EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015001519 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: -
Full Name: zgc:162730
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 4270 bases
Position: chr13:18018722-18022991
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015000917	zf-CCCH	PF00642.24	3.9e-20	1	2
ENSORLP00015000917	zf-CCCH	PF00642.24	3.9e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015013505	-	2843	-	ENSORLP00015000917	413 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001519	zgc:162730	100	67.447	ENSAPOG00000014920	zgc:162730	99	66.042	Acanthochromis_polyacanthus
ENSORLG00015001519	zgc:162730	58	59.167	ENSACIG00000017366	zgc:162730	97	56.667	Amphilophus_citrinellus
ENSORLG00015001519	zgc:162730	100	66.511	ENSAOCG00000002001	zgc:162730	99	65.808	Amphiprion_ocellaris
ENSORLG00015001519	zgc:162730	87	68.011	ENSAPEG00000015490	zgc:162730	99	65.679	Amphiprion_percula
ENSORLG00015001519	zgc:162730	100	61.305	ENSATEG00000008790	zgc:162730	99	60.606	Anabas_testudineus
ENSORLG00015001519	zgc:162730	100	60.798	ENSACLG00000022112	zgc:162730	99	61.033	Astatotilapia_calliptera
ENSORLG00015001519	zgc:162730	83	44.444	ENSAMXG00000035945	zgc:162730	84	44.737	Astyanax_mexicanus
ENSORLG00015001519	zgc:162730	99	59.338	ENSCSEG00000018283	zgc:162730	99	54.567	Cynoglossus_semilaevis
ENSORLG00015001519	zgc:162730	100	62.322	ENSCVAG00000018571	zgc:162730	99	60.377	Cyprinodon_variegatus
ENSORLG00015001519	zgc:162730	66	51.636	ENSDARG00000103720	zgc:162730	85	45.906	Danio_rerio
ENSORLG00015001519	zgc:162730	68	35.395	ENSDARG00000040725	zgc:114130	57	37.255	Danio_rerio
ENSORLG00015001519	zgc:162730	100	47.518	ENSELUG00000013158	zgc:162730	99	47.059	Esox_lucius
ENSORLG00015001519	zgc:162730	68	37.063	ENSELUG00000013151	zgc:114130	56	36.965	Esox_lucius
ENSORLG00015001519	zgc:162730	99	63.246	ENSFHEG00000013710	zgc:162730	99	61.575	Fundulus_heteroclitus
ENSORLG00015001519	zgc:162730	79	60.060	ENSGMOG00000017242	zgc:162730	99	58.559	Gadus_morhua
ENSORLG00015001519	zgc:162730	100	63.443	ENSGAFG00000009953	zgc:162730	99	61.792	Gambusia_affinis
ENSORLG00015001519	zgc:162730	79	62.687	ENSGACG00000008351	zgc:162730	99	60.180	Gasterosteus_aculeatus
ENSORLG00015001519	zgc:162730	100	60.798	ENSHBUG00000015057	zgc:162730	99	61.502	Haplochromis_burtoni
ENSORLG00015001519	zgc:162730	100	60.880	ENSHCOG00000015801	zgc:162730	99	59.259	Hippocampus_comes
ENSORLG00015001519	zgc:162730	99	39.329	ENSIPUG00000018248	zgc:162730	84	42.407	Ictalurus_punctatus
ENSORLG00015001519	zgc:162730	100	62.998	ENSKMAG00000019277	zgc:162730	99	62.763	Kryptolebias_marmoratus
ENSORLG00015001519	zgc:162730	100	59.028	ENSLBEG00000018380	zgc:162730	99	57.407	Labrus_bergylta
ENSORLG00015001519	zgc:162730	99	36.175	ENSLACG00000015732	sb:cb81	59	37.849	Latimeria_chalumnae
ENSORLG00015001519	zgc:162730	65	38.235	ENSLOCG00000013957	zfp36l1a	61	38.545	Lepisosteus_oculatus
ENSORLG00015001519	zgc:162730	79	45.562	ENSLOCG00000014597	zgc:162730	79	47.337	Lepisosteus_oculatus
ENSORLG00015001519	zgc:162730	99	38.263	ENSLOCG00000014587	sb:cb81	61	42.529	Lepisosteus_oculatus
ENSORLG00015001519	zgc:162730	100	60.930	ENSMAMG00000007516	zgc:162730	98	60.698	Mastacembelus_armatus
ENSORLG00015001519	zgc:162730	100	56.522	ENSMZEG00005014415	zgc:162730	99	56.280	Maylandia_zebra
ENSORLG00015001519	zgc:162730	59	62.903	ENSMMOG00000011506	zgc:162730	99	62.000	Mola_mola
ENSORLG00015001519	zgc:162730	100	59.861	ENSMALG00000002348	zgc:162730	99	60.325	Monopterus_albus
ENSORLG00015001519	zgc:162730	100	60.798	ENSNBRG00000013701	zgc:162730	99	61.502	Neolamprologus_brichardi
ENSORLG00015001519	zgc:162730	83	58.382	ENSONIG00000005003	zgc:162730	99	59.040	Oreochromis_niloticus
ENSORLG00015001519	zgc:162730	100	97.579	ENSORLG00000027149	zgc:162730	100	97.579	Oryzias_latipes
ENSORLG00015001519	zgc:162730	100	98.063	ENSORLG00020020289	zgc:162730	100	98.063	Oryzias_latipes_hni
ENSORLG00015001519	zgc:162730	100	80.288	ENSOMEG00000017752	zgc:162730	100	82.692	Oryzias_melastigma
ENSORLG00015001519	zgc:162730	100	61.792	ENSPFOG00000003665	zgc:162730	99	63.265	Poecilia_formosa
ENSORLG00015001519	zgc:162730	100	61.557	ENSPLAG00000000946	zgc:162730	99	61.085	Poecilia_latipinna
ENSORLG00015001519	zgc:162730	61	38.376	ENSPMEG00000015335	zgc:114130	58	38.376	Poecilia_mexicana
ENSORLG00015001519	zgc:162730	100	62.500	ENSPMEG00000000341	zgc:162730	99	62.028	Poecilia_mexicana
ENSORLG00015001519	zgc:162730	100	62.500	ENSPREG00000021263	zgc:162730	99	62.028	Poecilia_reticulata
ENSORLG00015001519	zgc:162730	100	60.798	ENSPNYG00000015553	zgc:162730	99	61.033	Pundamilia_nyererei
ENSORLG00015001519	zgc:162730	83	43.516	ENSPNAG00000023018	zgc:162730	84	43.353	Pygocentrus_nattereri
ENSORLG00015001519	zgc:162730	63	35.316	ENSPNAG00000023029	zgc:114130	51	38.605	Pygocentrus_nattereri
ENSORLG00015001519	zgc:162730	100	61.860	ENSSMAG00000018612	zgc:162730	99	60.233	Scophthalmus_maximus
ENSORLG00015001519	zgc:162730	100	63.972	ENSSDUG00000002247	zgc:162730	99	62.356	Seriola_dumerili
ENSORLG00015001519	zgc:162730	100	63.510	ENSSLDG00000008502	zgc:162730	99	61.894	Seriola_lalandi_dorsalis
ENSORLG00015001519	zgc:162730	100	66.511	ENSSPAG00000006851	zgc:162730	99	64.871	Stegastes_partitus
ENSORLG00015001519	zgc:162730	100	59.765	ENSTRUG00000021229	zgc:162730	99	59.529	Takifugu_rubripes
ENSORLG00015001519	zgc:162730	95	56.296	ENSTNIG00000000183	zgc:162730	98	57.284	Tetraodon_nigroviridis
ENSORLG00015001519	zgc:162730	100	63.443	ENSXCOG00000012791	zgc:162730	99	61.792	Xiphophorus_couchianus
ENSORLG00015001519	zgc:162730	100	63.443	ENSXMAG00000018206	zgc:162730	99	61.792	Xiphophorus_maculatus