORLG00015000797	-	91	57.849	ENSPANG00000007030	RBFOX2	98	56.000	Papio_anubis
ENSORLG00015000797	-	100	66.311	ENSPKIG00000006854	-	100	65.451	Paramormyrops_kingsleyae
ENSORLG00015000797	-	57	65.753	ENSPKIG00000010816	-	73	65.517	Paramormyrops_kingsleyae
ENSORLG00015000797	-	78	60.652	ENSPSIG00000017828	RBFOX2	98	58.333	Pelodiscus_sinensis
ENSORLG00015000797	-	62	85.069	ENSPMGG00000016969	-	87	85.911	Periophthalmus_magnuspinnatus
ENSORLG00015000797	-	52	77.959	ENSPMGG00000007138	rbfox2	100	77.083	Periophthalmus_magnuspinnatus
ENSORLG00015000797	-	78	58.647	ENSPEMG00000012542	Rbfox2	98	55.808	Peromyscus_maniculatus_bairdii
ENSORLG00015000797	-	82	60.143	ENSPCIG00000021550	RBFOX2	98	58.040	Phascolarctos_cinereus
ENSORLG00015000797	-	69	89.164	ENSPFOG00000001869	-	100	89.474	Poecilia_formosa
ENSORLG00015000797	-	100	72.399	ENSPFOG00000014209	rbfox2	100	71.092	Poecilia_formosa
ENSORLG00015000797	-	52	79.012	ENSPLAG00000017308	rbfox2	100	77.686	Poecilia_latipinna
ENSORLG00015000797	-	52	95.851	ENSPLAG00000002710	-	100	95.851	Poecilia_latipinna
ENSORLG00015000797	-	52	80.488	ENSPMEG00000007320	rbfox2	100	79.339	Poecilia_mexicana
ENSORLG00015000797	-	52	96.266	ENSPMEG00000013663	-	100	96.266	Poecilia_mexicana
ENSORLG00015000797	-	52	78.455	ENSPREG00000012955	rbfox2	100	77.593	Poecilia_reticulata
ENSORLG00015000797	-	91	58.065	ENSPPYG00000011766	RBFOX2	96	56.438	Pongo_abelii
ENSORLG00015000797	-	72	58.491	ENSPCOG00000016273	RBFOX2	92	56.131	Propithecus_coquereli
ENSORLG00015000797	-	51	66.909	ENSPVAG00000015844	RBFOX2	66	62.500	Pteropus_vampyrus
ENSORLG00015000797	-	100	91.183	ENSPNYG00000020595	-	100	90.753	Pundamilia_nyererei
ENSORLG00015000797	-	100	72.881	ENSPNYG00000016161	rbfox2	100	71.855	Pundamilia_nyererei
ENSORLG00015000797	-	100	65.539	ENSPNAG00000000168	rbfox2	100	64.316	Pygocentrus_nattereri
ENSORLG00015000797	-	99	58.228	ENSPNAG00000014196	-	100	56.503	Pygocentrus_nattereri
ENSORLG00015000797	-	81	58.213	ENSRNOG00000004688	Rbfox2	97	56.204	Rattus_norvegicus
ENSORLG00015000797	-	78	61.307	ENSRBIG00000033696	RBFOX2	98	56.566	Rhinopithecus_bieti
ENSORLG00015000797	-	91	58.065	ENSRROG00000035715	RBFOX2	97	58.706	Rhinopithecus_roxellana
ENSORLG00015000797	-	81	61.501	ENSSBOG00000028291	RBFOX2	99	59.124	Saimiri_boliviensis_boliviensis
ENSORLG00015000797	-	81	60.482	ENSSHAG00000006835	RBFOX2	97	58.111	Sarcophilus_harrisii
ENSORLG00015000797	-	100	65.618	ENSSFOG00015010482	-	99	72.944	Scleropages_formosus
ENSORLG00015000797	-	51	77.966	ENSSFOG00015013291	-	76	77.682	Scleropages_formosus
ENSORLG00015000797	-	100	71.975	ENSSMAG00000013662	rbfox2	100	71.368	Scophthalmus_maximus
ENSORLG00015000797	-	100	88.248	ENSSMAG00000004317	-	100	86.538	Scophthalmus_maximus
ENSORLG00015000797	-	100	89.914	ENSSDUG00000009511	-	100	90.558	Seriola_dumerili
ENSORLG00015000797	-	100	74.310	ENSSDUG00000004292	rbfox2	100	73.077	Seriola_dumerili
ENSORLG00015000797	-	85	74.436	ENSSLDG00000023983	rbfox2	83	74.555	Seriola_lalandi_dorsalis
ENSORLG00015000797	-	100	90.558	ENSSLDG00000018052	-	100	90.343	Seriola_lalandi_dorsalis
ENSORLG00015000797	-	55	56.701	ENSSPUG00000011797	RBFOX2	76	56.701	Sphenodon_punctatus
ENSORLG00015000797	-	100	73.941	ENSSPAG00000013681	rbfox2	100	72.708	Stegastes_partitus
ENSORLG00015000797	-	100	90.773	ENSSPAG00000016272	-	100	90.987	Stegastes_partitus
ENSORLG00015000797	-	81	61.594	ENSSSCG00000000152	RBFOX2	98	58.987	Sus_scrofa
ENSORLG00015000797	-	72	61.995	ENSTGUG00000010808	RBFOX2	93	59.783	Taeniopygia_guttata
ENSORLG00015000797	-	79	67.442	ENSTRUG00000007739	-	97	65.544	Takifugu_rubripes
ENSORLG00015000797	-	55	80.172	ENSTBEG00000003297	-	62	80.172	Tupaia_belangeri
ENSORLG00015000797	-	81	61.005	ENSTTRG00000006922	RBFOX2	100	58.795	Tursiops_truncatus
ENSORLG00015000797	-	76	59.439	ENSUAMG00000010612	RBFOX2	88	58.449	Ursus_americanus
ENSORLG00015000797	-	62	58.567	ENSUMAG00000016785	RBFOX2	77	58.255	Ursus_maritimus
ENSORLG00015000797	-	81	55.981	ENSVPAG00000002824	RBFOX2	100	54.699	Vicugna_pacos
ENSORLG00015000797	-	83	59.953	ENSVVUG00000023561	RBFOX2	100	57.783	Vulpes_vulpes
ENSORLG00015000797	-	68	61.648	ENSXETG00000000231	rbfox2	85	59.483	Xenopus_tropicalis
ENSORLG00015000797	-	58	97.674	ENSXCOG00000015905	-	84	97.674	Xiphophorus_couchianus
ENSORLG00015000797	-	100	87.931	ENSXMAG00000026769	-	100	88.362	Xiphophorus_maculatus
ENSORLG00015000797	-	78	71.622	ENSXMAG00000029498	rbfox2	90	71.858	Xiphophorus_maculatus