EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015001865 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAL1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 14287 bases
Position: chr21:20995250-21009536
Accession: 11102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015022483	ResIII	PF04851.15	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012910	SMARCAL1-201	6477	-	ENSORLP00015022483	893 (aa)	-	-

Gene Model

Click here to download ENSORLG00015001865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015001865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015001865	SMARCAL1	96	51.130	ENSG00000138375	SMARCAL1	99	68.323	Homo_sapiens
ENSORLG00015001865	SMARCAL1	99	74.373	ENSAPOG00000020156	SMARCAL1	99	74.591	Acanthochromis_polyacanthus
ENSORLG00015001865	SMARCAL1	92	73.697	ENSACIG00000001500	smarcal1	97	73.697	Amphilophus_citrinellus
ENSORLG00015001865	SMARCAL1	98	75.528	ENSAOCG00000014266	SMARCAL1	99	75.528	Amphiprion_ocellaris
ENSORLG00015001865	SMARCAL1	99	74.565	ENSAPEG00000015861	SMARCAL1	99	74.565	Amphiprion_percula
ENSORLG00015001865	SMARCAL1	100	73.861	ENSATEG00000020624	SMARCAL1	100	73.861	Anabas_testudineus
ENSORLG00015001865	SMARCAL1	79	61.711	ENSAPLG00000009864	SMARCAL1	74	61.591	Anas_platyrhynchos
ENSORLG00015001865	SMARCAL1	78	63.533	ENSACAG00000004612	SMARCAL1	71	63.533	Anolis_carolinensis
ENSORLG00015001865	SMARCAL1	99	72.235	ENSACLG00000015990	SMARCAL1	99	72.898	Astatotilapia_calliptera
ENSORLG00015001865	SMARCAL1	100	65.083	ENSAMXG00000003350	smarcal1	99	65.083	Astyanax_mexicanus
ENSORLG00015001865	SMARCAL1	94	61.466	ENSCPBG00000013599	SMARCAL1	85	61.466	Chrysemys_picta_bellii
ENSORLG00015001865	SMARCAL1	77	49.060	ENSCING00000009308	-	100	49.060	Ciona_intestinalis
ENSORLG00015001865	SMARCAL1	97	71.236	ENSCSEG00000010785	SMARCAL1	99	71.236	Cynoglossus_semilaevis
ENSORLG00015001865	SMARCAL1	100	71.319	ENSCVAG00000018780	SMARCAL1	100	71.319	Cyprinodon_variegatus
ENSORLG00015001865	SMARCAL1	77	46.879	ENSEBUG00000011906	SMARCAL1	99	47.222	Eptatretus_burgeri
ENSORLG00015001865	SMARCAL1	78	74.395	ENSELUG00000010440	-	95	71.049	Esox_lucius
ENSORLG00015001865	SMARCAL1	77	63.309	ENSFALG00000003981	SMARCAL1	74	61.964	Ficedula_albicollis
ENSORLG00015001865	SMARCAL1	100	72.088	ENSFHEG00000008380	SMARCAL1	100	72.088	Fundulus_heteroclitus
ENSORLG00015001865	SMARCAL1	61	73.759	ENSGMOG00000010034	smarcal1	91	73.759	Gadus_morhua
ENSORLG00015001865	SMARCAL1	82	60.377	ENSGALG00000011475	RPL37A	76	60.377	Gallus_gallus
ENSORLG00015001865	SMARCAL1	87	80.748	ENSGACG00000006073	SMARCAL1	100	83.054	Gasterosteus_aculeatus
ENSORLG00015001865	SMARCAL1	89	56.770	ENSGAGG00000015660	SMARCAL1	85	56.770	Gopherus_agassizii
ENSORLG00015001865	SMARCAL1	99	72.566	ENSHBUG00000002973	smarcal1	99	72.788	Haplochromis_burtoni
ENSORLG00015001865	SMARCAL1	95	68.531	ENSHCOG00000017921	smarcal1	98	68.531	Hippocampus_comes
ENSORLG00015001865	SMARCAL1	97	75.227	ENSKMAG00000012023	SMARCAL1	100	75.568	Kryptolebias_marmoratus
ENSORLG00015001865	SMARCAL1	92	71.394	ENSLBEG00000022915	smarcal1	99	71.394	Labrus_bergylta
ENSORLG00015001865	SMARCAL1	90	71.780	ENSLBEG00000003493	smarcal1	100	72.014	Labrus_bergylta
ENSORLG00015001865	SMARCAL1	100	49.430	ENSLACG00000010974	SMARCAL1	99	49.539	Latimeria_chalumnae
ENSORLG00015001865	SMARCAL1	92	63.400	ENSLOCG00000009637	smarcal1	99	63.400	Lepisosteus_oculatus
ENSORLG00015001865	SMARCAL1	98	75.085	ENSMAMG00000000828	SMARCAL1	99	75.085	Mastacembelus_armatus
ENSORLG00015001865	SMARCAL1	99	72.124	ENSMZEG00005007660	SMARCAL1	99	72.788	Maylandia_zebra
ENSORLG00015001865	SMARCAL1	96	54.125	ENSMGAG00000011658	SMARCAL1	96	54.125	Meleagris_gallopavo
ENSORLG00015001865	SMARCAL1	92	70.752	ENSMMOG00000003842	smarcal1	94	70.652	Mola_mola
ENSORLG00015001865	SMARCAL1	97	50.738	ENSMODG00000015544	SMARCAL1	97	50.738	Monodelphis_domestica
ENSORLG00015001865	SMARCAL1	92	73.212	ENSNBRG00000016273	smarcal1	97	73.212	Neolamprologus_brichardi
ENSORLG00015001865	SMARCAL1	92	52.159	ENSMEUG00000004395	SMARCAL1	100	52.159	Notamacropus_eugenii
ENSORLG00015001865	SMARCAL1	99	73.556	ENSONIG00000009036	smarcal1	100	82.703	Oreochromis_niloticus
ENSORLG00015001865	SMARCAL1	100	98.880	ENSORLG00000016455	SMARCAL1	100	98.880	Oryzias_latipes
ENSORLG00015001865	SMARCAL1	100	98.768	ENSORLG00020001610	SMARCAL1	100	98.768	Oryzias_latipes_hni
ENSORLG00015001865	SMARCAL1	100	90.817	ENSOMEG00000001845	smarcal1	100	90.817	Oryzias_melastigma
ENSORLG00015001865	SMARCAL1	100	68.127	ENSPMGG00000019092	SMARCAL1	100	67.714	Periophthalmus_magnuspinnatus
ENSORLG00015001865	SMARCAL1	97	50.315	ENSPCIG00000022514	SMARCAL1	99	51.163	Phascolarctos_cinereus
ENSORLG00015001865	SMARCAL1	100	72.167	ENSPFOG00000000560	SMARCAL1	100	72.167	Poecilia_formosa
ENSORLG00015001865	SMARCAL1	100	72.167	ENSPMEG00000018146	SMARCAL1	100	72.167	Poecilia_mexicana
ENSORLG00015001865	SMARCAL1	60	86.343	ENSPREG00000009591	SMARCAL1	95	86.343	Poecilia_reticulata
ENSORLG00015001865	SMARCAL1	98	66.212	ENSPNAG00000014900	smarcal1	92	66.212	Pygocentrus_nattereri
ENSORLG00015001865	SMARCAL1	97	51.381	ENSSHAG00000013538	SMARCAL1	97	51.381	Sarcophilus_harrisii
ENSORLG00015001865	SMARCAL1	100	71.154	ENSSMAG00000010427	SMARCAL1	100	71.154	Scophthalmus_maximus
ENSORLG00015001865	SMARCAL1	97	73.831	ENSSDUG00000017470	SMARCAL1	95	74.499	Seriola_dumerili
ENSORLG00015001865	SMARCAL1	100	72.541	ENSSLDG00000007224	SMARCAL1	100	73.189	Seriola_lalandi_dorsalis
ENSORLG00015001865	SMARCAL1	85	61.538	ENSSPUG00000015369	SMARCAL1	78	61.538	Sphenodon_punctatus
ENSORLG00015001865	SMARCAL1	92	75.515	ENSSPAG00000003742	smarcal1	99	76.357	Stegastes_partitus
ENSORLG00015001865	SMARCAL1	77	57.308	ENSSSCG00000035501	SMARCAL1	76	57.308	Sus_scrofa
ENSORLG00015001865	SMARCAL1	77	61.730	ENSTGUG00000005079	SMARCAL1	99	61.730	Taeniopygia_guttata
ENSORLG00015001865	SMARCAL1	98	62.770	ENSTRUG00000010701	SMARCAL1	99	62.770	Takifugu_rubripes
ENSORLG00015001865	SMARCAL1	97	45.494	ENSTTRG00000009001	SMARCAL1	96	45.386	Tursiops_truncatus
ENSORLG00015001865	SMARCAL1	96	57.066	ENSXETG00000000465	smarcal1	97	57.066	Xenopus_tropicalis