EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015002080 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: -
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 51923 bases
Position: chr3:9308508-9360430
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001332	CPSF_A	PF03178.15	7.7e-76	1	1
ENSORLP00015001360	CPSF_A	PF03178.15	8.1e-76	1	1
ENSORLP00015001407	CPSF_A	PF03178.15	8.5e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012819	-	5601	-	ENSORLP00015001332	1051 (aa)	-	-
ENSORLT00015012778	-	5601	-	ENSORLP00015001360	1051 (aa)	-	-
ENSORLT00015012723	-	5718	-	ENSORLP00015001407	1090 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002080	ddb1	99	90.884	ENSG00000167986	DDB1	100	94.521	Homo_sapiens
ENSORLG00015002080	ddb1	99	97.674	ENSAPOG00000005036	ddb1	99	97.857	Acanthochromis_polyacanthus
ENSORLG00015002080	ddb1	99	90.977	ENSAMEG00000016518	DDB1	94	90.977	Ailuropoda_melanoleuca
ENSORLG00015002080	ddb1	90	97.959	ENSACIG00000020624	ddb1	99	97.959	Amphilophus_citrinellus
ENSORLG00015002080	ddb1	99	97.395	ENSAOCG00000003066	ddb1	94	97.395	Amphiprion_ocellaris
ENSORLG00015002080	ddb1	99	97.672	ENSAPEG00000000092	ddb1	99	97.672	Amphiprion_percula
ENSORLG00015002080	ddb1	99	97.953	ENSATEG00000020571	ddb1	97	97.953	Anabas_testudineus
ENSORLG00015002080	ddb1	99	89.106	ENSAPLG00000007174	DDB1	94	89.106	Anas_platyrhynchos
ENSORLG00015002080	ddb1	99	90.326	ENSACAG00000017758	DDB1	94	90.326	Anolis_carolinensis
ENSORLG00015002080	ddb1	99	90.884	ENSANAG00000021878	DDB1	94	90.884	Aotus_nancymaae
ENSORLG00015002080	ddb1	99	97.488	ENSACLG00000012401	ddb1	99	97.092	Astatotilapia_calliptera
ENSORLG00015002080	ddb1	99	90.884	ENSBTAG00000021569	DDB1	88	90.884	Bos_taurus
ENSORLG00015002080	ddb1	98	37.024	WBGene00010890	ddb-1	94	37.024	Caenorhabditis_elegans
ENSORLG00015002080	ddb1	99	90.884	ENSCJAG00000019319	DDB1	94	90.884	Callithrix_jacchus
ENSORLG00015002080	ddb1	99	91.256	ENSCAFG00000016264	DDB1	99	91.256	Canis_familiaris
ENSORLG00015002080	ddb1	99	91.256	ENSCAFG00020012722	DDB1	99	91.256	Canis_lupus_dingo
ENSORLG00015002080	ddb1	99	90.884	ENSCHIG00000014969	DDB1	94	90.884	Capra_hircus
ENSORLG00015002080	ddb1	99	90.605	ENSTSYG00000008027	DDB1	94	90.605	Carlito_syrichta
ENSORLG00015002080	ddb1	97	90.702	ENSCAPG00000010786	DDB1	94	90.702	Cavia_aperea
ENSORLG00015002080	ddb1	99	90.698	ENSCPOG00000009956	DDB1	94	90.698	Cavia_porcellus
ENSORLG00015002080	ddb1	99	90.884	ENSCCAG00000035883	DDB1	94	90.884	Cebus_capucinus
ENSORLG00015002080	ddb1	98	88.992	ENSCATG00000044495	DDB1	94	88.992	Cercocebus_atys
ENSORLG00015002080	ddb1	99	90.884	ENSCLAG00000004126	DDB1	94	90.884	Chinchilla_lanigera
ENSORLG00015002080	ddb1	99	90.884	ENSCSAG00000006392	DDB1	94	90.884	Chlorocebus_sabaeus
ENSORLG00015002080	ddb1	88	83.673	ENSCHOG00000011377	DDB1	86	83.673	Choloepus_hoffmanni
ENSORLG00015002080	ddb1	99	90.605	ENSCPBG00000017728	DDB1	94	90.605	Chrysemys_picta_bellii
ENSORLG00015002080	ddb1	99	61.362	ENSCING00000007437	-	94	61.362	Ciona_intestinalis
ENSORLG00015002080	ddb1	92	60.838	ENSCSAVG00000004783	-	100	60.166	Ciona_savignyi
ENSORLG00015002080	ddb1	99	90.884	ENSCANG00000019948	DDB1	94	90.884	Colobus_angolensis_palliatus
ENSORLG00015002080	ddb1	99	90.977	ENSCGRG00001016599	Ddb1	98	90.112	Cricetulus_griseus_chok1gshd
ENSORLG00015002080	ddb1	99	90.977	ENSCGRG00000013427	Ddb1	94	90.977	Cricetulus_griseus_crigri
ENSORLG00015002080	ddb1	97	97.078	ENSCSEG00000012499	ddb1	99	95.344	Cynoglossus_semilaevis
ENSORLG00015002080	ddb1	99	97.486	ENSCVAG00000019531	ddb1	99	97.486	Cyprinodon_variegatus
ENSORLG00015002080	ddb1	98	92.071	ENSDARG00000074431	ddb1	94	92.071	Danio_rerio
ENSORLG00015002080	ddb1	99	91.256	ENSDNOG00000014884	DDB1	97	91.256	Dasypus_novemcinctus
ENSORLG00015002080	ddb1	85	93.636	ENSDORG00000000127	Ddb1	93	93.636	Dipodomys_ordii
ENSORLG00015002080	ddb1	75	30.719	FBgn0024698	Cpsf160	63	30.719	Drosophila_melanogaster
ENSORLG00015002080	ddb1	98	61.132	FBgn0260962	pic	94	61.132	Drosophila_melanogaster
ENSORLG00015002080	ddb1	70	93.701	ENSETEG00000001053	-	64	93.701	Echinops_telfairi
ENSORLG00015002080	ddb1	82	83.802	ENSEBUG00000014593	ddb1	97	83.802	Eptatretus_burgeri
ENSORLG00015002080	ddb1	99	90.977	ENSEASG00005008184	DDB1	94	90.977	Equus_asinus_asinus
ENSORLG00015002080	ddb1	99	91.070	ENSECAG00000012136	DDB1	94	91.070	Equus_caballus
ENSORLG00015002080	ddb1	89	87.205	ENSEEUG00000003194	DDB1	85	87.205	Erinaceus_europaeus
ENSORLG00015002080	ddb1	99	96.000	ENSELUG00000023868	ddb1	94	96.000	Esox_lucius
ENSORLG00015002080	ddb1	99	90.977	ENSFCAG00000029716	DDB1	94	90.977	Felis_catus
ENSORLG00015002080	ddb1	99	90.140	ENSFALG00000011981	DDB1	95	90.064	Ficedula_albicollis
ENSORLG00015002080	ddb1	99	90.884	ENSFDAG00000005128	DDB1	94	90.884	Fukomys_damarensis
ENSORLG00015002080	ddb1	88	97.826	ENSFHEG00000022133	ddb1	93	97.826	Fundulus_heteroclitus
ENSORLG00015002080	ddb1	86	97.659	ENSGMOG00000019386	ddb1	94	97.659	Gadus_morhua
ENSORLG00015002080	ddb1	99	90.791	ENSGALG00000042333	DDB1	94	90.791	Gallus_gallus
ENSORLG00015002080	ddb1	99	97.495	ENSGAFG00000013142	ddb1	99	97.495	Gambusia_affinis
ENSORLG00015002080	ddb1	98	97.290	ENSGACG00000017182	ddb1	98	97.290	Gasterosteus_aculeatus
ENSORLG00015002080	ddb1	93	90.285	ENSGAGG00000014124	DDB1	94	90.285	Gopherus_agassizii
ENSORLG00015002080	ddb1	99	90.884	ENSGGOG00000004052	DDB1	94	90.884	Gorilla_gorilla
ENSORLG00015002080	ddb1	99	97.488	ENSHBUG00000008873	ddb1	94	97.488	Haplochromis_burtoni
ENSORLG00015002080	ddb1	99	90.884	ENSHGLG00000018430	DDB1	94	90.884	Heterocephalus_glaber_female
ENSORLG00015002080	ddb1	99	89.860	ENSHGLG00100014475	DDB1	94	89.860	Heterocephalus_glaber_male
ENSORLG00015002080	ddb1	99	97.207	ENSHCOG00000018670	ddb1	98	97.207	Hippocampus_comes
ENSORLG00015002080	ddb1	99	95.438	ENSIPUG00000005612	DDB1	98	95.438	Ictalurus_punctatus
ENSORLG00015002080	ddb1	99	90.884	ENSSTOG00000007552	DDB1	94	90.884	Ictidomys_tridecemlineatus
ENSORLG00015002080	ddb1	99	90.884	ENSJJAG00000017769	Ddb1	94	90.884	Jaculus_jaculus
ENSORLG00015002080	ddb1	99	97.672	ENSKMAG00000002315	ddb1	99	97.672	Kryptolebias_marmoratus
ENSORLG00015002080	ddb1	88	97.711	ENSLBEG00000017065	ddb1	99	97.711	Labrus_bergylta
ENSORLG00015002080	ddb1	98	90.867	ENSLACG00000017611	DDB1	97	90.207	Latimeria_chalumnae
ENSORLG00015002080	ddb1	91	86.574	ENSLOCG00000000012	ddb1	94	86.574	Lepisosteus_oculatus
ENSORLG00015002080	ddb1	99	90.791	ENSLAFG00000011513	DDB1	94	90.791	Loxodonta_africana
ENSORLG00015002080	ddb1	99	90.884	ENSMFAG00000042035	DDB1	94	90.884	Macaca_fascicularis
ENSORLG00015002080	ddb1	99	90.884	ENSMMUG00000002691	DDB1	100	94.286	Macaca_mulatta
ENSORLG00015002080	ddb1	99	90.884	ENSMNEG00000031559	DDB1	94	90.884	Macaca_nemestrina
ENSORLG00015002080	ddb1	99	90.884	ENSMLEG00000044136	DDB1	98	89.532	Mandrillus_leucophaeus
ENSORLG00015002080	ddb1	99	97.953	ENSMAMG00000014372	ddb1	94	97.953	Mastacembelus_armatus
ENSORLG00015002080	ddb1	99	97.395	ENSMZEG00005013835	ddb1	94	97.395	Maylandia_zebra
ENSORLG00015002080	ddb1	93	89.784	ENSMGAG00000004990	DDB1	95	89.784	Meleagris_gallopavo
ENSORLG00015002080	ddb1	99	90.977	ENSMAUG00000012926	Ddb1	94	90.977	Mesocricetus_auratus
ENSORLG00015002080	ddb1	99	91.070	ENSMICG00000013703	DDB1	94	91.070	Microcebus_murinus
ENSORLG00015002080	ddb1	99	90.884	ENSMOCG00000020499	Ddb1	94	90.884	Microtus_ochrogaster
ENSORLG00015002080	ddb1	90	97.857	ENSMMOG00000001758	ddb1	99	97.857	Mola_mola
ENSORLG00015002080	ddb1	99	83.101	ENSMODG00000020353	DDB1	93	83.101	Monodelphis_domestica
ENSORLG00015002080	ddb1	99	97.581	ENSMALG00000014071	ddb1	94	97.581	Monopterus_albus
ENSORLG00015002080	ddb1	99	90.977	MGP_CAROLIEiJ_G0022695	Ddb1	94	90.977	Mus_caroli
ENSORLG00015002080	ddb1	99	91.070	ENSMUSG00000024740	Ddb1	94	91.070	Mus_musculus
ENSORLG00015002080	ddb1	99	90.977	MGP_PahariEiJ_G0014189	Ddb1	94	90.977	Mus_pahari
ENSORLG00015002080	ddb1	99	91.070	MGP_SPRETEiJ_G0023609	Ddb1	94	91.070	Mus_spretus
ENSORLG00015002080	ddb1	99	87.814	ENSMPUG00000014200	DDB1	94	87.814	Mustela_putorius_furo
ENSORLG00015002080	ddb1	99	91.070	ENSMLUG00000013232	DDB1	94	91.070	Myotis_lucifugus
ENSORLG00015002080	ddb1	99	91.070	ENSNGAG00000009384	Ddb1	94	91.070	Nannospalax_galili
ENSORLG00015002080	ddb1	99	97.581	ENSNBRG00000019581	ddb1	94	97.581	Neolamprologus_brichardi
ENSORLG00015002080	ddb1	98	88.529	ENSNLEG00000002022	DDB1	94	88.529	Nomascus_leucogenys
ENSORLG00015002080	ddb1	88	95.434	ENSMEUG00000001099	DDB1	87	95.434	Notamacropus_eugenii
ENSORLG00015002080	ddb1	92	82.091	ENSOPRG00000008254	DDB1	85	82.091	Ochotona_princeps
ENSORLG00015002080	ddb1	99	90.791	ENSODEG00000002419	DDB1	94	90.791	Octodon_degus
ENSORLG00015002080	ddb1	99	97.581	ENSONIG00000005804	ddb1	94	97.581	Oreochromis_niloticus
ENSORLG00015002080	ddb1	92	90.589	ENSOANG00000004897	DDB1	94	90.693	Ornithorhynchus_anatinus
ENSORLG00015002080	ddb1	99	90.977	ENSOCUG00000001667	DDB1	94	90.977	Oryctolagus_cuniculus
ENSORLG00015002080	ddb1	99	99.815	ENSORLG00000001399	ddb1	98	99.808	Oryzias_latipes
ENSORLG00015002080	ddb1	99	99.723	ENSORLG00020001277	ddb1	96	99.723	Oryzias_latipes_hni
ENSORLG00015002080	ddb1	99	99.257	ENSOMEG00000006181	ddb1	97	99.257	Oryzias_melastigma
ENSORLG00015002080	ddb1	99	91.070	ENSOGAG00000016103	DDB1	94	91.070	Otolemur_garnettii
ENSORLG00015002080	ddb1	99	90.884	ENSOARG00000011716	DDB1	93	90.884	Ovis_aries
ENSORLG00015002080	ddb1	99	90.884	ENSPPAG00000035343	DDB1	94	90.884	Pan_paniscus
ENSORLG00015002080	ddb1	99	90.977	ENSPPRG00000013300	DDB1	94	90.977	Panthera_pardus
ENSORLG00015002080	ddb1	97	90.987	ENSPTIG00000006909	DDB1	92	90.987	Panthera_tigris_altaica
ENSORLG00015002080	ddb1	99	90.884	ENSPTRG00000003737	DDB1	94	90.884	Pan_troglodytes
ENSORLG00015002080	ddb1	99	90.884	ENSPANG00000000242	DDB1	94	90.884	Papio_anubis
ENSORLG00015002080	ddb1	99	95.810	ENSPKIG00000019213	ddb1	94	95.810	Paramormyrops_kingsleyae
ENSORLG00015002080	ddb1	97	89.896	ENSPSIG00000013275	DDB1	94	89.896	Pelodiscus_sinensis
ENSORLG00015002080	ddb1	90	97.857	ENSPMGG00000021179	ddb1	99	97.857	Periophthalmus_magnuspinnatus
ENSORLG00015002080	ddb1	99	90.977	ENSPEMG00000012241	Ddb1	94	90.977	Peromyscus_maniculatus_bairdii
ENSORLG00015002080	ddb1	93	86.444	ENSPMAG00000008479	ddb1	100	86.444	Petromyzon_marinus
ENSORLG00015002080	ddb1	99	91.349	ENSPCIG00000002643	DDB1	94	91.349	Phascolarctos_cinereus
ENSORLG00015002080	ddb1	98	97.946	ENSPFOG00000002768	ddb1	94	97.946	Poecilia_formosa
ENSORLG00015002080	ddb1	99	97.864	ENSPLAG00000017227	ddb1	98	97.864	Poecilia_latipinna
ENSORLG00015002080	ddb1	99	97.864	ENSPMEG00000011398	ddb1	98	97.864	Poecilia_mexicana
ENSORLG00015002080	ddb1	99	97.953	ENSPREG00000004440	ddb1	98	97.953	Poecilia_reticulata
ENSORLG00015002080	ddb1	99	86.642	ENSPPYG00000003193	DDB1	94	86.642	Pongo_abelii
ENSORLG00015002080	ddb1	86	89.256	ENSPCAG00000011040	DDB1	79	89.256	Procavia_capensis
ENSORLG00015002080	ddb1	99	90.547	ENSPCOG00000015176	DDB1	94	90.547	Propithecus_coquereli
ENSORLG00015002080	ddb1	99	90.791	ENSPVAG00000003847	DDB1	94	90.791	Pteropus_vampyrus
ENSORLG00015002080	ddb1	99	96.089	ENSPNAG00000006635	ddb1	97	96.089	Pygocentrus_nattereri
ENSORLG00015002080	ddb1	99	91.070	ENSRNOG00000020715	Ddb1	94	91.070	Rattus_norvegicus
ENSORLG00015002080	ddb1	99	90.884	ENSRBIG00000033611	DDB1	95	90.884	Rhinopithecus_bieti
ENSORLG00015002080	ddb1	99	90.884	ENSRROG00000041407	DDB1	94	90.884	Rhinopithecus_roxellana
ENSORLG00015002080	ddb1	99	90.977	ENSSBOG00000019775	DDB1	94	90.977	Saimiri_boliviensis_boliviensis
ENSORLG00015002080	ddb1	92	88.955	ENSSHAG00000011600	DDB1	94	88.955	Sarcophilus_harrisii
ENSORLG00015002080	ddb1	99	95.814	ENSSFOG00015011151	ddb1	97	95.814	Scleropages_formosus
ENSORLG00015002080	ddb1	99	97.302	ENSSMAG00000009495	ddb1	94	97.302	Scophthalmus_maximus
ENSORLG00015002080	ddb1	99	97.860	ENSSDUG00000004642	ddb1	94	97.860	Seriola_dumerili
ENSORLG00015002080	ddb1	99	97.860	ENSSLDG00000015804	ddb1	94	97.860	Seriola_lalandi_dorsalis
ENSORLG00015002080	ddb1	74	94.340	ENSSARG00000003290	-	71	94.340	Sorex_araneus
ENSORLG00015002080	ddb1	99	90.326	ENSSPUG00000019338	DDB1	94	90.326	Sphenodon_punctatus
ENSORLG00015002080	ddb1	99	97.953	ENSSPAG00000009888	ddb1	99	97.953	Stegastes_partitus
ENSORLG00015002080	ddb1	98	90.645	ENSSSCG00000013094	DDB1	94	90.645	Sus_scrofa
ENSORLG00015002080	ddb1	98	90.901	ENSTGUG00000006414	DDB1	94	90.901	Taeniopygia_guttata
ENSORLG00015002080	ddb1	99	96.927	ENSTRUG00000016682	ddb1	99	96.927	Takifugu_rubripes
ENSORLG00015002080	ddb1	89	91.142	ENSTNIG00000009565	ddb1	93	91.142	Tetraodon_nigroviridis
ENSORLG00015002080	ddb1	95	84.605	ENSTTRG00000011055	DDB1	89	84.605	Tursiops_truncatus
ENSORLG00015002080	ddb1	99	91.256	ENSUAMG00000017793	DDB1	93	91.256	Ursus_americanus
ENSORLG00015002080	ddb1	99	91.256	ENSUMAG00000011788	DDB1	98	91.256	Ursus_maritimus
ENSORLG00015002080	ddb1	88	86.132	ENSVPAG00000007963	DDB1	86	86.132	Vicugna_pacos
ENSORLG00015002080	ddb1	99	90.977	ENSVVUG00000004987	DDB1	94	90.977	Vulpes_vulpes
ENSORLG00015002080	ddb1	99	88.508	ENSXETG00000008820	ddb1	94	88.508	Xenopus_tropicalis
ENSORLG00015002080	ddb1	90	97.755	ENSXCOG00000013956	ddb1	99	97.755	Xiphophorus_couchianus
ENSORLG00015002080	ddb1	99	97.495	ENSXMAG00000000022	ddb1	99	97.495	Xiphophorus_maculatus