EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015001122 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: -
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6849 bases
Position: chr12:15650321-15657169
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015000528	RTC	PF01137.21	4.4e-58	1	1
ENSORLP00015021971	RTC	PF01137.21	6.2e-47	1	1
ENSORLP00015000520	RTC	PF01137.21	1.2e-46	1	2
ENSORLP00015000520	RTC	PF01137.21	1.2e-46	2	2
ENSORLP00015000520	RTC_insert	PF05189.13	3e-35	1	1
ENSORLP00015000528	RTC_insert	PF05189.13	3.6e-35	1	1
ENSORLP00015021971	RTC_insert	PF05189.13	4.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015014190	-	1379	-	ENSORLP00015000528	372 (aa)	-	-
ENSORLT00015014201	-	1044	-	ENSORLP00015000520	347 (aa)	-	-
ENSORLT00015014194	-	1577	-	ENSORLP00015021971	438 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001122's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001122	rcl1	100	76.203	ENSG00000120158	RCL1	100	78.704	Homo_sapiens
ENSORLG00015001122	rcl1	100	87.903	ENSAPOG00000015666	rcl1	100	87.903	Acanthochromis_polyacanthus
ENSORLG00015001122	rcl1	100	77.273	ENSAMEG00000002631	RCL1	100	77.273	Ailuropoda_melanoleuca
ENSORLG00015001122	rcl1	100	88.172	ENSACIG00000021195	rcl1	100	88.172	Amphilophus_citrinellus
ENSORLG00015001122	rcl1	100	87.903	ENSAOCG00000002223	rcl1	100	87.903	Amphiprion_ocellaris
ENSORLG00015001122	rcl1	100	88.710	ENSAPEG00000006905	rcl1	100	88.710	Amphiprion_percula
ENSORLG00015001122	rcl1	100	85.215	ENSATEG00000020026	rcl1	100	85.215	Anabas_testudineus
ENSORLG00015001122	rcl1	88	73.252	ENSAPLG00000006031	RCL1	100	73.252	Anas_platyrhynchos
ENSORLG00015001122	rcl1	100	72.727	ENSACAG00000003640	RCL1	100	72.727	Anolis_carolinensis
ENSORLG00015001122	rcl1	100	75.668	ENSANAG00000037372	RCL1	100	75.668	Aotus_nancymaae
ENSORLG00015001122	rcl1	100	86.559	ENSACLG00000021724	rcl1	100	86.559	Astatotilapia_calliptera
ENSORLG00015001122	rcl1	99	79.891	ENSAMXG00000033394	rcl1	99	79.891	Astyanax_mexicanus
ENSORLG00015001122	rcl1	99	44.709	WBGene00022852	ZK1127.5	99	44.709	Caenorhabditis_elegans
ENSORLG00015001122	rcl1	100	75.936	ENSCJAG00000011202	RCL1	100	75.936	Callithrix_jacchus
ENSORLG00015001122	rcl1	100	77.273	ENSCAFG00000002091	RCL1	100	77.273	Canis_familiaris
ENSORLG00015001122	rcl1	100	77.273	ENSCAFG00020000638	RCL1	78	77.273	Canis_lupus_dingo
ENSORLG00015001122	rcl1	100	75.936	ENSCHIG00000012407	RCL1	100	75.936	Capra_hircus
ENSORLG00015001122	rcl1	88	77.744	ENSTSYG00000009592	RCL1	97	80.220	Carlito_syrichta
ENSORLG00015001122	rcl1	69	65.318	ENSCAPG00000013575	RCL1	100	65.318	Cavia_aperea
ENSORLG00015001122	rcl1	100	75.668	ENSCPOG00000015354	RCL1	100	75.668	Cavia_porcellus
ENSORLG00015001122	rcl1	100	75.936	ENSCCAG00000033505	RCL1	100	75.936	Cebus_capucinus
ENSORLG00015001122	rcl1	100	76.203	ENSCATG00000034721	RCL1	100	76.203	Cercocebus_atys
ENSORLG00015001122	rcl1	100	76.203	ENSCLAG00000007445	RCL1	100	76.203	Chinchilla_lanigera
ENSORLG00015001122	rcl1	100	76.203	ENSCSAG00000008811	RCL1	100	76.203	Chlorocebus_sabaeus
ENSORLG00015001122	rcl1	86	67.802	ENSCHOG00000007216	RCL1	100	67.802	Choloepus_hoffmanni
ENSORLG00015001122	rcl1	100	74.332	ENSCPBG00000025481	RCL1	94	74.545	Chrysemys_picta_bellii
ENSORLG00015001122	rcl1	99	58.108	ENSCING00000019565	-	98	58.108	Ciona_intestinalis
ENSORLG00015001122	rcl1	100	76.203	ENSCANG00000027099	RCL1	100	76.203	Colobus_angolensis_palliatus
ENSORLG00015001122	rcl1	100	77.005	ENSCGRG00001013748	Rcl1	100	77.005	Cricetulus_griseus_chok1gshd
ENSORLG00015001122	rcl1	88	78.116	ENSCGRG00000005843	Rcl1	99	78.116	Cricetulus_griseus_crigri
ENSORLG00015001122	rcl1	100	86.290	ENSCSEG00000000712	rcl1	98	86.290	Cynoglossus_semilaevis
ENSORLG00015001122	rcl1	100	86.828	ENSCVAG00000011536	rcl1	100	86.828	Cyprinodon_variegatus
ENSORLG00015001122	rcl1	99	78.747	ENSDARG00000038312	rcl1	100	78.747	Danio_rerio
ENSORLG00015001122	rcl1	72	76.692	ENSDNOG00000019911	RCL1	100	79.167	Dasypus_novemcinctus
ENSORLG00015001122	rcl1	99	76.694	ENSDORG00000015645	Rcl1	99	76.694	Dipodomys_ordii
ENSORLG00015001122	rcl1	99	51.842	FBgn0020909	Rtc1	99	53.018	Drosophila_melanogaster
ENSORLG00015001122	rcl1	67	95.652	ENSETEG00000014087	-	77	95.652	Echinops_telfairi
ENSORLG00015001122	rcl1	100	54.155	ENSEBUG00000016621	-	99	54.155	Eptatretus_burgeri
ENSORLG00015001122	rcl1	100	75.668	ENSEASG00005010653	RCL1	100	75.668	Equus_asinus_asinus
ENSORLG00015001122	rcl1	100	75.668	ENSECAG00000015973	RCL1	100	75.668	Equus_caballus
ENSORLG00015001122	rcl1	99	65.041	ENSEEUG00000009801	RCL1	99	65.041	Erinaceus_europaeus
ENSORLG00015001122	rcl1	100	76.882	ENSELUG00000007353	rcl1	100	76.882	Esox_lucius
ENSORLG00015001122	rcl1	100	75.936	ENSFCAG00000014557	RCL1	100	75.936	Felis_catus
ENSORLG00015001122	rcl1	98	67.857	ENSFALG00000010553	RCL1	96	67.857	Ficedula_albicollis
ENSORLG00015001122	rcl1	88	75.305	ENSFDAG00000004209	RCL1	100	75.305	Fukomys_damarensis
ENSORLG00015001122	rcl1	100	87.097	ENSFHEG00000011228	rcl1	100	87.097	Fundulus_heteroclitus
ENSORLG00015001122	rcl1	100	81.183	ENSGMOG00000004677	rcl1	100	81.183	Gadus_morhua
ENSORLG00015001122	rcl1	99	73.171	ENSGALG00000015024	RCL1	98	73.171	Gallus_gallus
ENSORLG00015001122	rcl1	100	86.559	ENSGAFG00000007257	rcl1	100	86.559	Gambusia_affinis
ENSORLG00015001122	rcl1	100	86.290	ENSGACG00000017474	rcl1	100	86.290	Gasterosteus_aculeatus
ENSORLG00015001122	rcl1	100	74.332	ENSGAGG00000003689	RCL1	100	74.332	Gopherus_agassizii
ENSORLG00015001122	rcl1	100	75.668	ENSGGOG00000015041	RCL1	100	75.668	Gorilla_gorilla
ENSORLG00015001122	rcl1	100	86.828	ENSHBUG00000001393	rcl1	100	86.828	Haplochromis_burtoni
ENSORLG00015001122	rcl1	100	75.668	ENSHGLG00000016452	RCL1	100	75.668	Heterocephalus_glaber_female
ENSORLG00015001122	rcl1	100	63.636	ENSHGLG00000005368	-	100	63.636	Heterocephalus_glaber_female
ENSORLG00015001122	rcl1	100	71.123	ENSHGLG00100008718	-	100	71.123	Heterocephalus_glaber_male
ENSORLG00015001122	rcl1	100	64.439	ENSHGLG00100018010	-	100	64.439	Heterocephalus_glaber_male
ENSORLG00015001122	rcl1	100	85.753	ENSHCOG00000020170	rcl1	100	85.753	Hippocampus_comes
ENSORLG00015001122	rcl1	99	80.926	ENSIPUG00000018054	RCL1	99	80.926	Ictalurus_punctatus
ENSORLG00015001122	rcl1	100	75.668	ENSSTOG00000000023	RCL1	100	75.668	Ictidomys_tridecemlineatus
ENSORLG00015001122	rcl1	99	77.507	ENSJJAG00000022803	-	99	77.507	Jaculus_jaculus
ENSORLG00015001122	rcl1	58	60.396	ENSJJAG00000000764	-	98	60.396	Jaculus_jaculus
ENSORLG00015001122	rcl1	99	68.293	ENSJJAG00000015632	-	99	68.293	Jaculus_jaculus
ENSORLG00015001122	rcl1	100	88.710	ENSKMAG00000011946	rcl1	100	88.710	Kryptolebias_marmoratus
ENSORLG00015001122	rcl1	100	81.452	ENSLBEG00000003957	rcl1	100	81.452	Labrus_bergylta
ENSORLG00015001122	rcl1	93	71.965	ENSLACG00000004594	RCL1	100	76.087	Latimeria_chalumnae
ENSORLG00015001122	rcl1	100	78.226	ENSLOCG00000010148	rcl1	98	78.226	Lepisosteus_oculatus
ENSORLG00015001122	rcl1	99	74.865	ENSLAFG00000017495	RCL1	99	74.865	Loxodonta_africana
ENSORLG00015001122	rcl1	100	76.203	ENSMFAG00000037906	RCL1	100	76.203	Macaca_fascicularis
ENSORLG00015001122	rcl1	100	76.203	ENSMNEG00000012288	RCL1	100	76.203	Macaca_nemestrina
ENSORLG00015001122	rcl1	100	76.203	ENSMLEG00000043088	RCL1	100	76.203	Mandrillus_leucophaeus
ENSORLG00015001122	rcl1	100	86.559	ENSMAMG00000008311	rcl1	100	86.559	Mastacembelus_armatus
ENSORLG00015001122	rcl1	100	86.559	ENSMZEG00005017292	rcl1	100	86.559	Maylandia_zebra
ENSORLG00015001122	rcl1	62	70.909	ENSMGAG00000002245	RCL1	100	70.909	Meleagris_gallopavo
ENSORLG00015001122	rcl1	62	79.630	ENSMAUG00000008922	Rcl1	100	79.630	Mesocricetus_auratus
ENSORLG00015001122	rcl1	100	76.738	ENSMICG00000015562	RCL1	100	76.738	Microcebus_murinus
ENSORLG00015001122	rcl1	100	76.738	ENSMOCG00000012145	Rcl1	100	76.738	Microtus_ochrogaster
ENSORLG00015001122	rcl1	100	83.914	ENSMMOG00000021264	rcl1	100	83.914	Mola_mola
ENSORLG00015001122	rcl1	95	75.281	ENSMODG00000015377	RCL1	94	75.281	Monodelphis_domestica
ENSORLG00015001122	rcl1	100	86.022	ENSMALG00000018618	rcl1	100	86.022	Monopterus_albus
ENSORLG00015001122	rcl1	100	76.738	MGP_CAROLIEiJ_G0022853	Rcl1	100	76.738	Mus_caroli
ENSORLG00015001122	rcl1	100	76.203	ENSMUSG00000024785	Rcl1	100	76.203	Mus_musculus
ENSORLG00015001122	rcl1	100	77.005	MGP_PahariEiJ_G0014346	Rcl1	100	79.532	Mus_pahari
ENSORLG00015001122	rcl1	100	76.203	MGP_SPRETEiJ_G0023771	Rcl1	100	78.947	Mus_spretus
ENSORLG00015001122	rcl1	100	76.471	ENSMPUG00000004998	RCL1	100	76.471	Mustela_putorius_furo
ENSORLG00015001122	rcl1	100	75.401	ENSMLUG00000009654	RCL1	100	75.401	Myotis_lucifugus
ENSORLG00015001122	rcl1	100	76.203	ENSNGAG00000015327	Rcl1	100	76.203	Nannospalax_galili
ENSORLG00015001122	rcl1	92	83.965	ENSNBRG00000019854	rcl1	99	80.441	Neolamprologus_brichardi
ENSORLG00015001122	rcl1	100	73.529	ENSNLEG00000008891	RCL1	100	73.529	Nomascus_leucogenys
ENSORLG00015001122	rcl1	100	69.251	ENSMEUG00000007653	RCL1	100	69.251	Notamacropus_eugenii
ENSORLG00015001122	rcl1	100	75.134	ENSOPRG00000010965	RCL1	100	75.134	Ochotona_princeps
ENSORLG00015001122	rcl1	88	71.148	ENSODEG00000004151	RCL1	96	71.148	Octodon_degus
ENSORLG00015001122	rcl1	100	87.366	ENSONIG00000003871	rcl1	100	87.366	Oreochromis_niloticus
ENSORLG00015001122	rcl1	66	73.494	ENSOANG00000013193	-	98	73.494	Ornithorhynchus_anatinus
ENSORLG00015001122	rcl1	100	75.936	ENSOCUG00000008161	RCL1	100	75.936	Oryctolagus_cuniculus
ENSORLG00015001122	rcl1	100	99.194	ENSORLG00000010443	rcl1	100	99.194	Oryzias_latipes
ENSORLG00015001122	rcl1	100	98.925	ENSORLG00020012211	rcl1	100	98.925	Oryzias_latipes_hni
ENSORLG00015001122	rcl1	100	96.505	ENSOMEG00000022976	rcl1	88	96.505	Oryzias_melastigma
ENSORLG00015001122	rcl1	99	76.152	ENSOGAG00000007480	RCL1	99	76.152	Otolemur_garnettii
ENSORLG00015001122	rcl1	100	75.936	ENSOARG00000013463	RCL1	100	75.936	Ovis_aries
ENSORLG00015001122	rcl1	100	76.471	ENSPPAG00000037958	RCL1	100	76.471	Pan_paniscus
ENSORLG00015001122	rcl1	100	75.401	ENSPPRG00000022645	RCL1	100	75.401	Panthera_pardus
ENSORLG00015001122	rcl1	88	76.758	ENSPTIG00000019031	RCL1	100	77.778	Panthera_tigris_altaica
ENSORLG00015001122	rcl1	100	76.203	ENSPTRG00000020743	RCL1	100	76.203	Pan_troglodytes
ENSORLG00015001122	rcl1	100	76.203	ENSPANG00000025151	RCL1	100	76.203	Papio_anubis
ENSORLG00015001122	rcl1	100	77.151	ENSPKIG00000021022	rcl1	100	77.151	Paramormyrops_kingsleyae
ENSORLG00015001122	rcl1	88	74.164	ENSPSIG00000012302	RCL1	100	74.164	Pelodiscus_sinensis
ENSORLG00015001122	rcl1	100	85.215	ENSPMGG00000024007	rcl1	100	85.215	Periophthalmus_magnuspinnatus
ENSORLG00015001122	rcl1	100	77.005	ENSPEMG00000023275	Rcl1	100	77.005	Peromyscus_maniculatus_bairdii
ENSORLG00015001122	rcl1	63	30.935	ENSPMAG00000009110	rtca	74	30.935	Petromyzon_marinus
ENSORLG00015001122	rcl1	52	68.156	ENSPMAG00000005419	-	96	67.778	Petromyzon_marinus
ENSORLG00015001122	rcl1	100	75.668	ENSPCIG00000000188	RCL1	100	75.668	Phascolarctos_cinereus
ENSORLG00015001122	rcl1	100	86.290	ENSPFOG00000019682	rcl1	99	86.290	Poecilia_formosa
ENSORLG00015001122	rcl1	100	86.290	ENSPLAG00000022354	rcl1	100	86.290	Poecilia_latipinna
ENSORLG00015001122	rcl1	100	86.290	ENSPMEG00000008131	rcl1	100	86.290	Poecilia_mexicana
ENSORLG00015001122	rcl1	100	85.753	ENSPREG00000008032	rcl1	100	85.753	Poecilia_reticulata
ENSORLG00015001122	rcl1	100	75.936	ENSPPYG00000019244	RCL1	100	75.936	Pongo_abelii
ENSORLG00015001122	rcl1	99	68.919	ENSPCAG00000001440	RCL1	99	68.919	Procavia_capensis
ENSORLG00015001122	rcl1	100	76.471	ENSPCOG00000009611	RCL1	97	79.670	Propithecus_coquereli
ENSORLG00015001122	rcl1	100	75.668	ENSPVAG00000015752	RCL1	100	75.668	Pteropus_vampyrus
ENSORLG00015001122	rcl1	100	86.828	ENSPNYG00000012910	rcl1	100	86.828	Pundamilia_nyererei
ENSORLG00015001122	rcl1	99	80.707	ENSPNAG00000028307	rcl1	91	80.707	Pygocentrus_nattereri
ENSORLG00015001122	rcl1	100	76.203	ENSRNOG00000015491	Rcl1	100	76.203	Rattus_norvegicus
ENSORLG00015001122	rcl1	100	75.936	ENSRBIG00000035818	RCL1	100	75.936	Rhinopithecus_bieti
ENSORLG00015001122	rcl1	100	76.203	ENSRROG00000029781	RCL1	100	76.203	Rhinopithecus_roxellana
ENSORLG00015001122	rcl1	98	37.838	YOL010W	-	97	37.838	Saccharomyces_cerevisiae
ENSORLG00015001122	rcl1	100	76.203	ENSSBOG00000026369	RCL1	97	79.235	Saimiri_boliviensis_boliviensis
ENSORLG00015001122	rcl1	89	76.737	ENSSHAG00000014086	RCL1	100	76.737	Sarcophilus_harrisii
ENSORLG00015001122	rcl1	100	77.151	ENSSFOG00015023020	rcl1	100	77.151	Scleropages_formosus
ENSORLG00015001122	rcl1	100	88.172	ENSSMAG00000019751	rcl1	86	88.172	Scophthalmus_maximus
ENSORLG00015001122	rcl1	100	88.172	ENSSDUG00000006349	rcl1	100	88.172	Seriola_dumerili
ENSORLG00015001122	rcl1	100	87.366	ENSSLDG00000022076	rcl1	100	87.366	Seriola_lalandi_dorsalis
ENSORLG00015001122	rcl1	100	76.203	ENSSARG00000009260	RCL1	100	76.203	Sorex_araneus
ENSORLG00015001122	rcl1	100	74.332	ENSSPUG00000016330	RCL1	100	74.332	Sphenodon_punctatus
ENSORLG00015001122	rcl1	100	88.172	ENSSPAG00000018038	rcl1	100	88.172	Stegastes_partitus
ENSORLG00015001122	rcl1	100	76.203	ENSSSCG00000005217	RCL1	83	76.203	Sus_scrofa
ENSORLG00015001122	rcl1	99	71.968	ENSTGUG00000005138	RCL1	99	71.968	Taeniopygia_guttata
ENSORLG00015001122	rcl1	100	84.946	ENSTRUG00000010493	rcl1	100	84.946	Takifugu_rubripes
ENSORLG00015001122	rcl1	100	82.796	ENSTNIG00000013214	rcl1	99	82.796	Tetraodon_nigroviridis
ENSORLG00015001122	rcl1	100	71.925	ENSTBEG00000016339	RCL1	100	71.925	Tupaia_belangeri
ENSORLG00015001122	rcl1	100	75.668	ENSTTRG00000016525	RCL1	100	75.668	Tursiops_truncatus
ENSORLG00015001122	rcl1	100	77.273	ENSUAMG00000005598	RCL1	100	78.395	Ursus_americanus
ENSORLG00015001122	rcl1	88	77.744	ENSUMAG00000017890	RCL1	97	77.744	Ursus_maritimus
ENSORLG00015001122	rcl1	88	77.439	ENSVPAG00000009188	RCL1	100	77.439	Vicugna_pacos
ENSORLG00015001122	rcl1	88	78.723	ENSVVUG00000007304	RCL1	89	78.723	Vulpes_vulpes
ENSORLG00015001122	rcl1	100	68.800	ENSXETG00000000592	rcl1	100	68.800	Xenopus_tropicalis
ENSORLG00015001122	rcl1	100	86.559	ENSXCOG00000004922	rcl1	100	86.559	Xiphophorus_couchianus
ENSORLG00015001122	rcl1	100	86.559	ENSXMAG00000022366	RCL1	100	86.559	Xiphophorus_maculatus