EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015001525 (Gene tree)
Gene ID: -
Gene Symbol: rc3h2
Alias: -
Full Name: roquin-2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 26337 bases
Position: chr12:15069915-15096251
Accession: 101170530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015000927	zf-CCCH	PF00642.24	7.3e-06	1	1
ENSORLP00015022243	zf-CCCH	PF00642.24	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015013500	-	7675	XM_023960698	ENSORLP00015000927	1143 (aa)	XP_023816466	-
ENSORLT00015013516	-	7619	XM_023960699	ENSORLP00015022243	1143 (aa)	XP_023816467	-

Gene Model

Click here to download ENSORLG00015001525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001525	rc3h2	92	56.256	ENSG00000056586	RC3H2	94	87.528	Homo_sapiens
ENSORLG00015001525	rc3h2	100	84.356	ENSAPOG00000002117	rc3h2	100	84.443	Acanthochromis_polyacanthus
ENSORLG00015001525	rc3h2	92	56.394	ENSAMEG00000006498	RC3H2	91	56.394	Ailuropoda_melanoleuca
ENSORLG00015001525	rc3h2	100	84.443	ENSAPEG00000007757	rc3h2	100	84.529	Amphiprion_percula
ENSORLG00015001525	rc3h2	100	81.976	ENSATEG00000019414	rc3h2	100	81.976	Anabas_testudineus
ENSORLG00015001525	rc3h2	92	56.533	ENSAPLG00000013920	RC3H2	91	56.610	Anas_platyrhynchos
ENSORLG00015001525	rc3h2	92	56.344	ENSANAG00000030862	RC3H2	94	87.528	Aotus_nancymaae
ENSORLG00015001525	rc3h2	100	80.463	ENSACLG00000023136	rc3h2	100	79.863	Astatotilapia_calliptera
ENSORLG00015001525	rc3h2	95	65.435	ENSAMXG00000006778	rc3h2	100	66.507	Astyanax_mexicanus
ENSORLG00015001525	rc3h2	92	56.456	ENSBTAG00000023867	RC3H2	91	56.584	Bos_taurus
ENSORLG00015001525	rc3h2	92	56.344	ENSCJAG00000020050	RC3H2	94	87.528	Callithrix_jacchus
ENSORLG00015001525	rc3h2	92	56.356	ENSCAFG00020015288	RC3H2	94	87.528	Canis_lupus_dingo
ENSORLG00015001525	rc3h2	92	56.100	ENSCHIG00000019319	RC3H2	91	56.317	Capra_hircus
ENSORLG00015001525	rc3h2	84	50.542	ENSCAPG00000017086	RC3H2	93	50.343	Cavia_aperea
ENSORLG00015001525	rc3h2	92	56.278	ENSCPOG00000008511	RC3H2	91	56.189	Cavia_porcellus
ENSORLG00015001525	rc3h2	92	56.622	ENSCCAG00000001404	RC3H2	94	87.528	Cebus_capucinus
ENSORLG00015001525	rc3h2	92	56.256	ENSCATG00000036655	RC3H2	94	87.528	Cercocebus_atys
ENSORLG00015001525	rc3h2	92	56.217	ENSCLAG00000013261	RC3H2	91	56.039	Chinchilla_lanigera
ENSORLG00015001525	rc3h2	80	53.307	ENSCSAG00000013416	RC3H2	90	53.059	Chlorocebus_sabaeus
ENSORLG00015001525	rc3h2	92	55.882	ENSCPBG00000009811	RC3H2	91	56.050	Chrysemys_picta_bellii
ENSORLG00015001525	rc3h2	92	56.256	ENSCANG00000043140	RC3H2	94	87.528	Colobus_angolensis_palliatus
ENSORLG00015001525	rc3h2	93	55.771	ENSCGRG00001010006	Rc3h2	92	55.771	Cricetulus_griseus_chok1gshd
ENSORLG00015001525	rc3h2	71	62.648	ENSCGRG00000009255	Rc3h2	77	62.766	Cricetulus_griseus_crigri
ENSORLG00015001525	rc3h2	100	77.455	ENSCSEG00000017460	rc3h2	100	77.455	Cynoglossus_semilaevis
ENSORLG00015001525	rc3h2	99	76.522	ENSCVAG00000012202	rc3h2	100	76.783	Cyprinodon_variegatus
ENSORLG00015001525	rc3h2	99	61.592	ENSDARG00000063050	rc3h2	100	61.580	Danio_rerio
ENSORLG00015001525	rc3h2	92	56.089	ENSDNOG00000014557	RC3H2	91	56.178	Dasypus_novemcinctus
ENSORLG00015001525	rc3h2	93	56.162	ENSDORG00000006398	Rc3h2	92	56.074	Dipodomys_ordii
ENSORLG00015001525	rc3h2	92	56.462	ENSEASG00005020897	RC3H2	94	82.851	Equus_asinus_asinus
ENSORLG00015001525	rc3h2	92	56.851	ENSECAG00000022176	RC3H2	91	56.762	Equus_caballus
ENSORLG00015001525	rc3h2	100	68.045	ENSELUG00000006105	rc3h2	100	68.131	Esox_lucius
ENSORLG00015001525	rc3h2	92	56.495	ENSFCAG00000007375	RC3H2	91	56.495	Felis_catus
ENSORLG00015001525	rc3h2	92	56.061	ENSFALG00000002011	RC3H2	91	56.139	Ficedula_albicollis
ENSORLG00015001525	rc3h2	92	56.723	ENSFDAG00000012477	RC3H2	91	56.278	Fukomys_damarensis
ENSORLG00015001525	rc3h2	99	77.304	ENSFHEG00000012272	rc3h2	100	77.344	Fundulus_heteroclitus
ENSORLG00015001525	rc3h2	68	67.419	ENSGMOG00000016709	-	99	67.920	Gadus_morhua
ENSORLG00015001525	rc3h2	92	56.328	ENSGALG00000001253	RC3H2	91	56.406	Gallus_gallus
ENSORLG00015001525	rc3h2	96	78.170	ENSGAFG00000007679	rc3h2	100	78.170	Gambusia_affinis
ENSORLG00015001525	rc3h2	74	78.009	ENSGACG00000017369	rc3h2	100	95.249	Gasterosteus_aculeatus
ENSORLG00015001525	rc3h2	92	56.178	ENSGAGG00000018295	RC3H2	98	56.631	Gopherus_agassizii
ENSORLG00015001525	rc3h2	92	56.256	ENSGGOG00000017062	RC3H2	94	87.528	Gorilla_gorilla
ENSORLG00015001525	rc3h2	100	81.629	ENSHBUG00000003976	rc3h2	100	81.023	Haplochromis_burtoni
ENSORLG00015001525	rc3h2	92	56.406	ENSHGLG00100018015	RC3H2	91	56.228	Heterocephalus_glaber_male
ENSORLG00015001525	rc3h2	100	72.170	ENSHCOG00000003006	rc3h2	100	72.000	Hippocampus_comes
ENSORLG00015001525	rc3h2	100	56.604	ENSIPUG00000021433	rc3h2	100	57.852	Ictalurus_punctatus
ENSORLG00015001525	rc3h2	92	56.812	ENSSTOG00000010655	RC3H2	91	56.634	Ictidomys_tridecemlineatus
ENSORLG00015001525	rc3h2	92	56.378	ENSJJAG00000022376	Rc3h2	91	56.378	Jaculus_jaculus
ENSORLG00015001525	rc3h2	100	76.990	ENSKMAG00000010936	rc3h2	100	77.249	Kryptolebias_marmoratus
ENSORLG00015001525	rc3h2	99	55.386	ENSLOCG00000002894	rc3h2	96	56.222	Lepisosteus_oculatus
ENSORLG00015001525	rc3h2	92	56.472	ENSLAFG00000003521	RC3H2	91	56.599	Loxodonta_africana
ENSORLG00015001525	rc3h2	89	87.330	ENSMFAG00000035621	RC3H2	94	87.528	Macaca_fascicularis
ENSORLG00015001525	rc3h2	92	56.356	ENSMMUG00000021134	RC3H2	94	87.528	Macaca_mulatta
ENSORLG00015001525	rc3h2	92	56.256	ENSMNEG00000031599	RC3H2	94	85.301	Macaca_nemestrina
ENSORLG00015001525	rc3h2	92	56.356	ENSMLEG00000033809	RC3H2	94	87.528	Mandrillus_leucophaeus
ENSORLG00015001525	rc3h2	100	81.629	ENSMZEG00005017019	rc3h2	100	81.023	Maylandia_zebra
ENSORLG00015001525	rc3h2	92	55.752	ENSMGAG00000007984	RC3H2	91	55.830	Meleagris_gallopavo
ENSORLG00015001525	rc3h2	74	61.798	ENSMAUG00000003117	Rc3h2	83	61.415	Mesocricetus_auratus
ENSORLG00015001525	rc3h2	92	55.961	ENSMICG00000003227	RC3H2	94	87.305	Microcebus_murinus
ENSORLG00015001525	rc3h2	92	56.506	ENSMOCG00000009592	Rc3h2	91	56.328	Microtus_ochrogaster
ENSORLG00015001525	rc3h2	84	93.418	ENSMMOG00000021305	rc3h2	99	93.418	Mola_mola
ENSORLG00015001525	rc3h2	92	56.344	ENSMODG00000019725	RC3H2	76	56.472	Monodelphis_domestica
ENSORLG00015001525	rc3h2	92	56.947	MGP_CAROLIEiJ_G0023516	Rc3h2	94	87.361	Mus_caroli
ENSORLG00015001525	rc3h2	92	56.228	ENSMUSG00000075376	Rc3h2	94	87.361	Mus_musculus
ENSORLG00015001525	rc3h2	92	56.228	MGP_PahariEiJ_G0024969	Rc3h2	94	87.361	Mus_pahari
ENSORLG00015001525	rc3h2	92	56.139	MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	Mus_spretus
ENSORLG00015001525	rc3h2	92	56.495	ENSMPUG00000014141	RC3H2	91	56.495	Mustela_putorius_furo
ENSORLG00015001525	rc3h2	92	56.495	ENSMLUG00000013992	RC3H2	91	56.444	Myotis_lucifugus
ENSORLG00015001525	rc3h2	100	81.629	ENSNBRG00000009276	rc3h2	100	81.023	Neolamprologus_brichardi
ENSORLG00015001525	rc3h2	92	55.575	ENSNLEG00000017204	RC3H2	94	87.528	Nomascus_leucogenys
ENSORLG00015001525	rc3h2	54	87.747	ENSMEUG00000001299	-	55	87.747	Notamacropus_eugenii
ENSORLG00015001525	rc3h2	68	56.807	ENSOPRG00000000135	RC3H2	74	57.231	Ochotona_princeps
ENSORLG00015001525	rc3h2	100	80.805	ENSONIG00000003945	rc3h2	100	80.206	Oreochromis_niloticus
ENSORLG00015001525	rc3h2	91	56.720	ENSOANG00000008194	RC3H2	99	56.849	Ornithorhynchus_anatinus
ENSORLG00015001525	rc3h2	93	56.388	ENSOCUG00000008804	RC3H2	92	56.514	Oryctolagus_cuniculus
ENSORLG00015001525	rc3h2	100	98.863	ENSORLG00000010018	rc3h2	100	98.863	Oryzias_latipes
ENSORLG00015001525	rc3h2	100	98.513	ENSORLG00020013257	rc3h2	100	98.513	Oryzias_latipes_hni
ENSORLG00015001525	rc3h2	100	94.498	ENSOMEG00000023540	rc3h2	100	94.498	Oryzias_melastigma
ENSORLG00015001525	rc3h2	92	56.306	ENSOGAG00000010678	RC3H2	91	56.128	Otolemur_garnettii
ENSORLG00015001525	rc3h2	92	56.000	ENSOARG00000013965	RC3H2	91	56.217	Ovis_aries
ENSORLG00015001525	rc3h2	92	56.256	ENSPPAG00000036013	RC3H2	94	87.528	Pan_paniscus
ENSORLG00015001525	rc3h2	92	56.394	ENSPPRG00000008698	RC3H2	93	59.402	Panthera_pardus
ENSORLG00015001525	rc3h2	92	56.394	ENSPTIG00000014257	RC3H2	93	59.402	Panthera_tigris_altaica
ENSORLG00015001525	rc3h2	92	56.256	ENSPTRG00000021339	RC3H2	94	87.528	Pan_troglodytes
ENSORLG00015001525	rc3h2	92	54.836	ENSPANG00000025840	RC3H2	94	83.964	Papio_anubis
ENSORLG00015001525	rc3h2	99	62.969	ENSPKIG00000021910	rc3h2	96	62.707	Paramormyrops_kingsleyae
ENSORLG00015001525	rc3h2	92	55.890	ENSPSIG00000005393	RC3H2	91	56.057	Pelodiscus_sinensis
ENSORLG00015001525	rc3h2	85	93.905	ENSPMGG00000023963	rc3h2	95	93.905	Periophthalmus_magnuspinnatus
ENSORLG00015001525	rc3h2	92	56.940	ENSPEMG00000023441	Rc3h2	91	56.495	Peromyscus_maniculatus_bairdii
ENSORLG00015001525	rc3h2	89	87.557	ENSPCIG00000025559	RC3H2	90	87.557	Phascolarctos_cinereus
ENSORLG00015001525	rc3h2	97	77.887	ENSPFOG00000019699	rc3h2	100	75.766	Poecilia_formosa
ENSORLG00015001525	rc3h2	91	69.054	ENSPLAG00000005799	rc3h2	97	69.245	Poecilia_latipinna
ENSORLG00015001525	rc3h2	97	77.837	ENSPMEG00000014187	rc3h2	97	77.998	Poecilia_mexicana
ENSORLG00015001525	rc3h2	99	77.981	ENSPREG00000008979	rc3h2	100	77.981	Poecilia_reticulata
ENSORLG00015001525	rc3h2	78	75.099	ENSPCAG00000010154	RC3H2	77	75.099	Procavia_capensis
ENSORLG00015001525	rc3h2	100	80.720	ENSPNYG00000012063	rc3h2	100	80.120	Pundamilia_nyererei
ENSORLG00015001525	rc3h2	96	62.466	ENSPNAG00000017502	rc3h2	96	62.422	Pygocentrus_nattereri
ENSORLG00015001525	rc3h2	92	56.189	ENSRNOG00000009196	Rc3h2	94	56.228	Rattus_norvegicus
ENSORLG00015001525	rc3h2	92	56.533	ENSRBIG00000032579	RC3H2	94	87.528	Rhinopithecus_bieti
ENSORLG00015001525	rc3h2	92	56.444	ENSRROG00000043784	RC3H2	94	87.528	Rhinopithecus_roxellana
ENSORLG00015001525	rc3h2	92	56.039	ENSSBOG00000029100	RC3H2	94	87.528	Saimiri_boliviensis_boliviensis
ENSORLG00015001525	rc3h2	92	56.156	ENSSHAG00000007498	RC3H2	91	56.283	Sarcophilus_harrisii
ENSORLG00015001525	rc3h2	100	81.443	ENSSMAG00000020048	rc3h2	100	81.787	Scophthalmus_maximus
ENSORLG00015001525	rc3h2	100	83.506	ENSSDUG00000016022	rc3h2	100	83.592	Seriola_dumerili
ENSORLG00015001525	rc3h2	100	83.333	ENSSLDG00000016070	rc3h2	100	83.420	Seriola_lalandi_dorsalis
ENSORLG00015001525	rc3h2	92	56.078	ENSSARG00000012329	RC3H2	91	55.950	Sorex_araneus
ENSORLG00015001525	rc3h2	92	56.067	ENSSPUG00000001457	RC3H2	91	55.880	Sphenodon_punctatus
ENSORLG00015001525	rc3h2	100	84.629	ENSSPAG00000005233	rc3h2	100	84.715	Stegastes_partitus
ENSORLG00015001525	rc3h2	92	56.622	ENSSSCG00000005575	RC3H2	92	87.305	Sus_scrofa
ENSORLG00015001525	rc3h2	92	56.557	ENSTGUG00000006889	-	91	56.533	Taeniopygia_guttata
ENSORLG00015001525	rc3h2	85	73.124	ENSTNIG00000004942	rc3h2	98	72.812	Tetraodon_nigroviridis
ENSORLG00015001525	rc3h2	70	62.901	ENSTBEG00000009622	RC3H2	78	62.589	Tupaia_belangeri
ENSORLG00015001525	rc3h2	85	67.188	ENSTTRG00000016954	RC3H2	84	67.448	Tursiops_truncatus
ENSORLG00015001525	rc3h2	92	56.495	ENSUAMG00000015355	RC3H2	91	56.495	Ursus_americanus
ENSORLG00015001525	rc3h2	92	56.495	ENSUMAG00000003161	RC3H2	94	87.528	Ursus_maritimus
ENSORLG00015001525	rc3h2	92	56.444	ENSVPAG00000005994	RC3H2	91	56.356	Vicugna_pacos
ENSORLG00015001525	rc3h2	92	56.356	ENSVVUG00000009519	RC3H2	94	56.317	Vulpes_vulpes
ENSORLG00015001525	rc3h2	99	68.541	ENSXCOG00000005002	rc3h2	94	95.238	Xiphophorus_couchianus
ENSORLG00015001525	rc3h2	99	77.478	ENSXMAG00000001724	rc3h2	100	77.565	Xiphophorus_maculatus