EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015001680 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: -
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 22548 bases
Position: chr4:6814593-6837140
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001038	ResIII	PF04851.15	4e-10	1	1
ENSORLP00015001026	ResIII	PF04851.15	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015013319	-	2613	-	ENSORLP00015001038	870 (aa)	-	-
ENSORLT00015013338	-	2988	-	ENSORLP00015001026	964 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015001680	chd1l	62	42.545	ENSORLG00015017210	smarca5	57	40.728
ENSORLG00015001680	chd1l	53	47.248	ENSORLG00015010960	hells	69	37.184
ENSORLG00015001680	chd1l	52	32.072	ENSORLG00015002907	rad54l	68	32.072
ENSORLG00015001680	chd1l	55	30.903	ENSORLG00015010250	ercc6l2	53	31.533
ENSORLG00015001680	chd1l	56	31.296	ENSORLG00015018536	rad54b	56	31.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001680	chd1l	96	62.911	ENSG00000131778	CHD1L	100	62.379	Homo_sapiens
ENSORLG00015001680	chd1l	98	81.692	ENSAPOG00000001539	chd1l	99	82.039	Acanthochromis_polyacanthus
ENSORLG00015001680	chd1l	98	62.874	ENSAMEG00000017063	CHD1L	98	61.937	Ailuropoda_melanoleuca
ENSORLG00015001680	chd1l	96	79.388	ENSACIG00000001164	chd1l	99	79.128	Amphilophus_citrinellus
ENSORLG00015001680	chd1l	99	80.844	ENSAOCG00000014510	chd1l	93	80.338	Amphiprion_ocellaris
ENSORLG00015001680	chd1l	98	78.472	ENSAPEG00000017450	chd1l	98	78.101	Amphiprion_percula
ENSORLG00015001680	chd1l	98	77.855	ENSAPEG00000017573	chd1l	95	79.540	Amphiprion_percula
ENSORLG00015001680	chd1l	99	79.062	ENSATEG00000013058	chd1l	94	79.062	Anabas_testudineus
ENSORLG00015001680	chd1l	95	62.559	ENSAPLG00000009976	CHD1L	96	61.406	Anas_platyrhynchos
ENSORLG00015001680	chd1l	96	61.168	ENSACAG00000017686	CHD1L	98	60.268	Anolis_carolinensis
ENSORLG00015001680	chd1l	96	63.498	ENSANAG00000024347	CHD1L	97	61.818	Aotus_nancymaae
ENSORLG00015001680	chd1l	99	78.449	ENSACLG00000019304	chd1l	98	78.079	Astatotilapia_calliptera
ENSORLG00015001680	chd1l	98	62.384	ENSAMXG00000012367	chd1l	95	59.006	Astyanax_mexicanus
ENSORLG00015001680	chd1l	98	62.514	ENSBTAG00000020831	CHD1L	98	62.444	Bos_taurus
ENSORLG00015001680	chd1l	97	63.213	ENSCJAG00000002406	CHD1L	97	61.905	Callithrix_jacchus
ENSORLG00015001680	chd1l	98	60.115	ENSCAFG00000010944	CHD1L	98	59.526	Canis_familiaris
ENSORLG00015001680	chd1l	98	62.443	ENSCAFG00020020121	CHD1L	99	61.254	Canis_lupus_dingo
ENSORLG00015001680	chd1l	98	62.053	ENSCHIG00000013871	CHD1L	99	62.333	Capra_hircus
ENSORLG00015001680	chd1l	94	63.723	ENSTSYG00000003005	CHD1L	100	62.282	Carlito_syrichta
ENSORLG00015001680	chd1l	97	61.072	ENSCPOG00000009000	CHD1L	98	59.817	Cavia_porcellus
ENSORLG00015001680	chd1l	97	60.768	ENSCCAG00000036079	CHD1L	97	59.524	Cebus_capucinus
ENSORLG00015001680	chd1l	97	62.937	ENSCATG00000031044	CHD1L	97	61.407	Cercocebus_atys
ENSORLG00015001680	chd1l	98	61.829	ENSCLAG00000000880	CHD1L	99	61.926	Chinchilla_lanigera
ENSORLG00015001680	chd1l	97	62.937	ENSCSAG00000018386	CHD1L	97	61.294	Chlorocebus_sabaeus
ENSORLG00015001680	chd1l	98	62.959	ENSCPBG00000002600	CHD1L	98	63.128	Chrysemys_picta_bellii
ENSORLG00015001680	chd1l	97	62.398	ENSCANG00000020239	CHD1L	97	60.658	Colobus_angolensis_palliatus
ENSORLG00015001680	chd1l	97	63.510	ENSCGRG00001021624	Chd1l	98	62.743	Cricetulus_griseus_chok1gshd
ENSORLG00015001680	chd1l	95	63.895	ENSCGRG00000007554	Chd1l	99	63.464	Cricetulus_griseus_crigri
ENSORLG00015001680	chd1l	99	76.958	ENSCVAG00000002595	chd1l	97	76.046	Cyprinodon_variegatus
ENSORLG00015001680	chd1l	98	70.886	ENSDARG00000015471	chd1l	94	67.425	Danio_rerio
ENSORLG00015001680	chd1l	98	62.113	ENSDNOG00000019504	CHD1L	97	61.802	Dasypus_novemcinctus
ENSORLG00015001680	chd1l	96	62.354	ENSDORG00000013555	Chd1l	97	61.105	Dipodomys_ordii
ENSORLG00015001680	chd1l	89	60.638	ENSETEG00000008445	CHD1L	89	59.615	Echinops_telfairi
ENSORLG00015001680	chd1l	68	78.261	ENSEBUG00000005791	chd1l	77	78.261	Eptatretus_burgeri
ENSORLG00015001680	chd1l	97	62.791	ENSEASG00005007364	CHD1L	100	62.694	Equus_asinus_asinus
ENSORLG00015001680	chd1l	97	62.674	ENSECAG00000008915	CHD1L	100	62.455	Equus_caballus
ENSORLG00015001680	chd1l	98	61.530	ENSELUG00000016844	chd1l	93	59.025	Esox_lucius
ENSORLG00015001680	chd1l	98	61.998	ENSFCAG00000007777	CHD1L	99	61.478	Felis_catus
ENSORLG00015001680	chd1l	98	61.054	ENSFALG00000006087	CHD1L	99	59.598	Ficedula_albicollis
ENSORLG00015001680	chd1l	94	63.365	ENSFDAG00000012431	CHD1L	99	62.985	Fukomys_damarensis
ENSORLG00015001680	chd1l	99	77.107	ENSFHEG00000012420	chd1l	94	76.866	Fundulus_heteroclitus
ENSORLG00015001680	chd1l	99	62.401	ENSGALG00000015038	CHD1L	98	62.401	Gallus_gallus
ENSORLG00015001680	chd1l	98	78.966	ENSGAFG00000018198	chd1l	99	75.520	Gambusia_affinis
ENSORLG00015001680	chd1l	59	81.395	ENSGACG00000014042	chd1l	98	82.171	Gasterosteus_aculeatus
ENSORLG00015001680	chd1l	98	62.729	ENSGAGG00000014432	CHD1L	99	62.815	Gopherus_agassizii
ENSORLG00015001680	chd1l	96	62.251	ENSGGOG00000001067	CHD1L	97	60.845	Gorilla_gorilla
ENSORLG00015001680	chd1l	99	78.271	ENSHBUG00000007464	chd1l	98	79.104	Haplochromis_burtoni
ENSORLG00015001680	chd1l	97	62.194	ENSHGLG00000008933	CHD1L	98	61.206	Heterocephalus_glaber_female
ENSORLG00015001680	chd1l	94	61.217	ENSHGLG00100007155	CHD1L	99	60.279	Heterocephalus_glaber_male
ENSORLG00015001680	chd1l	96	72.385	ENSHCOG00000012787	chd1l	93	71.948	Hippocampus_comes
ENSORLG00015001680	chd1l	98	65.668	ENSIPUG00000022617	chd1l	94	63.448	Ictalurus_punctatus
ENSORLG00015001680	chd1l	98	57.714	ENSSTOG00000007032	CHD1L	98	57.353	Ictidomys_tridecemlineatus
ENSORLG00015001680	chd1l	99	78.360	ENSKMAG00000014358	chd1l	93	77.474	Kryptolebias_marmoratus
ENSORLG00015001680	chd1l	99	76.104	ENSLBEG00000023845	chd1l	97	77.939	Labrus_bergylta
ENSORLG00015001680	chd1l	98	56.902	ENSLACG00000006262	CHD1L	93	55.544	Latimeria_chalumnae
ENSORLG00015001680	chd1l	98	70.588	ENSLOCG00000010574	chd1l	93	68.349	Lepisosteus_oculatus
ENSORLG00015001680	chd1l	96	62.807	ENSLAFG00000018136	CHD1L	99	61.932	Loxodonta_africana
ENSORLG00015001680	chd1l	95	62.545	ENSMFAG00000043562	CHD1L	100	61.538	Macaca_fascicularis
ENSORLG00015001680	chd1l	97	62.821	ENSMMUG00000009024	CHD1L	97	61.294	Macaca_mulatta
ENSORLG00015001680	chd1l	97	62.821	ENSMNEG00000039905	CHD1L	97	61.294	Macaca_nemestrina
ENSORLG00015001680	chd1l	97	62.821	ENSMLEG00000030900	CHD1L	97	61.294	Mandrillus_leucophaeus
ENSORLG00015001680	chd1l	99	77.916	ENSMAMG00000012822	chd1l	99	77.294	Mastacembelus_armatus
ENSORLG00015001680	chd1l	99	78.271	ENSMZEG00005020830	chd1l	96	77.685	Maylandia_zebra
ENSORLG00015001680	chd1l	96	63.059	ENSMGAG00000014304	CHD1L	99	63.059	Meleagris_gallopavo
ENSORLG00015001680	chd1l	97	62.572	ENSMICG00000002497	CHD1L	98	61.512	Microcebus_murinus
ENSORLG00015001680	chd1l	99	62.809	ENSMOCG00000006305	Chd1l	98	62.683	Microtus_ochrogaster
ENSORLG00015001680	chd1l	98	72.748	ENSMMOG00000005964	chd1l	91	72.979	Mola_mola
ENSORLG00015001680	chd1l	98	62.372	ENSMODG00000018717	CHD1L	99	61.222	Monodelphis_domestica
ENSORLG00015001680	chd1l	98	79.792	ENSMALG00000014675	chd1l	93	77.941	Monopterus_albus
ENSORLG00015001680	chd1l	99	62.783	MGP_CAROLIEiJ_G0025401	Chd1l	98	62.543	Mus_caroli
ENSORLG00015001680	chd1l	99	61.948	ENSMUSG00000028089	Chd1l	98	62.614	Mus_musculus
ENSORLG00015001680	chd1l	98	63.908	MGP_PahariEiJ_G0026845	Chd1l	98	62.867	Mus_pahari
ENSORLG00015001680	chd1l	99	62.912	MGP_SPRETEiJ_G0026347	Chd1l	98	62.887	Mus_spretus
ENSORLG00015001680	chd1l	98	62.414	ENSMPUG00000000615	CHD1L	98	61.712	Mustela_putorius_furo
ENSORLG00015001680	chd1l	96	62.864	ENSMLUG00000007573	CHD1L	96	61.547	Myotis_lucifugus
ENSORLG00015001680	chd1l	97	58.506	ENSNGAG00000000908	Chd1l	99	57.984	Nannospalax_galili
ENSORLG00015001680	chd1l	98	76.382	ENSNBRG00000006021	chd1l	95	76.349	Neolamprologus_brichardi
ENSORLG00015001680	chd1l	97	62.121	ENSNLEG00000000179	CHD1L	97	60.613	Nomascus_leucogenys
ENSORLG00015001680	chd1l	96	54.289	ENSOPRG00000006973	CHD1L	91	64.579	Ochotona_princeps
ENSORLG00015001680	chd1l	98	57.714	ENSODEG00000002494	CHD1L	98	57.466	Octodon_degus
ENSORLG00015001680	chd1l	99	78.953	ENSONIG00000003183	chd1l	97	78.415	Oreochromis_niloticus
ENSORLG00015001680	chd1l	87	58.831	ENSOANG00000003068	CHD1L	93	60.513	Ornithorhynchus_anatinus
ENSORLG00015001680	chd1l	97	59.954	ENSOCUG00000009336	CHD1L	97	58.520	Oryctolagus_cuniculus
ENSORLG00015001680	chd1l	99	98.950	ENSORLG00000003673	chd1l	95	98.950	Oryzias_latipes
ENSORLG00015001680	chd1l	99	98.121	ENSORLG00020005123	chd1l	100	98.121	Oryzias_latipes_hni
ENSORLG00015001680	chd1l	78	91.015	ENSOMEG00000006109	chd1l	88	91.015	Oryzias_melastigma
ENSORLG00015001680	chd1l	98	62.113	ENSOGAG00000008775	CHD1L	97	61.092	Otolemur_garnettii
ENSORLG00015001680	chd1l	98	62.399	ENSOARG00000020547	CHD1L	99	63.364	Ovis_aries
ENSORLG00015001680	chd1l	98	61.343	ENSPPAG00000039193	CHD1L	99	62.317	Pan_paniscus
ENSORLG00015001680	chd1l	98	62.227	ENSPPRG00000010258	CHD1L	99	61.926	Panthera_pardus
ENSORLG00015001680	chd1l	98	61.343	ENSPTRG00000001220	CHD1L	97	61.741	Pan_troglodytes
ENSORLG00015001680	chd1l	96	62.985	ENSPANG00000009170	CHD1L	97	61.180	Papio_anubis
ENSORLG00015001680	chd1l	98	69.169	ENSPKIG00000022166	chd1l	97	68.034	Paramormyrops_kingsleyae
ENSORLG00015001680	chd1l	98	63.387	ENSPSIG00000012595	CHD1L	99	61.641	Pelodiscus_sinensis
ENSORLG00015001680	chd1l	99	61.573	ENSPEMG00000013528	Chd1l	99	60.667	Peromyscus_maniculatus_bairdii
ENSORLG00015001680	chd1l	91	63.333	ENSPCIG00000030409	CHD1L	99	62.410	Phascolarctos_cinereus
ENSORLG00015001680	chd1l	98	78.530	ENSPFOG00000015948	chd1l	94	76.931	Poecilia_formosa
ENSORLG00015001680	chd1l	98	79.564	ENSPLAG00000015145	chd1l	97	79.334	Poecilia_latipinna
ENSORLG00015001680	chd1l	98	79.099	ENSPMEG00000008720	chd1l	99	77.173	Poecilia_mexicana
ENSORLG00015001680	chd1l	98	79.118	ENSPREG00000017885	chd1l	98	78.422	Poecilia_reticulata
ENSORLG00015001680	chd1l	97	62.558	ENSPPYG00000000946	CHD1L	97	61.276	Pongo_abelii
ENSORLG00015001680	chd1l	92	56.618	ENSPCAG00000005959	CHD1L	91	56.899	Procavia_capensis
ENSORLG00015001680	chd1l	94	58.993	ENSPVAG00000006084	CHD1L	100	58.726	Pteropus_vampyrus
ENSORLG00015001680	chd1l	98	79.104	ENSPNYG00000013001	chd1l	97	79.219	Pundamilia_nyererei
ENSORLG00015001680	chd1l	98	69.540	ENSPNAG00000011881	chd1l	94	66.770	Pygocentrus_nattereri
ENSORLG00015001680	chd1l	99	62.302	ENSRNOG00000017669	Chd1l	99	61.778	Rattus_norvegicus
ENSORLG00015001680	chd1l	97	62.005	ENSRBIG00000041272	CHD1L	97	60.272	Rhinopithecus_bieti
ENSORLG00015001680	chd1l	97	62.165	ENSRROG00000041354	CHD1L	96	61.655	Rhinopithecus_roxellana
ENSORLG00015001680	chd1l	98	61.883	ENSSHAG00000017395	CHD1L	99	61.055	Sarcophilus_harrisii
ENSORLG00015001680	chd1l	98	70.541	ENSSFOG00015003649	chd1l	98	70.520	Scleropages_formosus
ENSORLG00015001680	chd1l	99	75.366	ENSSMAG00000019377	chd1l	96	75.803	Scophthalmus_maximus
ENSORLG00015001680	chd1l	96	79.331	ENSSDUG00000019831	chd1l	98	77.867	Seriola_dumerili
ENSORLG00015001680	chd1l	96	78.580	ENSSLDG00000012714	chd1l	95	79.719	Seriola_lalandi_dorsalis
ENSORLG00015001680	chd1l	97	61.182	ENSSPUG00000016865	CHD1L	98	61.416	Sphenodon_punctatus
ENSORLG00015001680	chd1l	99	79.863	ENSSPAG00000017653	chd1l	100	79.622	Stegastes_partitus
ENSORLG00015001680	chd1l	98	60.460	ENSSSCG00000006701	CHD1L	99	59.663	Sus_scrofa
ENSORLG00015001680	chd1l	96	62.441	ENSTGUG00000013392	-	100	61.187	Taeniopygia_guttata
ENSORLG00015001680	chd1l	96	67.929	ENSTNIG00000004902	chd1l	99	68.273	Tetraodon_nigroviridis
ENSORLG00015001680	chd1l	94	60.501	ENSTTRG00000011711	CHD1L	99	60.234	Tursiops_truncatus
ENSORLG00015001680	chd1l	98	62.644	ENSUAMG00000021991	CHD1L	99	61.461	Ursus_americanus
ENSORLG00015001680	chd1l	98	62.529	ENSUMAG00000009733	CHD1L	96	64.149	Ursus_maritimus
ENSORLG00015001680	chd1l	98	62.299	ENSVVUG00000007316	CHD1L	94	61.669	Vulpes_vulpes
ENSORLG00015001680	chd1l	98	74.799	ENSXCOG00000008336	chd1l	93	72.737	Xiphophorus_couchianus
ENSORLG00015001680	chd1l	98	79.378	ENSXMAG00000015898	chd1l	96	76.236	Xiphophorus_maculatus