EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015001190 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein Ub
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9901 bases
Position: chr24:12878555-12888455
Accession: ZDB-GENE-030131-6422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015022020	SAP	PF02037.27	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015014077	-	4501	-	ENSORLP00015022020	802 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015001190	hnrnpub	75	45.289	ENSORLG00015009059	HNRNPUL1	69	45.034
ENSORLG00015001190	hnrnpub	76	33.333	ENSORLG00015016595	-	67	37.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001190	hnrnpub	86	83.333	ENSG00000153187	HNRNPU	99	65.000	Homo_sapiens
ENSORLG00015001190	hnrnpub	100	83.663	ENSAPOG00000017400	hnrnpub	100	82.054	Acanthochromis_polyacanthus
ENSORLG00015001190	hnrnpub	86	83.333	ENSAMEG00000009145	HNRNPU	77	78.261	Ailuropoda_melanoleuca
ENSORLG00015001190	hnrnpub	98	77.472	ENSACIG00000012138	hnrnpub	100	79.583	Amphilophus_citrinellus
ENSORLG00015001190	hnrnpub	100	85.130	ENSAOCG00000015843	hnrnpub	100	82.426	Amphiprion_ocellaris
ENSORLG00015001190	hnrnpub	100	85.130	ENSAPEG00000014679	hnrnpub	100	82.426	Amphiprion_percula
ENSORLG00015001190	hnrnpub	98	85.660	ENSATEG00000016178	hnrnpub	97	85.535	Anabas_testudineus
ENSORLG00015001190	hnrnpub	88	68.750	ENSACAG00000004511	HNRNPU	78	68.750	Anolis_carolinensis
ENSORLG00015001190	hnrnpub	99	49.594	ENSANAG00000033895	-	79	60.345	Aotus_nancymaae
ENSORLG00015001190	hnrnpub	100	82.695	ENSACLG00000008165	hnrnpub	100	81.165	Astatotilapia_calliptera
ENSORLG00015001190	hnrnpub	86	83.333	ENSBTAG00000007606	HNRNPU	79	78.261	Bos_taurus
ENSORLG00015001190	hnrnpub	86	83.333	ENSCJAG00000016914	HNRNPU	79	78.261	Callithrix_jacchus
ENSORLG00015001190	hnrnpub	80	54.955	ENSCAFG00020000918	HNRNPU	75	57.612	Canis_lupus_dingo
ENSORLG00015001190	hnrnpub	80	56.811	ENSCHIG00000004900	HNRNPU	75	56.781	Capra_hircus
ENSORLG00015001190	hnrnpub	86	85.714	ENSCPOG00000011887	HNRNPU	79	80.435	Cavia_porcellus
ENSORLG00015001190	hnrnpub	86	83.333	ENSCCAG00000037859	-	79	78.261	Cebus_capucinus
ENSORLG00015001190	hnrnpub	86	83.333	ENSCATG00000035273	HNRNPU	79	78.261	Cercocebus_atys
ENSORLG00015001190	hnrnpub	86	85.714	ENSCLAG00000007100	HNRNPU	79	80.435	Chinchilla_lanigera
ENSORLG00015001190	hnrnpub	80	55.046	ENSCSAG00000009219	HNRNPU	75	56.801	Chlorocebus_sabaeus
ENSORLG00015001190	hnrnpub	86	83.333	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSORLG00015001190	hnrnpub	94	56.483	ENSCPBG00000009415	HNRNPU	79	68.966	Chrysemys_picta_bellii
ENSORLG00015001190	hnrnpub	86	83.333	ENSCANG00000022780	HNRNPU	77	78.261	Colobus_angolensis_palliatus
ENSORLG00015001190	hnrnpub	88	83.721	ENSCGRG00001020525	Hnrnpu	81	83.721	Cricetulus_griseus_chok1gshd
ENSORLG00015001190	hnrnpub	100	75.718	ENSCSEG00000010804	hnrnpub	100	76.038	Cynoglossus_semilaevis
ENSORLG00015001190	hnrnpub	88	76.786	ENSCVAG00000004280	hnrnpub	100	73.645	Cyprinodon_variegatus
ENSORLG00015001190	hnrnpub	100	59.562	ENSDARG00000015206	hnrnpua	84	62.003	Danio_rerio
ENSORLG00015001190	hnrnpub	100	61.928	ENSDARG00000004735	hnrnpub	100	60.723	Danio_rerio
ENSORLG00015001190	hnrnpub	99	51.916	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSORLG00015001190	hnrnpub	80	54.655	ENSDORG00000015491	Hnrnpu	74	57.515	Dipodomys_ordii
ENSORLG00015001190	hnrnpub	80	56.502	ENSETEG00000014565	HNRNPU	78	78.261	Echinops_telfairi
ENSORLG00015001190	hnrnpub	81	56.469	ENSEASG00005003017	HNRNPU	75	57.418	Equus_asinus_asinus
ENSORLG00015001190	hnrnpub	81	56.317	ENSECAG00000007955	HNRNPU	75	57.270	Equus_caballus
ENSORLG00015001190	hnrnpub	100	69.803	ENSELUG00000010733	hnrnpub	100	71.749	Esox_lucius
ENSORLG00015001190	hnrnpub	100	57.178	ENSELUG00000011966	hnrnpua	100	56.010	Esox_lucius
ENSORLG00015001190	hnrnpub	80	54.505	ENSFCAG00000002156	HNRNPU	74	57.313	Felis_catus
ENSORLG00015001190	hnrnpub	90	85.714	ENSFDAG00000006026	HNRNPU	99	80.435	Fukomys_damarensis
ENSORLG00015001190	hnrnpub	100	81.774	ENSFHEG00000022639	hnrnpub	100	82.989	Fundulus_heteroclitus
ENSORLG00015001190	hnrnpub	100	69.748	ENSGMOG00000001755	hnrnpub	99	70.072	Gadus_morhua
ENSORLG00015001190	hnrnpub	87	71.930	ENSGALG00000010671	HNRNPU	78	71.930	Gallus_gallus
ENSORLG00015001190	hnrnpub	100	80.216	ENSGAFG00000009369	hnrnpub	100	80.096	Gambusia_affinis
ENSORLG00015001190	hnrnpub	100	69.108	ENSGACG00000004679	hnrnpub	99	72.254	Gasterosteus_aculeatus
ENSORLG00015001190	hnrnpub	86	83.333	ENSGGOG00000004061	HNRNPU	79	78.261	Gorilla_gorilla
ENSORLG00015001190	hnrnpub	100	82.818	ENSHBUG00000012290	hnrnpub	100	81.289	Haplochromis_burtoni
ENSORLG00015001190	hnrnpub	86	85.714	ENSHGLG00000010594	-	76	80.435	Heterocephalus_glaber_female
ENSORLG00015001190	hnrnpub	91	85.714	ENSHGLG00100015093	HNRNPU	99	80.435	Heterocephalus_glaber_male
ENSORLG00015001190	hnrnpub	100	72.082	ENSHCOG00000020091	hnrnpub	83	79.446	Hippocampus_comes
ENSORLG00015001190	hnrnpub	78	89.362	ENSIPUG00000007749	hnrnpu	91	81.481	Ictalurus_punctatus
ENSORLG00015001190	hnrnpub	86	83.721	ENSJJAG00000011371	Hnrnpu	79	83.721	Jaculus_jaculus
ENSORLG00015001190	hnrnpub	100	80.098	ENSKMAG00000004532	hnrnpub	100	81.074	Kryptolebias_marmoratus
ENSORLG00015001190	hnrnpub	100	80.929	ENSLBEG00000022520	hnrnpub	100	81.418	Labrus_bergylta
ENSORLG00015001190	hnrnpub	82	51.891	ENSLACG00000017463	HNRNPU	74	52.266	Latimeria_chalumnae
ENSORLG00015001190	hnrnpub	89	91.489	ENSLOCG00000016652	hnrnpua	78	91.489	Lepisosteus_oculatus
ENSORLG00015001190	hnrnpub	87	83.333	ENSLAFG00000021377	HNRNPU	79	78.261	Loxodonta_africana
ENSORLG00015001190	hnrnpub	86	83.333	ENSMFAG00000037308	HNRNPU	79	78.261	Macaca_fascicularis
ENSORLG00015001190	hnrnpub	80	55.046	ENSMMUG00000021098	HNRNPU	75	56.801	Macaca_mulatta
ENSORLG00015001190	hnrnpub	86	83.333	ENSMNEG00000043645	HNRNPU	79	78.261	Macaca_nemestrina
ENSORLG00015001190	hnrnpub	100	87.221	ENSMAMG00000007196	hnrnpub	100	86.725	Mastacembelus_armatus
ENSORLG00015001190	hnrnpub	100	82.695	ENSMZEG00005003185	hnrnpub	100	81.165	Maylandia_zebra
ENSORLG00015001190	hnrnpub	88	83.721	ENSMAUG00000008842	Hnrnpu	79	83.721	Mesocricetus_auratus
ENSORLG00015001190	hnrnpub	86	83.333	ENSMICG00000004616	HNRNPU	79	78.261	Microcebus_murinus
ENSORLG00015001190	hnrnpub	88	83.721	ENSMOCG00000015623	Hnrnpu	81	83.721	Microtus_ochrogaster
ENSORLG00015001190	hnrnpub	87	67.273	ENSMODG00000006515	HNRNPU	78	78.261	Monodelphis_domestica
ENSORLG00015001190	hnrnpub	96	84.794	ENSMALG00000018243	hnrnpub	99	84.278	Monopterus_albus
ENSORLG00015001190	hnrnpub	80	55.708	MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.418	Mus_caroli
ENSORLG00015001190	hnrnpub	86	83.721	MGP_PahariEiJ_G0028193	Hnrnpu	80	83.721	Mus_pahari
ENSORLG00015001190	hnrnpub	87	80.952	ENSMLUG00000000475	HNRNPU	80	76.087	Myotis_lucifugus
ENSORLG00015001190	hnrnpub	99	49.318	ENSNGAG00000019075	Hnrnpu	81	83.721	Nannospalax_galili
ENSORLG00015001190	hnrnpub	100	82.695	ENSNBRG00000017855	hnrnpub	100	81.165	Neolamprologus_brichardi
ENSORLG00015001190	hnrnpub	80	67.273	ENSMEUG00000000541	HNRNPU	77	78.261	Notamacropus_eugenii
ENSORLG00015001190	hnrnpub	100	81.943	ENSONIG00000001260	hnrnpub	100	80.697	Oreochromis_niloticus
ENSORLG00015001190	hnrnpub	78	83.333	ENSOCUG00000014469	HNRNPU	69	78.261	Oryctolagus_cuniculus
ENSORLG00015001190	hnrnpub	100	99.252	ENSORLG00000016114	hnrnpub	100	99.252	Oryzias_latipes
ENSORLG00015001190	hnrnpub	100	99.751	ENSORLG00020005363	hnrnpub	100	99.751	Oryzias_latipes_hni
ENSORLG00015001190	hnrnpub	100	93.026	ENSOMEG00000014951	hnrnpub	100	92.528	Oryzias_melastigma
ENSORLG00015001190	hnrnpub	80	56.811	ENSOGAG00000014024	HNRNPU	75	57.612	Otolemur_garnettii
ENSORLG00015001190	hnrnpub	86	83.333	ENSOARG00000004985	HNRNPU	85	78.261	Ovis_aries
ENSORLG00015001190	hnrnpub	86	83.333	ENSPPAG00000038652	HNRNPU	79	78.261	Pan_paniscus
ENSORLG00015001190	hnrnpub	88	83.333	ENSPPRG00000002662	HNRNPU	83	57.377	Panthera_pardus
ENSORLG00015001190	hnrnpub	86	83.333	ENSPTRG00000002182	HNRNPU	79	78.261	Pan_troglodytes
ENSORLG00015001190	hnrnpub	80	55.046	ENSPANG00000011643	HNRNPU	79	60.345	Papio_anubis
ENSORLG00015001190	hnrnpub	100	64.862	ENSPKIG00000006885	hnrnpua	81	69.617	Paramormyrops_kingsleyae
ENSORLG00015001190	hnrnpub	100	66.828	ENSPKIG00000022332	hnrnpub	100	65.542	Paramormyrops_kingsleyae
ENSORLG00015001190	hnrnpub	86	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSORLG00015001190	hnrnpub	100	81.540	ENSPFOG00000002908	hnrnpub	100	81.296	Poecilia_formosa
ENSORLG00015001190	hnrnpub	100	82.007	ENSPLAG00000004160	hnrnpub	100	81.395	Poecilia_latipinna
ENSORLG00015001190	hnrnpub	86	83.333	ENSPCOG00000018655	-	79	78.261	Propithecus_coquereli
ENSORLG00015001190	hnrnpub	80	55.969	ENSPCOG00000003883	-	77	55.522	Propithecus_coquereli
ENSORLG00015001190	hnrnpub	86	83.333	ENSPVAG00000002581	HNRNPU	79	78.261	Pteropus_vampyrus
ENSORLG00015001190	hnrnpub	100	82.942	ENSPNYG00000021642	hnrnpub	100	81.413	Pundamilia_nyererei
ENSORLG00015001190	hnrnpub	100	65.981	ENSPNAG00000001055	hnrnpub	83	68.795	Pygocentrus_nattereri
ENSORLG00015001190	hnrnpub	80	54.434	ENSRBIG00000031519	HNRNPU	78	59.655	Rhinopithecus_bieti
ENSORLG00015001190	hnrnpub	83	53.712	ENSRROG00000041642	HNRNPU	76	61.199	Rhinopithecus_roxellana
ENSORLG00015001190	hnrnpub	100	65.983	ENSSFOG00015001124	hnrnpub	81	72.182	Scleropages_formosus
ENSORLG00015001190	hnrnpub	100	64.790	ENSSFOG00015019004	hnrnpu	79	70.675	Scleropages_formosus
ENSORLG00015001190	hnrnpub	85	86.938	ENSSMAG00000003607	hnrnpub	100	79.429	Scophthalmus_maximus
ENSORLG00015001190	hnrnpub	100	85.662	ENSSDUG00000005912	hnrnpub	100	86.275	Seriola_dumerili
ENSORLG00015001190	hnrnpub	100	85.348	ENSSLDG00000004899	hnrnpub	100	86.081	Seriola_lalandi_dorsalis
ENSORLG00015001190	hnrnpub	88	82.927	ENSSPUG00000011393	HNRNPU	80	74.000	Sphenodon_punctatus
ENSORLG00015001190	hnrnpub	100	84.015	ENSSPAG00000011853	hnrnpub	100	83.168	Stegastes_partitus
ENSORLG00015001190	hnrnpub	86	83.333	ENSSSCG00000010877	HNRNPU	79	78.261	Sus_scrofa
ENSORLG00015001190	hnrnpub	100	77.007	ENSTRUG00000007759	hnrnpub	83	83.748	Takifugu_rubripes
ENSORLG00015001190	hnrnpub	86	83.333	ENSUAMG00000021120	HNRNPU	99	52.232	Ursus_americanus
ENSORLG00015001190	hnrnpub	86	74.419	ENSUMAG00000012322	HNRNPU	81	74.419	Ursus_maritimus
ENSORLG00015001190	hnrnpub	79	83.333	ENSVPAG00000010520	HNRNPU	82	78.261	Vicugna_pacos
ENSORLG00015001190	hnrnpub	80	54.955	ENSVVUG00000026524	HNRNPU	75	57.612	Vulpes_vulpes
ENSORLG00015001190	hnrnpub	99	49.072	ENSXETG00000011386	hnrnpu	77	52.693	Xenopus_tropicalis
ENSORLG00015001190	hnrnpub	100	81.197	ENSXMAG00000010356	hnrnpub	100	81.197	Xiphophorus_maculatus