EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015001534 (Gene tree)
Gene ID: -
Gene Symbol: urb2
Alias: -
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 19327 bases
Position: chr3:24180085-24199411
Accession: ZDB-GENE-030131-2621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015022259	Urb2	PF10441.9	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015013477	-	9783	-	ENSORLP00015022259	1617 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001534	urb2	99	34.685	ENSG00000135763	URB2	100	56.322	Homo_sapiens
ENSORLG00015001534	urb2	91	61.219	ENSAPOG00000000608	urb2	100	61.219	Acanthochromis_polyacanthus
ENSORLG00015001534	urb2	100	35.216	ENSAMEG00000009206	URB2	100	35.194	Ailuropoda_melanoleuca
ENSORLG00015001534	urb2	100	63.040	ENSAOCG00000019961	urb2	100	63.335	Amphiprion_ocellaris
ENSORLG00015001534	urb2	100	62.980	ENSAPEG00000005263	urb2	100	63.276	Amphiprion_percula
ENSORLG00015001534	urb2	100	60.957	ENSATEG00000020930	urb2	100	61.052	Anabas_testudineus
ENSORLG00015001534	urb2	97	35.359	ENSAPLG00000002998	URB2	99	35.359	Anas_platyrhynchos
ENSORLG00015001534	urb2	99	37.026	ENSACAG00000001285	URB2	99	36.905	Anolis_carolinensis
ENSORLG00015001534	urb2	99	35.076	ENSANAG00000033963	URB2	99	34.894	Aotus_nancymaae
ENSORLG00015001534	urb2	91	60.861	ENSACLG00000009254	urb2	100	60.861	Astatotilapia_calliptera
ENSORLG00015001534	urb2	99	40.693	ENSAMXG00000003474	urb2	99	40.621	Astyanax_mexicanus
ENSORLG00015001534	urb2	100	34.997	ENSBTAG00000010180	URB2	100	34.937	Bos_taurus
ENSORLG00015001534	urb2	95	57.343	ENSCJAG00000010968	URB2	99	57.343	Callithrix_jacchus
ENSORLG00015001534	urb2	99	34.124	ENSCAFG00000012118	URB2	99	34.103	Canis_familiaris
ENSORLG00015001534	urb2	93	32.875	ENSCAFG00020027217	URB2	98	32.853	Canis_lupus_dingo
ENSORLG00015001534	urb2	100	35.142	ENSCHIG00000014513	URB2	100	34.961	Capra_hircus
ENSORLG00015001534	urb2	100	35.244	ENSTSYG00000006924	URB2	100	35.063	Carlito_syrichta
ENSORLG00015001534	urb2	62	43.143	ENSCPOG00000020777	-	99	43.143	Cavia_porcellus
ENSORLG00015001534	urb2	99	35.319	ENSCCAG00000023932	URB2	99	35.137	Cebus_capucinus
ENSORLG00015001534	urb2	99	34.529	ENSCATG00000043366	URB2	99	34.447	Cercocebus_atys
ENSORLG00015001534	urb2	99	35.862	ENSCLAG00000006268	URB2	99	36.165	Chinchilla_lanigera
ENSORLG00015001534	urb2	99	34.489	ENSCSAG00000010599	URB2	99	34.407	Chlorocebus_sabaeus
ENSORLG00015001534	urb2	69	41.667	ENSCHOG00000010163	URB2	70	41.667	Choloepus_hoffmanni
ENSORLG00015001534	urb2	99	37.255	ENSCPBG00000006191	URB2	99	37.195	Chrysemys_picta_bellii
ENSORLG00015001534	urb2	99	34.428	ENSCANG00000023711	URB2	99	34.347	Colobus_angolensis_palliatus
ENSORLG00015001534	urb2	99	34.868	ENSCGRG00001009591	Urb2	99	34.629	Cricetulus_griseus_chok1gshd
ENSORLG00015001534	urb2	99	34.868	ENSCGRG00000011259	Urb2	99	34.629	Cricetulus_griseus_crigri
ENSORLG00015001534	urb2	100	52.945	ENSCSEG00000000299	urb2	100	53.065	Cynoglossus_semilaevis
ENSORLG00015001534	urb2	100	61.060	ENSCVAG00000011011	urb2	100	61.365	Cyprinodon_variegatus
ENSORLG00015001534	urb2	100	43.050	ENSDARG00000003217	urb2	100	67.308	Danio_rerio
ENSORLG00015001534	urb2	97	33.065	ENSDNOG00000043064	URB2	99	32.962	Dasypus_novemcinctus
ENSORLG00015001534	urb2	99	34.035	ENSDORG00000014975	Urb2	99	33.915	Dipodomys_ordii
ENSORLG00015001534	urb2	95	37.324	ENSETEG00000002869	URB2	95	37.324	Echinops_telfairi
ENSORLG00015001534	urb2	100	35.887	ENSEASG00005012060	URB2	100	35.925	Equus_asinus_asinus
ENSORLG00015001534	urb2	93	57.931	ENSECAG00000012338	URB2	100	57.931	Equus_caballus
ENSORLG00015001534	urb2	92	55.944	ENSEEUG00000002669	URB2	92	55.944	Erinaceus_europaeus
ENSORLG00015001534	urb2	100	47.547	ENSELUG00000014647	urb2	100	47.365	Esox_lucius
ENSORLG00015001534	urb2	99	35.198	ENSFCAG00000007662	URB2	99	35.330	Felis_catus
ENSORLG00015001534	urb2	99	36.908	ENSFALG00000003385	URB2	99	36.908	Ficedula_albicollis
ENSORLG00015001534	urb2	99	35.927	ENSFDAG00000021079	URB2	99	35.988	Fukomys_damarensis
ENSORLG00015001534	urb2	100	59.672	ENSFHEG00000010357	urb2	100	59.854	Fundulus_heteroclitus
ENSORLG00015001534	urb2	99	49.273	ENSGMOG00000012459	urb2	100	49.394	Gadus_morhua
ENSORLG00015001534	urb2	99	37.283	ENSGALG00000011101	URB2	99	37.283	Gallus_gallus
ENSORLG00015001534	urb2	100	58.156	ENSGACG00000016179	urb2	100	58.217	Gasterosteus_aculeatus
ENSORLG00015001534	urb2	99	37.761	ENSGAGG00000021879	URB2	99	37.701	Gopherus_agassizii
ENSORLG00015001534	urb2	99	34.870	ENSGGOG00000025643	URB2	99	34.809	Gorilla_gorilla
ENSORLG00015001534	urb2	100	61.703	ENSHBUG00000018469	urb2	100	61.703	Haplochromis_burtoni
ENSORLG00015001534	urb2	97	34.485	ENSHGLG00000016561	URB2	99	34.670	Heterocephalus_glaber_female
ENSORLG00015001534	urb2	99	34.979	ENSHGLG00100001838	URB2	99	34.798	Heterocephalus_glaber_male
ENSORLG00015001534	urb2	100	41.392	ENSIPUG00000020315	urb2	100	41.392	Ictalurus_punctatus
ENSORLG00015001534	urb2	99	35.910	ENSSTOG00000025323	URB2	99	35.888	Ictidomys_tridecemlineatus
ENSORLG00015001534	urb2	99	35.130	ENSJJAG00000011998	Urb2	99	34.949	Jaculus_jaculus
ENSORLG00015001534	urb2	100	63.012	ENSKMAG00000020129	urb2	100	63.259	Kryptolebias_marmoratus
ENSORLG00015001534	urb2	99	37.755	ENSLACG00000002038	URB2	99	37.867	Latimeria_chalumnae
ENSORLG00015001534	urb2	99	41.737	ENSLOCG00000015462	urb2	99	41.787	Lepisosteus_oculatus
ENSORLG00015001534	urb2	99	35.094	ENSLAFG00000012484	URB2	100	34.933	Loxodonta_africana
ENSORLG00015001534	urb2	99	34.550	ENSMFAG00000039905	URB2	99	34.468	Macaca_fascicularis
ENSORLG00015001534	urb2	99	34.590	ENSMMUG00000009509	URB2	99	34.508	Macaca_mulatta
ENSORLG00015001534	urb2	99	34.529	ENSMNEG00000038762	URB2	99	34.447	Macaca_nemestrina
ENSORLG00015001534	urb2	99	34.590	ENSMLEG00000043252	URB2	99	34.508	Mandrillus_leucophaeus
ENSORLG00015001534	urb2	100	58.830	ENSMAMG00000020365	urb2	100	59.067	Mastacembelus_armatus
ENSORLG00015001534	urb2	100	61.703	ENSMZEG00005011027	urb2	100	61.703	Maylandia_zebra
ENSORLG00015001534	urb2	93	34.958	ENSMGAG00000012073	URB2	98	35.210	Meleagris_gallopavo
ENSORLG00015001534	urb2	95	57.343	ENSMAUG00000017980	Urb2	99	57.343	Mesocricetus_auratus
ENSORLG00015001534	urb2	100	34.557	ENSMICG00000033302	URB2	100	34.777	Microcebus_murinus
ENSORLG00015001534	urb2	99	34.825	ENSMOCG00000020369	Urb2	99	34.527	Microtus_ochrogaster
ENSORLG00015001534	urb2	100	61.352	ENSMALG00000006529	urb2	100	61.352	Monopterus_albus
ENSORLG00015001534	urb2	99	34.437	ENSMUSG00000031976	Urb2	99	34.356	Mus_musculus
ENSORLG00015001534	urb2	99	35.494	ENSMPUG00000012438	URB2	99	35.373	Mustela_putorius_furo
ENSORLG00015001534	urb2	99	35.394	ENSNGAG00000016524	Urb2	99	35.433	Nannospalax_galili
ENSORLG00015001534	urb2	99	34.727	ENSNLEG00000014450	URB2	99	34.646	Nomascus_leucogenys
ENSORLG00015001534	urb2	90	44.595	ENSMEUG00000016434	URB2	92	44.595	Notamacropus_eugenii
ENSORLG00015001534	urb2	87	78.571	ENSOPRG00000009906	URB2	86	78.571	Ochotona_princeps
ENSORLG00015001534	urb2	99	35.784	ENSODEG00000005593	URB2	99	35.662	Octodon_degus
ENSORLG00015001534	urb2	100	60.171	ENSONIG00000017078	urb2	100	60.292	Oreochromis_niloticus
ENSORLG00015001534	urb2	99	34.438	ENSOANG00000013732	URB2	99	34.684	Ornithorhynchus_anatinus
ENSORLG00015001534	urb2	100	35.801	ENSOCUG00000010700	URB2	100	35.801	Oryctolagus_cuniculus
ENSORLG00015001534	urb2	100	97.341	ENSORLG00000010915	urb2	100	97.341	Oryzias_latipes
ENSORLG00015001534	urb2	100	97.835	ENSORLG00020003361	urb2	100	97.835	Oryzias_latipes_hni
ENSORLG00015001534	urb2	100	84.022	ENSOMEG00000010076	urb2	100	84.269	Oryzias_melastigma
ENSORLG00015001534	urb2	100	34.967	ENSOGAG00000003021	URB2	100	34.946	Otolemur_garnettii
ENSORLG00015001534	urb2	100	34.958	ENSOARG00000003102	URB2	100	35.018	Ovis_aries
ENSORLG00015001534	urb2	99	34.748	ENSPPAG00000040629	URB2	99	34.788	Pan_paniscus
ENSORLG00015001534	urb2	99	35.419	ENSPPRG00000012767	URB2	99	35.458	Panthera_pardus
ENSORLG00015001534	urb2	96	75.000	ENSPTIG00000012577	URB2	99	75.000	Panthera_tigris_altaica
ENSORLG00015001534	urb2	99	34.970	ENSPTRG00000002092	URB2	99	34.788	Pan_troglodytes
ENSORLG00015001534	urb2	99	33.495	ENSPANG00000002245	URB2	99	33.414	Papio_anubis
ENSORLG00015001534	urb2	99	42.866	ENSPKIG00000005787	urb2	99	43.021	Paramormyrops_kingsleyae
ENSORLG00015001534	urb2	99	37.099	ENSPSIG00000002690	URB2	99	36.920	Pelodiscus_sinensis
ENSORLG00015001534	urb2	96	33.271	ENSPEMG00000019551	Urb2	100	33.125	Peromyscus_maniculatus_bairdii
ENSORLG00015001534	urb2	99	35.740	ENSPCIG00000030071	URB2	99	35.558	Phascolarctos_cinereus
ENSORLG00015001534	urb2	100	59.890	ENSPFOG00000014330	urb2	100	59.890	Poecilia_formosa
ENSORLG00015001534	urb2	100	59.463	ENSPLAG00000014654	urb2	100	59.463	Poecilia_latipinna
ENSORLG00015001534	urb2	100	60.073	ENSPMEG00000012356	urb2	100	60.073	Poecilia_mexicana
ENSORLG00015001534	urb2	100	59.951	ENSPREG00000010268	urb2	100	60.073	Poecilia_reticulata
ENSORLG00015001534	urb2	100	34.525	ENSPPYG00000000123	URB2	100	34.504	Pongo_abelii
ENSORLG00015001534	urb2	100	35.276	ENSPCOG00000023537	URB2	100	35.376	Propithecus_coquereli
ENSORLG00015001534	urb2	99	33.615	ENSPVAG00000002108	URB2	99	33.555	Pteropus_vampyrus
ENSORLG00015001534	urb2	91	60.444	ENSPNYG00000016840	urb2	100	60.705	Pundamilia_nyererei
ENSORLG00015001534	urb2	99	41.945	ENSPNAG00000013684	urb2	99	41.945	Pygocentrus_nattereri
ENSORLG00015001534	urb2	99	34.489	ENSRNOG00000026853	Urb2	97	34.369	Rattus_norvegicus
ENSORLG00015001534	urb2	99	35.055	ENSRBIG00000037937	URB2	99	34.872	Rhinopithecus_bieti
ENSORLG00015001534	urb2	99	35.115	ENSRROG00000039854	URB2	99	34.933	Rhinopithecus_roxellana
ENSORLG00015001534	urb2	99	35.112	ENSSBOG00000023055	URB2	99	34.930	Saimiri_boliviensis_boliviensis
ENSORLG00015001534	urb2	99	35.155	ENSSHAG00000014735	URB2	99	35.094	Sarcophilus_harrisii
ENSORLG00015001534	urb2	97	44.196	ENSSFOG00015015432	urb2	98	44.099	Scleropages_formosus
ENSORLG00015001534	urb2	91	60.180	ENSSMAG00000004984	urb2	100	60.180	Scophthalmus_maximus
ENSORLG00015001534	urb2	100	62.896	ENSSDUG00000000902	urb2	100	63.189	Seriola_dumerili
ENSORLG00015001534	urb2	99	36.858	ENSSPUG00000018549	URB2	99	37.037	Sphenodon_punctatus
ENSORLG00015001534	urb2	100	63.507	ENSSPAG00000013632	urb2	100	63.507	Stegastes_partitus
ENSORLG00015001534	urb2	100	35.784	ENSSSCG00000010186	URB2	100	35.784	Sus_scrofa
ENSORLG00015001534	urb2	99	36.441	ENSTGUG00000009990	URB2	99	36.441	Taeniopygia_guttata
ENSORLG00015001534	urb2	100	53.722	ENSTRUG00000008173	urb2	100	53.722	Takifugu_rubripes
ENSORLG00015001534	urb2	95	55.233	ENSTNIG00000017689	urb2	99	55.233	Tetraodon_nigroviridis
ENSORLG00015001534	urb2	95	78.571	ENSTTRG00000014864	URB2	95	78.571	Tursiops_truncatus
ENSORLG00015001534	urb2	100	35.398	ENSUAMG00000015022	URB2	100	35.376	Ursus_americanus
ENSORLG00015001534	urb2	100	35.294	ENSUMAG00000004728	URB2	100	35.333	Ursus_maritimus
ENSORLG00015001534	urb2	53	58.333	ENSVPAG00000001750	-	51	58.333	Vicugna_pacos
ENSORLG00015001534	urb2	99	34.814	ENSVVUG00000006747	URB2	99	34.611	Vulpes_vulpes
ENSORLG00015001534	urb2	99	34.898	ENSXETG00000023331	urb2	99	34.597	Xenopus_tropicalis
ENSORLG00015001534	urb2	100	59.585	ENSXMAG00000015059	urb2	100	59.585	Xiphophorus_maculatus