EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015002131 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline/glutamine-rich
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 9893 bases
Position: chr11:12592549-12602441
Accession: ZDB-GENE-040426-2452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001519	RRM_1	PF00076.22	4.3e-29	1	2
ENSORLP00015001519	RRM_1	PF00076.22	4.3e-29	2	2
ENSORLP00015001526	RRM_1	PF00076.22	4.6e-29	1	2
ENSORLP00015001526	RRM_1	PF00076.22	4.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012510	-	4232	-	ENSORLP00015001519	696 (aa)	-	-
ENSORLT00015012502	-	2487	-	ENSORLP00015001526	723 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015002131	sfpq	51	61.111	ENSORLG00015017480	pspc1	84	52.915
ENSORLG00015002131	sfpq	50	61.648	ENSORLG00015018033	nono	88	59.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002131	sfpq	58	71.494	ENSG00000116560	SFPQ	100	67.411	Homo_sapiens
ENSORLG00015002131	sfpq	90	80.793	ENSAPOG00000024257	sfpq	100	67.520	Acanthochromis_polyacanthus
ENSORLG00015002131	sfpq	57	72.158	ENSAMEG00000000815	SFPQ	100	70.183	Ailuropoda_melanoleuca
ENSORLG00015002131	sfpq	100	65.887	ENSACIG00000000905	sfpq	100	78.465	Amphilophus_citrinellus
ENSORLG00015002131	sfpq	68	79.555	ENSAOCG00000002889	sfpq	100	68.059	Amphiprion_ocellaris
ENSORLG00015002131	sfpq	68	79.555	ENSAPEG00000016556	sfpq	100	68.059	Amphiprion_percula
ENSORLG00015002131	sfpq	100	77.148	ENSATEG00000002981	sfpq	100	65.522	Anabas_testudineus
ENSORLG00015002131	sfpq	54	64.128	ENSANAG00000027438	-	61	62.857	Aotus_nancymaae
ENSORLG00015002131	sfpq	100	68.163	ENSACLG00000022332	sfpq	100	69.273	Astatotilapia_calliptera
ENSORLG00015002131	sfpq	64	74.249	ENSAMXG00000011538	sfpq	99	56.208	Astyanax_mexicanus
ENSORLG00015002131	sfpq	58	71.494	ENSBTAG00000016328	SFPQ	72	65.226	Bos_taurus
ENSORLG00015002131	sfpq	58	71.494	ENSCJAG00000001431	SFPQ	86	57.437	Callithrix_jacchus
ENSORLG00015002131	sfpq	58	71.494	ENSCAFG00000003595	-	77	65.370	Canis_familiaris
ENSORLG00015002131	sfpq	57	68.822	ENSCAFG00000018271	-	92	54.890	Canis_familiaris
ENSORLG00015002131	sfpq	58	66.590	ENSCAFG00000017608	-	89	54.213	Canis_familiaris
ENSORLG00015002131	sfpq	57	68.822	ENSCAFG00020004881	-	92	55.047	Canis_lupus_dingo
ENSORLG00015002131	sfpq	58	71.494	ENSCHIG00000023097	SFPQ	71	65.226	Capra_hircus
ENSORLG00015002131	sfpq	58	71.494	ENSCCAG00000029361	-	88	57.121	Cebus_capucinus
ENSORLG00015002131	sfpq	51	74.722	ENSCATG00000036179	-	82	55.882	Cercocebus_atys
ENSORLG00015002131	sfpq	58	48.643	ENSCATG00000032664	-	87	40.465	Cercocebus_atys
ENSORLG00015002131	sfpq	58	71.494	ENSCSAG00000001082	SFPQ	87	57.009	Chlorocebus_sabaeus
ENSORLG00015002131	sfpq	50	70.079	ENSCHOG00000009131	SFPQ	100	70.079	Choloepus_hoffmanni
ENSORLG00015002131	sfpq	58	71.233	ENSCPBG00000018674	SFPQ	68	71.233	Chrysemys_picta_bellii
ENSORLG00015002131	sfpq	58	71.034	ENSCGRG00001011698	Sfpq	84	56.964	Cricetulus_griseus_chok1gshd
ENSORLG00015002131	sfpq	57	71.628	ENSCGRG00000010128	Sfpq	95	71.528	Cricetulus_griseus_crigri
ENSORLG00015002131	sfpq	100	62.432	ENSCSEG00000007852	sfpq	100	61.918	Cynoglossus_semilaevis
ENSORLG00015002131	sfpq	100	67.368	ENSCVAG00000019538	sfpq	100	66.623	Cyprinodon_variegatus
ENSORLG00015002131	sfpq	57	77.804	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSORLG00015002131	sfpq	58	71.494	ENSDNOG00000049454	SFPQ	86	57.632	Dasypus_novemcinctus
ENSORLG00015002131	sfpq	58	71.494	ENSDORG00000008109	Sfpq	87	57.795	Dipodomys_ordii
ENSORLG00015002131	sfpq	57	65.661	ENSETEG00000001095	SFPQ	61	61.404	Echinops_telfairi
ENSORLG00015002131	sfpq	58	71.494	ENSEASG00005012012	SFPQ	87	56.902	Equus_asinus_asinus
ENSORLG00015002131	sfpq	58	71.494	ENSECAG00000000642	SFPQ	87	56.902	Equus_caballus
ENSORLG00015002131	sfpq	58	71.494	ENSFCAG00000042862	SFPQ	87	57.188	Felis_catus
ENSORLG00015002131	sfpq	100	67.104	ENSFHEG00000015200	sfpq	100	68.393	Fundulus_heteroclitus
ENSORLG00015002131	sfpq	81	74.630	ENSGMOG00000011957	sfpq	98	74.841	Gadus_morhua
ENSORLG00015002131	sfpq	77	81.340	ENSGMOG00000011950	SFPQ	99	75.316	Gadus_morhua
ENSORLG00015002131	sfpq	58	71.005	ENSGALG00000002514	SFPQ	91	56.966	Gallus_gallus
ENSORLG00015002131	sfpq	100	68.371	ENSGAFG00000014571	sfpq	100	63.995	Gambusia_affinis
ENSORLG00015002131	sfpq	100	64.973	ENSGACG00000002034	sfpq	100	65.984	Gasterosteus_aculeatus
ENSORLG00015002131	sfpq	58	70.548	ENSHGLG00000012001	SFPQ	63	70.548	Heterocephalus_glaber_female
ENSORLG00015002131	sfpq	100	61.806	ENSHCOG00000008612	sfpq	92	82.659	Hippocampus_comes
ENSORLG00015002131	sfpq	61	70.065	ENSIPUG00000013076	SFPQ	83	69.654	Ictalurus_punctatus
ENSORLG00015002131	sfpq	58	71.494	ENSJJAG00000015633	Sfpq	86	57.410	Jaculus_jaculus
ENSORLG00015002131	sfpq	100	65.621	ENSKMAG00000000238	sfpq	100	70.128	Kryptolebias_marmoratus
ENSORLG00015002131	sfpq	100	64.324	ENSLBEG00000003163	sfpq	98	66.712	Labrus_bergylta
ENSORLG00015002131	sfpq	57	67.674	ENSLACG00000014728	SFPQ	70	70.465	Latimeria_chalumnae
ENSORLG00015002131	sfpq	95	52.610	ENSLOCG00000001067	sfpq	72	75.306	Lepisosteus_oculatus
ENSORLG00015002131	sfpq	58	71.264	ENSLAFG00000015951	SFPQ	95	57.711	Loxodonta_africana
ENSORLG00015002131	sfpq	58	71.494	ENSMFAG00000000797	SFPQ	88	57.009	Macaca_fascicularis
ENSORLG00015002131	sfpq	58	71.494	ENSMMUG00000019154	SFPQ	88	57.953	Macaca_mulatta
ENSORLG00015002131	sfpq	58	71.494	ENSMNEG00000038895	SFPQ	88	57.121	Macaca_nemestrina
ENSORLG00015002131	sfpq	99	75.277	ENSMAMG00000007875	sfpq	100	66.804	Mastacembelus_armatus
ENSORLG00015002131	sfpq	100	70.742	ENSMZEG00005026091	sfpq	100	68.450	Maylandia_zebra
ENSORLG00015002131	sfpq	50	68.702	ENSMGAG00000004237	SFPQ	100	68.112	Meleagris_gallopavo
ENSORLG00015002131	sfpq	58	71.034	ENSMAUG00000006402	Sfpq	87	57.188	Mesocricetus_auratus
ENSORLG00015002131	sfpq	58	71.494	ENSMICG00000027265	SFPQ	88	57.277	Microcebus_murinus
ENSORLG00015002131	sfpq	58	68.506	ENSMOCG00000019075	Sfpq	98	65.063	Microtus_ochrogaster
ENSORLG00015002131	sfpq	100	65.616	ENSMMOG00000001074	sfpq	100	64.569	Mola_mola
ENSORLG00015002131	sfpq	58	71.889	ENSMODG00000017937	SFPQ	76	65.891	Monodelphis_domestica
ENSORLG00015002131	sfpq	100	65.289	ENSMALG00000010381	sfpq	100	65.110	Monopterus_albus
ENSORLG00015002131	sfpq	58	71.034	ENSMUSG00000028820	Sfpq	72	64.775	Mus_musculus
ENSORLG00015002131	sfpq	58	71.034	MGP_PahariEiJ_G0028818	Sfpq	82	56.916	Mus_pahari
ENSORLG00015002131	sfpq	58	71.034	MGP_SPRETEiJ_G0027466	Sfpq	72	64.775	Mus_spretus
ENSORLG00015002131	sfpq	58	71.101	ENSMLUG00000027090	SFPQ	97	71.594	Myotis_lucifugus
ENSORLG00015002131	sfpq	58	71.264	ENSNGAG00000000888	Sfpq	87	57.547	Nannospalax_galili
ENSORLG00015002131	sfpq	100	68.011	ENSNBRG00000017479	sfpq	100	68.861	Neolamprologus_brichardi
ENSORLG00015002131	sfpq	58	71.824	ENSMEUG00000014082	SFPQ	62	71.824	Notamacropus_eugenii
ENSORLG00015002131	sfpq	58	71.494	ENSOPRG00000013696	SFPQ	62	71.494	Ochotona_princeps
ENSORLG00015002131	sfpq	56	62.322	ENSODEG00000005485	SFPQ	91	57.143	Octodon_degus
ENSORLG00015002131	sfpq	100	70.330	ENSONIG00000017737	sfpq	99	68.904	Oreochromis_niloticus
ENSORLG00015002131	sfpq	68	64.315	ENSOCUG00000001877	SFPQ	99	64.637	Oryctolagus_cuniculus
ENSORLG00015002131	sfpq	100	97.787	ENSORLG00000007459	sfpq	100	97.787	Oryzias_latipes
ENSORLG00015002131	sfpq	100	98.619	ENSORLG00020011818	sfpq	100	98.619	Oryzias_latipes_hni
ENSORLG00015002131	sfpq	100	88.363	ENSOMEG00000018020	sfpq	100	86.604	Oryzias_melastigma
ENSORLG00015002131	sfpq	58	71.494	ENSOGAG00000027710	SFPQ	94	65.805	Otolemur_garnettii
ENSORLG00015002131	sfpq	57	71.824	ENSOARG00000019439	SFPQ	66	71.824	Ovis_aries
ENSORLG00015002131	sfpq	58	71.494	ENSPPAG00000030078	SFPQ	61	71.494	Pan_paniscus
ENSORLG00015002131	sfpq	58	65.747	ENSPTRG00000000518	SFPQ	87	53.115	Pan_troglodytes
ENSORLG00015002131	sfpq	58	71.494	ENSPANG00000005380	SFPQ	75	65.029	Papio_anubis
ENSORLG00015002131	sfpq	77	63.979	ENSPKIG00000023035	sfpq	73	78.251	Paramormyrops_kingsleyae
ENSORLG00015002131	sfpq	57	72.390	ENSPSIG00000011494	SFPQ	99	72.158	Pelodiscus_sinensis
ENSORLG00015002131	sfpq	88	76.098	ENSPMGG00000023883	sfpq	100	75.556	Periophthalmus_magnuspinnatus
ENSORLG00015002131	sfpq	57	71.694	ENSPEMG00000009794	Sfpq	96	67.735	Peromyscus_maniculatus_bairdii
ENSORLG00015002131	sfpq	58	71.889	ENSPCIG00000000923	SFPQ	73	65.625	Phascolarctos_cinereus
ENSORLG00015002131	sfpq	100	70.458	ENSPFOG00000003127	sfpq	100	65.851	Poecilia_formosa
ENSORLG00015002131	sfpq	100	68.826	ENSPREG00000008060	sfpq	100	67.067	Poecilia_reticulata
ENSORLG00015002131	sfpq	58	71.494	ENSPPYG00000001560	SFPQ	88	57.121	Pongo_abelii
ENSORLG00015002131	sfpq	57	71.628	ENSPCAG00000006164	SFPQ	60	71.628	Procavia_capensis
ENSORLG00015002131	sfpq	58	71.494	ENSPCOG00000027127	SFPQ	88	57.188	Propithecus_coquereli
ENSORLG00015002131	sfpq	58	69.746	ENSPVAG00000001865	SFPQ	87	56.535	Pteropus_vampyrus
ENSORLG00015002131	sfpq	61	83.070	ENSPNYG00000007494	sfpq	100	69.064	Pundamilia_nyererei
ENSORLG00015002131	sfpq	76	66.667	ENSPNAG00000002128	sfpq	92	64.237	Pygocentrus_nattereri
ENSORLG00015002131	sfpq	58	71.034	ENSRNOG00000058461	Sfpq	91	56.012	Rattus_norvegicus
ENSORLG00015002131	sfpq	58	65.227	ENSRBIG00000035286	SFPQ	100	69.886	Rhinopithecus_bieti
ENSORLG00015002131	sfpq	54	74.419	ENSSHAG00000016107	-	97	69.265	Sarcophilus_harrisii
ENSORLG00015002131	sfpq	64	73.629	ENSSFOG00015009289	sfpq	86	73.840	Scleropages_formosus
ENSORLG00015002131	sfpq	95	78.497	ENSSMAG00000018201	sfpq	100	65.655	Scophthalmus_maximus
ENSORLG00015002131	sfpq	99	78.125	ENSSDUG00000008402	sfpq	100	66.621	Seriola_dumerili
ENSORLG00015002131	sfpq	99	78.125	ENSSLDG00000018917	sfpq	100	66.576	Seriola_lalandi_dorsalis
ENSORLG00015002131	sfpq	100	68.956	ENSSPAG00000016550	sfpq	100	69.959	Stegastes_partitus
ENSORLG00015002131	sfpq	58	71.494	ENSSSCG00000035690	SFPQ	87	57.590	Sus_scrofa
ENSORLG00015002131	sfpq	57	71.926	ENSTGUG00000001722	SFPQ	99	71.926	Taeniopygia_guttata
ENSORLG00015002131	sfpq	100	68.828	ENSTRUG00000003783	sfpq	100	67.862	Takifugu_rubripes
ENSORLG00015002131	sfpq	88	66.252	ENSTNIG00000011331	sfpq	99	66.417	Tetraodon_nigroviridis
ENSORLG00015002131	sfpq	58	68.894	ENSTTRG00000013930	SFPQ	62	68.894	Tursiops_truncatus
ENSORLG00015002131	sfpq	76	58.627	ENSXETG00000009682	sfpq	98	76.901	Xenopus_tropicalis
ENSORLG00015002131	sfpq	99	68.820	ENSXMAG00000016391	sfpq	99	68.421	Xiphophorus_maculatus