EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015001072 (Gene tree)
Gene ID: -
Gene Symbol: farsb
Alias: -
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 13733 bases
Position: chr13:18833958-18847690
Accession: ZDB-GENE-021206-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015000456	B3_4	PF03483.17	2.2e-26	1	1
ENSORLP00015021926	B3_4	PF03483.17	3e-26	1	1
ENSORLP00015000432	B3_4	PF03483.17	8.9e-16	1	1
ENSORLP00015000432	B5	PF03484.15	1.8e-15	1	1
ENSORLP00015000456	B5	PF03484.15	2.5e-15	1	1
ENSORLP00015021926	B5	PF03484.15	4.3e-15	1	1
ENSORLP00015021926	EF1_GNE	PF00736.19	6.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015014315	-	3112	-	ENSORLP00015000456	683 (aa)	-	-
ENSORLT00015014307	-	3204	-	ENSORLP00015021926	846 (aa)	-	-
ENSORLT00015014340	-	1704	-	ENSORLP00015000432	567 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001072	farsb	100	67.288	ENSG00000116120	FARSB	100	75.254	Homo_sapiens
ENSORLG00015001072	farsb	100	88.433	ENSAPOG00000013072	farsb	100	87.618	Acanthochromis_polyacanthus
ENSORLG00015001072	farsb	100	67.288	ENSAMEG00000005984	FARSB	100	75.254	Ailuropoda_melanoleuca
ENSORLG00015001072	farsb	100	80.546	ENSACIG00000021623	farsb	100	87.436	Amphilophus_citrinellus
ENSORLG00015001072	farsb	100	87.701	ENSAOCG00000004912	farsb	100	87.097	Amphiprion_ocellaris
ENSORLG00015001072	farsb	100	87.701	ENSAPEG00000001153	farsb	100	86.910	Amphiprion_percula
ENSORLG00015001072	farsb	100	87.262	ENSATEG00000021441	farsb	100	86.643	Anabas_testudineus
ENSORLG00015001072	farsb	99	67.410	ENSAPLG00000010292	FARSB	99	75.815	Anas_platyrhynchos
ENSORLG00015001072	farsb	100	69.779	ENSACAG00000004769	FARSB	98	77.080	Anolis_carolinensis
ENSORLG00015001072	farsb	100	66.610	ENSANAG00000024637	FARSB	100	74.576	Aotus_nancymaae
ENSORLG00015001072	farsb	100	87.994	ENSACLG00000013951	farsb	100	89.027	Astatotilapia_calliptera
ENSORLG00015001072	farsb	73	81.363	ENSAMXG00000033881	farsb	100	81.363	Astyanax_mexicanus
ENSORLG00015001072	farsb	100	68.305	ENSBTAG00000011649	FARSB	100	75.932	Bos_taurus
ENSORLG00015001072	farsb	96	67.080	ENSBTAG00000045523	-	100	75.044	Bos_taurus
ENSORLG00015001072	farsb	100	50.505	WBGene00001498	fars-3	100	58.685	Caenorhabditis_elegans
ENSORLG00015001072	farsb	100	67.288	ENSCJAG00000012181	FARSB	100	75.254	Callithrix_jacchus
ENSORLG00015001072	farsb	100	68.305	ENSCAFG00000016094	-	100	76.102	Canis_familiaris
ENSORLG00015001072	farsb	100	65.646	ENSCAFG00020026684	FARSB	100	75.709	Canis_lupus_dingo
ENSORLG00015001072	farsb	100	68.475	ENSCHIG00000014275	FARSB	100	76.441	Capra_hircus
ENSORLG00015001072	farsb	100	67.458	ENSTSYG00000008461	FARSB	100	74.915	Carlito_syrichta
ENSORLG00015001072	farsb	95	62.172	ENSCAPG00000016436	FARSB	98	70.324	Cavia_aperea
ENSORLG00015001072	farsb	100	67.288	ENSCPOG00000013109	FARSB	100	75.085	Cavia_porcellus
ENSORLG00015001072	farsb	100	63.051	ENSCCAG00000025840	FARSB	100	71.017	Cebus_capucinus
ENSORLG00015001072	farsb	100	67.288	ENSCATG00000036168	FARSB	100	75.254	Cercocebus_atys
ENSORLG00015001072	farsb	100	67.458	ENSCLAG00000011954	FARSB	100	75.424	Chinchilla_lanigera
ENSORLG00015001072	farsb	100	67.288	ENSCSAG00000007806	FARSB	100	75.254	Chlorocebus_sabaeus
ENSORLG00015001072	farsb	83	86.364	ENSCHOG00000011785	FARSB	81	86.364	Choloepus_hoffmanni
ENSORLG00015001072	farsb	100	69.610	ENSCPBG00000019346	FARSB	98	78.438	Chrysemys_picta_bellii
ENSORLG00015001072	farsb	99	56.020	ENSCING00000004180	-	99	61.538	Ciona_intestinalis
ENSORLG00015001072	farsb	99	55.814	ENSCSAVG00000005346	-	99	62.040	Ciona_savignyi
ENSORLG00015001072	farsb	96	67.018	ENSCANG00000036239	FARSB	100	75.088	Colobus_angolensis_palliatus
ENSORLG00015001072	farsb	100	68.136	ENSCGRG00001022928	Farsb	100	75.932	Cricetulus_griseus_chok1gshd
ENSORLG00015001072	farsb	100	68.136	ENSCGRG00000001513	Farsb	100	75.932	Cricetulus_griseus_crigri
ENSORLG00015001072	farsb	100	80.136	ENSCSEG00000005415	farsb	100	88.622	Cynoglossus_semilaevis
ENSORLG00015001072	farsb	66	87.111	ENSCVAG00000018815	farsb	98	87.111	Cyprinodon_variegatus
ENSORLG00015001072	farsb	100	74.576	ENSDARG00000016864	farsb	100	83.729	Danio_rerio
ENSORLG00015001072	farsb	100	66.780	ENSDNOG00000002511	FARSB	100	74.068	Dasypus_novemcinctus
ENSORLG00015001072	farsb	100	67.627	ENSDORG00000011102	Farsb	100	74.915	Dipodomys_ordii
ENSORLG00015001072	farsb	100	54.591	FBgn0039175	beta-PheRS	100	61.720	Drosophila_melanogaster
ENSORLG00015001072	farsb	96	65.088	ENSETEG00000015080	FARSB	100	73.158	Echinops_telfairi
ENSORLG00015001072	farsb	100	59.153	ENSEBUG00000006846	farsb	100	65.763	Eptatretus_burgeri
ENSORLG00015001072	farsb	100	68.136	ENSEASG00005011297	FARSB	100	75.424	Equus_asinus_asinus
ENSORLG00015001072	farsb	100	65.794	ENSECAG00000023086	FARSB	99	75.596	Equus_caballus
ENSORLG00015001072	farsb	100	55.444	ENSEEUG00000007441	FARSB	100	60.000	Erinaceus_europaeus
ENSORLG00015001072	farsb	97	77.098	ENSELUG00000014767	farsb	99	86.515	Esox_lucius
ENSORLG00015001072	farsb	100	67.966	ENSFCAG00000026772	FARSB	100	76.102	Felis_catus
ENSORLG00015001072	farsb	96	67.311	ENSFALG00000006739	FARSB	96	76.450	Ficedula_albicollis
ENSORLG00015001072	farsb	100	67.627	ENSFDAG00000008871	FARSB	100	75.424	Fukomys_damarensis
ENSORLG00015001072	farsb	100	88.141	ENSFHEG00000020939	farsb	98	91.852	Fundulus_heteroclitus
ENSORLG00015001072	farsb	91	74.815	ENSGMOG00000013047	farsb	99	84.416	Gadus_morhua
ENSORLG00015001072	farsb	100	68.930	ENSGALG00000005236	FARSB	100	77.080	Gallus_gallus
ENSORLG00015001072	farsb	100	86.091	ENSGAFG00000020900	farsb	100	84.770	Gambusia_affinis
ENSORLG00015001072	farsb	91	77.551	ENSGACG00000000261	farsb	99	89.239	Gasterosteus_aculeatus
ENSORLG00015001072	farsb	100	69.949	ENSGAGG00000016575	FARSB	98	78.778	Gopherus_agassizii
ENSORLG00015001072	farsb	100	87.994	ENSHBUG00000022379	farsb	100	88.625	Haplochromis_burtoni
ENSORLG00015001072	farsb	100	67.458	ENSHGLG00000015965	FARSB	100	75.424	Heterocephalus_glaber_female
ENSORLG00015001072	farsb	100	67.458	ENSHGLG00100001035	FARSB	100	75.424	Heterocephalus_glaber_male
ENSORLG00015001072	farsb	91	72.316	ENSHCOG00000016462	farsb	100	80.597	Hippocampus_comes
ENSORLG00015001072	farsb	100	73.854	ENSIPUG00000002754	farsb	100	83.531	Ictalurus_punctatus
ENSORLG00015001072	farsb	100	67.797	ENSSTOG00000016169	FARSB	100	75.593	Ictidomys_tridecemlineatus
ENSORLG00015001072	farsb	100	67.627	ENSJJAG00000003267	Farsb	100	75.424	Jaculus_jaculus
ENSORLG00015001072	farsb	100	72.917	ENSKMAG00000005363	farsb	100	81.557	Kryptolebias_marmoratus
ENSORLG00015001072	farsb	100	86.091	ENSLBEG00000018127	farsb	100	85.360	Labrus_bergylta
ENSORLG00015001072	farsb	100	70.458	ENSLACG00000002551	FARSB	100	79.287	Latimeria_chalumnae
ENSORLG00015001072	farsb	100	73.729	ENSLOCG00000004136	farsb	100	83.362	Lepisosteus_oculatus
ENSORLG00015001072	farsb	100	66.949	ENSLAFG00000015659	FARSB	100	74.746	Loxodonta_africana
ENSORLG00015001072	farsb	100	67.119	ENSMFAG00000036645	FARSB	100	75.085	Macaca_fascicularis
ENSORLG00015001072	farsb	100	64.746	ENSMMUG00000007685	FARSB	100	72.712	Macaca_mulatta
ENSORLG00015001072	farsb	100	66.949	ENSMNEG00000030672	FARSB	100	74.915	Macaca_nemestrina
ENSORLG00015001072	farsb	100	67.288	ENSMLEG00000042060	FARSB	100	75.254	Mandrillus_leucophaeus
ENSORLG00015001072	farsb	100	87.007	ENSMAMG00000011835	farsb	100	86.219	Mastacembelus_armatus
ENSORLG00015001072	farsb	96	78.153	ENSMZEG00005004544	farsb	100	89.007	Maylandia_zebra
ENSORLG00015001072	farsb	95	67.979	ENSMGAG00000004670	FARSB	100	76.386	Meleagris_gallopavo
ENSORLG00015001072	farsb	71	75.000	ENSMAUG00000017805	Farsb	100	75.000	Mesocricetus_auratus
ENSORLG00015001072	farsb	100	67.797	ENSMICG00000002495	FARSB	100	75.932	Microcebus_murinus
ENSORLG00015001072	farsb	100	68.251	ENSMOCG00000003181	Farsb	100	76.061	Microtus_ochrogaster
ENSORLG00015001072	farsb	100	73.379	ENSMMOG00000006265	farsb	100	81.154	Mola_mola
ENSORLG00015001072	farsb	100	69.610	ENSMODG00000021192	FARSB	100	77.080	Monodelphis_domestica
ENSORLG00015001072	farsb	93	79.891	ENSMALG00000021188	farsb	92	91.107	Monopterus_albus
ENSORLG00015001072	farsb	100	68.305	MGP_CAROLIEiJ_G0014310	Farsb	100	75.932	Mus_caroli
ENSORLG00015001072	farsb	100	68.136	ENSMUSG00000026245	Farsb	100	75.763	Mus_musculus
ENSORLG00015001072	farsb	100	68.305	MGP_PahariEiJ_G0027548	Farsb	100	75.932	Mus_pahari
ENSORLG00015001072	farsb	100	68.136	MGP_SPRETEiJ_G0015116	Farsb	100	75.763	Mus_spretus
ENSORLG00015001072	farsb	100	68.475	ENSMPUG00000016677	FARSB	100	76.102	Mustela_putorius_furo
ENSORLG00015001072	farsb	100	68.644	ENSMLUG00000010904	FARSB	100	76.441	Myotis_lucifugus
ENSORLG00015001072	farsb	100	67.063	ENSNGAG00000014602	Farsb	100	75.042	Nannospalax_galili
ENSORLG00015001072	farsb	100	88.287	ENSNBRG00000003198	farsb	100	87.264	Neolamprologus_brichardi
ENSORLG00015001072	farsb	100	67.458	ENSNLEG00000009638	FARSB	100	75.424	Nomascus_leucogenys
ENSORLG00015001072	farsb	100	59.593	ENSMEUG00000010798	FARSB	100	67.402	Notamacropus_eugenii
ENSORLG00015001072	farsb	92	67.626	ENSOPRG00000003292	FARSB	89	70.000	Ochotona_princeps
ENSORLG00015001072	farsb	100	68.305	ENSODEG00000005451	FARSB	100	76.102	Octodon_degus
ENSORLG00015001072	farsb	100	81.324	ENSONIG00000014639	farsb	100	92.190	Oreochromis_niloticus
ENSORLG00015001072	farsb	90	65.672	ENSOANG00000015387	FARSB	99	74.532	Ornithorhynchus_anatinus
ENSORLG00015001072	farsb	91	68.015	ENSOCUG00000007828	FARSB	94	76.067	Oryctolagus_cuniculus
ENSORLG00015001072	farsb	100	99.122	ENSORLG00000009135	farsb	100	99.122	Oryzias_latipes
ENSORLG00015001072	farsb	100	94.729	ENSOMEG00000019009	farsb	100	94.444	Oryzias_melastigma
ENSORLG00015001072	farsb	100	63.712	ENSOGAG00000010125	FARSB	100	70.234	Otolemur_garnettii
ENSORLG00015001072	farsb	100	68.644	ENSOARG00000020329	FARSB	100	76.441	Ovis_aries
ENSORLG00015001072	farsb	100	67.797	ENSPPAG00000039268	FARSB	100	75.763	Pan_paniscus
ENSORLG00015001072	farsb	100	67.966	ENSPPRG00000010687	FARSB	100	75.932	Panthera_pardus
ENSORLG00015001072	farsb	100	67.627	ENSPTIG00000004299	FARSB	100	75.763	Panthera_tigris_altaica
ENSORLG00015001072	farsb	100	67.797	ENSPTRG00000012974	FARSB	100	75.763	Pan_troglodytes
ENSORLG00015001072	farsb	100	67.288	ENSPANG00000016304	FARSB	100	75.254	Papio_anubis
ENSORLG00015001072	farsb	100	72.835	ENSPKIG00000006661	farsb	100	82.003	Paramormyrops_kingsleyae
ENSORLG00015001072	farsb	99	68.995	ENSPSIG00000006248	FARSB	99	77.513	Pelodiscus_sinensis
ENSORLG00015001072	farsb	72	88.139	ENSPMGG00000002815	farsb	100	88.139	Periophthalmus_magnuspinnatus
ENSORLG00015001072	farsb	100	68.814	ENSPEMG00000003131	Farsb	100	76.271	Peromyscus_maniculatus_bairdii
ENSORLG00015001072	farsb	100	69.100	ENSPCIG00000019458	FARSB	100	76.910	Phascolarctos_cinereus
ENSORLG00015001072	farsb	100	88.287	ENSPLAG00000001104	farsb	100	85.950	Poecilia_latipinna
ENSORLG00015001072	farsb	100	88.580	ENSPMEG00000017658	farsb	100	86.541	Poecilia_mexicana
ENSORLG00015001072	farsb	100	88.287	ENSPREG00000010583	farsb	100	86.187	Poecilia_reticulata
ENSORLG00015001072	farsb	100	67.458	ENSPPYG00000013221	FARSB	100	75.424	Pongo_abelii
ENSORLG00015001072	farsb	73	66.800	ENSPCAG00000002757	FARSB	85	66.800	Procavia_capensis
ENSORLG00015001072	farsb	68	83.333	ENSPCOG00000028852	FARSB	100	83.333	Propithecus_coquereli
ENSORLG00015001072	farsb	100	67.627	ENSPVAG00000006985	FARSB	100	75.424	Pteropus_vampyrus
ENSORLG00015001072	farsb	100	75.958	ENSPNYG00000011433	farsb	100	77.759	Pundamilia_nyererei
ENSORLG00015001072	farsb	100	74.703	ENSPNAG00000021802	farsb	100	84.380	Pygocentrus_nattereri
ENSORLG00015001072	farsb	100	67.966	ENSRNOG00000014119	Farsb	100	75.932	Rattus_norvegicus
ENSORLG00015001072	farsb	92	66.545	ENSRBIG00000033191	FARSB	98	74.862	Rhinopithecus_bieti
ENSORLG00015001072	farsb	100	67.458	ENSRROG00000029388	FARSB	100	75.254	Rhinopithecus_roxellana
ENSORLG00015001072	farsb	100	39.512	YLR060W	FRS1	100	45.246	Saccharomyces_cerevisiae
ENSORLG00015001072	farsb	100	66.957	ENSSBOG00000019084	FARSB	100	67.797	Saimiri_boliviensis_boliviensis
ENSORLG00015001072	farsb	91	62.888	ENSSHAG00000015752	FARSB	99	71.664	Sarcophilus_harrisii
ENSORLG00015001072	farsb	100	70.707	ENSSFOG00015007850	farsb	100	80.985	Scleropages_formosus
ENSORLG00015001072	farsb	100	87.116	ENSSMAG00000020668	farsb	100	88.795	Scophthalmus_maximus
ENSORLG00015001072	farsb	100	88.580	ENSSDUG00000009685	farsb	100	86.678	Seriola_dumerili
ENSORLG00015001072	farsb	100	88.873	ENSSLDG00000025206	farsb	100	87.097	Seriola_lalandi_dorsalis
ENSORLG00015001072	farsb	56	74.658	ENSSARG00000005655	-	66	74.658	Sorex_araneus
ENSORLG00015001072	farsb	95	65.062	ENSSPUG00000002245	FARSB	100	74.153	Sphenodon_punctatus
ENSORLG00015001072	farsb	100	88.433	ENSSPAG00000007367	farsb	100	87.279	Stegastes_partitus
ENSORLG00015001072	farsb	100	67.059	ENSSSCG00000016226	-	100	74.915	Sus_scrofa
ENSORLG00015001072	farsb	100	63.636	ENSSSCG00000032016	-	100	69.661	Sus_scrofa
ENSORLG00015001072	farsb	96	66.784	ENSTGUG00000007788	FARSB	99	75.747	Taeniopygia_guttata
ENSORLG00015001072	farsb	100	82.723	ENSTRUG00000009483	farsb	100	82.624	Takifugu_rubripes
ENSORLG00015001072	farsb	100	77.066	ENSTNIG00000014310	farsb	100	86.248	Tetraodon_nigroviridis
ENSORLG00015001072	farsb	100	50.169	ENSTBEG00000003136	FARSB	100	52.034	Tupaia_belangeri
ENSORLG00015001072	farsb	75	79.085	ENSTTRG00000009082	FARSB	88	74.874	Tursiops_truncatus
ENSORLG00015001072	farsb	84	64.170	ENSUAMG00000024613	FARSB	99	71.058	Ursus_americanus
ENSORLG00015001072	farsb	100	67.458	ENSUMAG00000017995	FARSB	100	75.424	Ursus_maritimus
ENSORLG00015001072	farsb	91	64.022	ENSVPAG00000006844	FARSB	100	72.509	Vicugna_pacos
ENSORLG00015001072	farsb	100	68.484	ENSVVUG00000024025	FARSB	100	76.102	Vulpes_vulpes
ENSORLG00015001072	farsb	100	67.966	ENSXETG00000002934	farsb	100	75.593	Xenopus_tropicalis
ENSORLG00015001072	farsb	100	86.676	ENSXMAG00000008280	farsb	100	85.124	Xiphophorus_maculatus