EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015001720 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: -
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 8838 bases
Position: chr24:3974-12811
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015022375	RRM_1	PF00076.22	5.1e-32	1	2
ENSORLP00015022375	RRM_1	PF00076.22	5.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015013164	-	1896	-	ENSORLP00015022375	293 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015001720	srsf5b	62	60.989	ENSORLG00015007566	srsf4	68	60.989
ENSORLG00015001720	srsf5b	60	39.560	ENSORLG00015004857	srsf9	68	39.891
ENSORLG00015001720	srsf5b	65	41.026	ENSORLG00015015497	-	64	50.000
ENSORLG00015001720	srsf5b	99	55.482	ENSORLG00015023075	srsf5	68	69.474
ENSORLG00015001720	srsf5b	58	45.714	ENSORLG00015014384	srsf1a	68	43.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001720	srsf5b	63	81.818	ENSG00000100650	SRSF5	98	73.846	Homo_sapiens
ENSORLG00015001720	srsf5b	92	91.144	ENSAPOG00000008642	srsf5b	92	90.775	Acanthochromis_polyacanthus
ENSORLG00015001720	srsf5b	63	81.818	ENSAMEG00000014574	SRSF5	92	69.663	Ailuropoda_melanoleuca
ENSORLG00015001720	srsf5b	100	90.169	ENSACIG00000010742	srsf5b	92	90.406	Amphilophus_citrinellus
ENSORLG00015001720	srsf5b	92	90.775	ENSAOCG00000005719	srsf5b	92	90.406	Amphiprion_ocellaris
ENSORLG00015001720	srsf5b	92	90.775	ENSAPEG00000007830	srsf5b	92	90.406	Amphiprion_percula
ENSORLG00015001720	srsf5b	92	89.668	ENSATEG00000019112	srsf5b	92	89.299	Anabas_testudineus
ENSORLG00015001720	srsf5b	61	80.000	ENSAPLG00000014681	SRSF5	94	68.657	Anas_platyrhynchos
ENSORLG00015001720	srsf5b	63	82.888	ENSACAG00000005143	SRSF5	94	71.269	Anolis_carolinensis
ENSORLG00015001720	srsf5b	63	81.818	ENSANAG00000027977	-	79	88.462	Aotus_nancymaae
ENSORLG00015001720	srsf5b	100	90.169	ENSACLG00000026424	srsf5b	92	90.406	Astatotilapia_calliptera
ENSORLG00015001720	srsf5b	65	90.052	ENSAMXG00000011932	srsf5b	84	88.462	Astyanax_mexicanus
ENSORLG00015001720	srsf5b	63	81.818	ENSBTAG00000011596	SRSF5	92	69.663	Bos_taurus
ENSORLG00015001720	srsf5b	63	81.818	ENSCJAG00000014884	SRSF5	79	88.462	Callithrix_jacchus
ENSORLG00015001720	srsf5b	63	81.818	ENSCAFG00000016589	SRSF5	92	69.663	Canis_familiaris
ENSORLG00015001720	srsf5b	63	81.818	ENSCAFG00020005661	SRSF5	92	69.663	Canis_lupus_dingo
ENSORLG00015001720	srsf5b	63	81.818	ENSCHIG00000016794	SRSF5	92	69.663	Capra_hircus
ENSORLG00015001720	srsf5b	63	81.818	ENSTSYG00000007786	SRSF5	79	88.462	Carlito_syrichta
ENSORLG00015001720	srsf5b	63	81.818	ENSCAPG00000008801	SRSF5	92	64.794	Cavia_aperea
ENSORLG00015001720	srsf5b	63	81.818	ENSCCAG00000029002	SRSF5	79	88.462	Cebus_capucinus
ENSORLG00015001720	srsf5b	63	81.818	ENSCATG00000045051	SRSF5	79	88.462	Cercocebus_atys
ENSORLG00015001720	srsf5b	63	81.818	ENSCLAG00000004755	SRSF5	92	70.149	Chinchilla_lanigera
ENSORLG00015001720	srsf5b	63	81.818	ENSCSAG00000013041	SRSF5	67	80.628	Chlorocebus_sabaeus
ENSORLG00015001720	srsf5b	63	82.353	ENSCPBG00000021653	SRSF5	94	70.896	Chrysemys_picta_bellii
ENSORLG00015001720	srsf5b	63	81.818	ENSCANG00000030560	SRSF5	79	88.462	Colobus_angolensis_palliatus
ENSORLG00015001720	srsf5b	63	81.818	ENSCGRG00001015339	Srsf5	93	64.794	Cricetulus_griseus_chok1gshd
ENSORLG00015001720	srsf5b	63	81.818	ENSCGRG00000009833	Srsf5	93	64.794	Cricetulus_griseus_crigri
ENSORLG00015001720	srsf5b	85	90.400	ENSCSEG00000003801	srsf5b	91	87.640	Cynoglossus_semilaevis
ENSORLG00015001720	srsf5b	93	83.849	ENSCVAG00000017240	srsf5b	88	83.391	Cyprinodon_variegatus
ENSORLG00015001720	srsf5b	64	90.374	ENSDARG00000027734	srsf5b	90	87.692	Danio_rerio
ENSORLG00015001720	srsf5b	63	81.818	ENSDNOG00000006160	SRSF5	93	69.663	Dasypus_novemcinctus
ENSORLG00015001720	srsf5b	63	81.818	ENSDORG00000003989	Srsf5	93	64.045	Dipodomys_ordii
ENSORLG00015001720	srsf5b	63	75.806	ENSETEG00000020396	SRSF5	68	75.263	Echinops_telfairi
ENSORLG00015001720	srsf5b	65	62.245	ENSEBUG00000006229	srsf5b	89	51.812	Eptatretus_burgeri
ENSORLG00015001720	srsf5b	63	81.818	ENSEASG00005016615	SRSF5	92	69.663	Equus_asinus_asinus
ENSORLG00015001720	srsf5b	63	81.818	ENSECAG00000026873	SRSF5	90	72.727	Equus_caballus
ENSORLG00015001720	srsf5b	92	74.013	ENSELUG00000019852	srsf5b	85	84.722	Esox_lucius
ENSORLG00015001720	srsf5b	63	81.818	ENSFCAG00000008848	SRSF5	78	88.462	Felis_catus
ENSORLG00015001720	srsf5b	63	79.032	ENSFALG00000004979	SRSF5	87	61.397	Ficedula_albicollis
ENSORLG00015001720	srsf5b	63	81.818	ENSFDAG00000011562	SRSF5	99	67.808	Fukomys_damarensis
ENSORLG00015001720	srsf5b	100	86.084	ENSFHEG00000009476	srsf5b	88	89.744	Fundulus_heteroclitus
ENSORLG00015001720	srsf5b	65	76.549	ENSGMOG00000000595	srsf5b	99	76.991	Gadus_morhua
ENSORLG00015001720	srsf5b	63	78.495	ENSGALG00000009421	SRSF5	90	71.970	Gallus_gallus
ENSORLG00015001720	srsf5b	92	91.144	ENSGAFG00000002865	srsf5b	89	90.775	Gambusia_affinis
ENSORLG00015001720	srsf5b	100	66.952	ENSGACG00000007834	srsf5b	86	88.235	Gasterosteus_aculeatus
ENSORLG00015001720	srsf5b	63	82.353	ENSGAGG00000004447	SRSF5	94	70.896	Gopherus_agassizii
ENSORLG00015001720	srsf5b	63	81.818	ENSGGOG00000016462	SRSF5	79	88.462	Gorilla_gorilla
ENSORLG00015001720	srsf5b	100	89.831	ENSHBUG00000012462	srsf5b	93	94.615	Haplochromis_burtoni
ENSORLG00015001720	srsf5b	63	81.283	ENSHGLG00000010147	SRSF5	93	69.288	Heterocephalus_glaber_female
ENSORLG00015001720	srsf5b	63	81.283	ENSHGLG00100015328	SRSF5	93	69.288	Heterocephalus_glaber_male
ENSORLG00015001720	srsf5b	81	47.909	ENSHGLG00100000095	-	62	58.242	Heterocephalus_glaber_male
ENSORLG00015001720	srsf5b	65	87.500	ENSHCOG00000005592	srsf5b	92	76.753	Hippocampus_comes
ENSORLG00015001720	srsf5b	63	81.818	ENSSTOG00000020672	SRSF5	93	69.663	Ictidomys_tridecemlineatus
ENSORLG00015001720	srsf5b	63	81.818	ENSJJAG00000001688	Srsf5	92	64.045	Jaculus_jaculus
ENSORLG00015001720	srsf5b	92	91.144	ENSKMAG00000020486	srsf5b	89	90.775	Kryptolebias_marmoratus
ENSORLG00015001720	srsf5b	100	89.492	ENSLBEG00000013647	srsf5b	92	90.406	Labrus_bergylta
ENSORLG00015001720	srsf5b	63	81.183	ENSLACG00000005874	SRSF5	91	73.106	Latimeria_chalumnae
ENSORLG00015001720	srsf5b	63	85.340	ENSLOCG00000012438	srsf5b	70	82.564	Lepisosteus_oculatus
ENSORLG00015001720	srsf5b	63	81.283	ENSLAFG00000005260	SRSF5	92	69.549	Loxodonta_africana
ENSORLG00015001720	srsf5b	63	81.818	ENSMFAG00000002393	SRSF5	79	88.462	Macaca_fascicularis
ENSORLG00015001720	srsf5b	63	81.818	ENSMNEG00000030872	SRSF5	79	88.462	Macaca_nemestrina
ENSORLG00015001720	srsf5b	63	81.818	ENSMLEG00000030017	SRSF5	79	88.462	Mandrillus_leucophaeus
ENSORLG00015001720	srsf5b	87	91.732	ENSMAMG00000002673	srsf5b	92	89.668	Mastacembelus_armatus
ENSORLG00015001720	srsf5b	100	90.169	ENSMZEG00005003550	srsf5b	92	90.406	Maylandia_zebra
ENSORLG00015001720	srsf5b	50	73.469	ENSMGAG00000011835	SRSF5	92	56.140	Meleagris_gallopavo
ENSORLG00015001720	srsf5b	63	81.818	ENSMAUG00000009544	Srsf5	93	64.074	Mesocricetus_auratus
ENSORLG00015001720	srsf5b	63	81.818	ENSMICG00000037432	-	79	88.462	Microcebus_murinus
ENSORLG00015001720	srsf5b	63	81.818	ENSMOCG00000013134	Srsf5	93	64.074	Microtus_ochrogaster
ENSORLG00015001720	srsf5b	63	82.353	ENSMODG00000011362	SRSF5	94	70.522	Monodelphis_domestica
ENSORLG00015001720	srsf5b	100	87.205	ENSMALG00000021875	srsf5b	92	89.744	Monopterus_albus
ENSORLG00015001720	srsf5b	63	81.818	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSORLG00015001720	srsf5b	63	81.818	MGP_PahariEiJ_G0029659	Srsf5	93	64.794	Mus_pahari
ENSORLG00015001720	srsf5b	63	81.818	ENSMPUG00000007458	SRSF5	92	69.663	Mustela_putorius_furo
ENSORLG00015001720	srsf5b	63	81.818	ENSMLUG00000011939	SRSF5	92	64.179	Myotis_lucifugus
ENSORLG00015001720	srsf5b	63	81.818	ENSNGAG00000010073	-	93	64.045	Nannospalax_galili
ENSORLG00015001720	srsf5b	100	87.797	ENSNBRG00000001285	srsf5b	92	90.406	Neolamprologus_brichardi
ENSORLG00015001720	srsf5b	63	81.818	ENSNLEG00000001615	SRSF5	79	88.462	Nomascus_leucogenys
ENSORLG00015001720	srsf5b	63	81.818	ENSOPRG00000008286	SRSF5	92	70.260	Ochotona_princeps
ENSORLG00015001720	srsf5b	63	81.818	ENSODEG00000013469	-	93	70.149	Octodon_degus
ENSORLG00015001720	srsf5b	63	78.610	ENSODEG00000000700	-	69	78.534	Octodon_degus
ENSORLG00015001720	srsf5b	100	90.169	ENSONIG00000005759	srsf5b	92	90.406	Oreochromis_niloticus
ENSORLG00015001720	srsf5b	63	78.075	ENSOANG00000013336	SRSF5	94	66.667	Ornithorhynchus_anatinus
ENSORLG00015001720	srsf5b	63	81.818	ENSOCUG00000009274	SRSF5	91	69.663	Oryctolagus_cuniculus
ENSORLG00015001720	srsf5b	100	88.785	ENSORLG00000029854	srsf5b	100	88.785	Oryzias_latipes
ENSORLG00015001720	srsf5b	94	94.891	ENSOMEG00000020690	srsf5b	67	94.834	Oryzias_melastigma
ENSORLG00015001720	srsf5b	63	81.818	ENSOGAG00000015122	SRSF5	93	69.663	Otolemur_garnettii
ENSORLG00015001720	srsf5b	63	81.818	ENSPPAG00000029921	SRSF5	79	88.462	Pan_paniscus
ENSORLG00015001720	srsf5b	63	81.818	ENSPPRG00000012903	SRSF5	78	88.462	Panthera_pardus
ENSORLG00015001720	srsf5b	63	81.818	ENSPTIG00000018589	SRSF5	78	88.462	Panthera_tigris_altaica
ENSORLG00015001720	srsf5b	63	81.818	ENSPTRG00000006488	SRSF5	79	88.462	Pan_troglodytes
ENSORLG00015001720	srsf5b	63	81.818	ENSPANG00000021091	SRSF5	79	88.462	Papio_anubis
ENSORLG00015001720	srsf5b	63	82.353	ENSPSIG00000012522	SRSF5	94	71.161	Pelodiscus_sinensis
ENSORLG00015001720	srsf5b	63	81.818	ENSPEMG00000020173	Srsf5	93	64.794	Peromyscus_maniculatus_bairdii
ENSORLG00015001720	srsf5b	65	61.111	ENSPMAG00000007790	srsf5b	68	62.437	Petromyzon_marinus
ENSORLG00015001720	srsf5b	63	82.353	ENSPCIG00000011877	SRSF5	94	70.522	Phascolarctos_cinereus
ENSORLG00015001720	srsf5b	92	91.144	ENSPFOG00000017700	srsf5b	89	90.775	Poecilia_formosa
ENSORLG00015001720	srsf5b	92	91.513	ENSPLAG00000006480	srsf5b	89	91.144	Poecilia_latipinna
ENSORLG00015001720	srsf5b	92	91.144	ENSPMEG00000012751	srsf5b	89	90.775	Poecilia_mexicana
ENSORLG00015001720	srsf5b	92	91.144	ENSPREG00000010381	srsf5b	89	90.775	Poecilia_reticulata
ENSORLG00015001720	srsf5b	63	81.818	ENSPPYG00000005945	SRSF5	67	80.628	Pongo_abelii
ENSORLG00015001720	srsf5b	53	78.065	ENSPCAG00000004405	SRSF5	100	77.273	Procavia_capensis
ENSORLG00015001720	srsf5b	63	81.818	ENSPCOG00000014442	SRSF5	90	72.727	Propithecus_coquereli
ENSORLG00015001720	srsf5b	100	81.695	ENSPNYG00000002669	srsf5b	94	94.615	Pundamilia_nyererei
ENSORLG00015001720	srsf5b	65	89.529	ENSPNAG00000011262	srsf5b	84	87.692	Pygocentrus_nattereri
ENSORLG00015001720	srsf5b	63	81.818	ENSRNOG00000005513	Srsf5	93	64.794	Rattus_norvegicus
ENSORLG00015001720	srsf5b	63	81.818	ENSRBIG00000013003	SRSF5	79	88.462	Rhinopithecus_bieti
ENSORLG00015001720	srsf5b	63	81.818	ENSRROG00000043407	SRSF5	79	88.462	Rhinopithecus_roxellana
ENSORLG00015001720	srsf5b	63	81.818	ENSSBOG00000030784	SRSF5	79	88.462	Saimiri_boliviensis_boliviensis
ENSORLG00015001720	srsf5b	63	82.353	ENSSHAG00000002871	SRSF5	94	70.522	Sarcophilus_harrisii
ENSORLG00015001720	srsf5b	94	79.402	ENSSMAG00000019728	srsf5b	91	80.872	Scophthalmus_maximus
ENSORLG00015001720	srsf5b	90	89.734	ENSSDUG00000005766	srsf5b	92	90.494	Seriola_dumerili
ENSORLG00015001720	srsf5b	92	89.299	ENSSLDG00000023255	srsf5b	92	90.037	Seriola_lalandi_dorsalis
ENSORLG00015001720	srsf5b	63	69.355	ENSSARG00000001059	SRSF5	93	61.423	Sorex_araneus
ENSORLG00015001720	srsf5b	63	78.974	ENSSPUG00000002464	SRSF5	94	69.203	Sphenodon_punctatus
ENSORLG00015001720	srsf5b	92	91.882	ENSSPAG00000015325	srsf5b	92	91.513	Stegastes_partitus
ENSORLG00015001720	srsf5b	63	81.818	ENSSSCG00000032583	SRSF5	92	64.794	Sus_scrofa
ENSORLG00015001720	srsf5b	63	79.032	ENSTGUG00000011425	SRSF5	88	60.949	Taeniopygia_guttata
ENSORLG00015001720	srsf5b	65	90.000	ENSTRUG00000017811	srsf5b	95	75.000	Takifugu_rubripes
ENSORLG00015001720	srsf5b	95	80.505	ENSTNIG00000016411	srsf5b	95	72.028	Tetraodon_nigroviridis
ENSORLG00015001720	srsf5b	63	79.679	ENSTBEG00000001972	SRSF5	93	68.773	Tupaia_belangeri
ENSORLG00015001720	srsf5b	63	81.720	ENSTTRG00000003318	SRSF5	92	69.549	Tursiops_truncatus
ENSORLG00015001720	srsf5b	63	81.818	ENSUAMG00000014184	SRSF5	92	69.663	Ursus_americanus
ENSORLG00015001720	srsf5b	63	87.097	ENSUMAG00000009827	SRSF5	92	64.045	Ursus_maritimus
ENSORLG00015001720	srsf5b	63	81.818	ENSVPAG00000006448	SRSF5	93	69.663	Vicugna_pacos
ENSORLG00015001720	srsf5b	63	81.818	ENSVVUG00000003790	SRSF5	92	69.663	Vulpes_vulpes
ENSORLG00015001720	srsf5b	65	81.053	ENSXETG00000002211	srsf5	92	71.004	Xenopus_tropicalis
ENSORLG00015001720	srsf5b	92	82.288	ENSXCOG00000001570	srsf5b	89	87.823	Xiphophorus_couchianus
ENSORLG00015001720	srsf5b	92	91.144	ENSXMAG00000026416	srsf5b	89	90.775	Xiphophorus_maculatus