EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015002268 (Gene tree)
Gene ID: -
Gene Symbol: htatsf1
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4226 bases
Position: chr14:8459380-8463605
Accession: ZDB-GENE-040426-1578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001637	RRM_1	PF00076.22	6.7e-17	1	2
ENSORLP00015001637	RRM_1	PF00076.22	6.7e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012299	-	2542	-	ENSORLP00015001637	452 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002268	htatsf1	84	62.595	ENSG00000102241	HTATSF1	97	54.733	Homo_sapiens
ENSORLG00015002268	htatsf1	100	76.974	ENSAPOG00000009823	htatsf1	100	76.535	Acanthochromis_polyacanthus
ENSORLG00015002268	htatsf1	100	77.313	ENSACIG00000020459	htatsf1	100	78.855	Amphilophus_citrinellus
ENSORLG00015002268	htatsf1	100	75.810	ENSAOCG00000020994	htatsf1	100	76.026	Amphiprion_ocellaris
ENSORLG00015002268	htatsf1	100	77.174	ENSAPEG00000016432	htatsf1	100	76.739	Amphiprion_percula
ENSORLG00015002268	htatsf1	91	78.554	ENSATEG00000008903	htatsf1	93	78.795	Anabas_testudineus
ENSORLG00015002268	htatsf1	92	61.848	ENSAPLG00000012401	HTATSF1	99	62.559	Anas_platyrhynchos
ENSORLG00015002268	htatsf1	77	65.517	ENSACAG00000009346	HTATSF1	99	60.100	Anolis_carolinensis
ENSORLG00015002268	htatsf1	100	75.439	ENSACLG00000008096	htatsf1	100	76.535	Astatotilapia_calliptera
ENSORLG00015002268	htatsf1	99	67.749	ENSAMXG00000008387	htatsf1	99	67.532	Astyanax_mexicanus
ENSORLG00015002268	htatsf1	84	61.440	ENSBTAG00000032711	HTATSF1	50	61.440	Bos_taurus
ENSORLG00015002268	htatsf1	76	39.601	WBGene00022025	Y65B4A.1	75	38.746	Caenorhabditis_elegans
ENSORLG00015002268	htatsf1	84	62.660	ENSCCAG00000025329	-	55	62.660	Cebus_capucinus
ENSORLG00015002268	htatsf1	84	63.427	ENSCCAG00000022701	-	50	63.427	Cebus_capucinus
ENSORLG00015002268	htatsf1	98	62.555	ENSCPBG00000026092	HTATSF1	98	62.555	Chrysemys_picta_bellii
ENSORLG00015002268	htatsf1	84	44.094	ENSCING00000005914	-	88	45.531	Ciona_intestinalis
ENSORLG00015002268	htatsf1	87	44.536	ENSCSAVG00000000371	-	75	43.169	Ciona_savignyi
ENSORLG00015002268	htatsf1	100	77.434	ENSCVAG00000014070	htatsf1	99	78.097	Cyprinodon_variegatus
ENSORLG00015002268	htatsf1	100	65.570	ENSDARG00000056649	htatsf1	100	65.011	Danio_rerio
ENSORLG00015002268	htatsf1	78	46.893	FBgn0037081	barc	66	46.524	Drosophila_melanogaster
ENSORLG00015002268	htatsf1	98	48.786	ENSEBUG00000001534	htatsf1	83	51.942	Eptatretus_burgeri
ENSORLG00015002268	htatsf1	93	60.930	ENSEASG00005003440	HTATSF1	52	61.939	Equus_asinus_asinus
ENSORLG00015002268	htatsf1	93	60.930	ENSECAG00000009156	HTATSF1	52	61.939	Equus_caballus
ENSORLG00015002268	htatsf1	99	61.373	ENSELUG00000005486	htatsf1	90	61.635	Esox_lucius
ENSORLG00015002268	htatsf1	99	59.565	ENSFALG00000003728	HTATSF1	99	59.825	Ficedula_albicollis
ENSORLG00015002268	htatsf1	100	77.753	ENSFHEG00000020286	htatsf1	100	77.533	Fundulus_heteroclitus
ENSORLG00015002268	htatsf1	81	72.131	ENSGMOG00000016444	htatsf1	100	72.131	Gadus_morhua
ENSORLG00015002268	htatsf1	99	62.151	ENSGALG00000006410	HTATSF1	99	61.874	Gallus_gallus
ENSORLG00015002268	htatsf1	100	76.549	ENSGAFG00000003041	htatsf1	98	76.549	Gambusia_affinis
ENSORLG00015002268	htatsf1	100	76.211	ENSGACG00000020459	htatsf1	100	75.551	Gasterosteus_aculeatus
ENSORLG00015002268	htatsf1	100	75.219	ENSHBUG00000004392	htatsf1	100	76.316	Haplochromis_burtoni
ENSORLG00015002268	htatsf1	99	66.667	ENSHCOG00000009056	htatsf1	99	66.814	Hippocampus_comes
ENSORLG00015002268	htatsf1	99	61.795	ENSIPUG00000017828	htatsf1	99	62.288	Ictalurus_punctatus
ENSORLG00015002268	htatsf1	94	59.584	ENSSTOG00000012505	HTATSF1	50	64.267	Ictidomys_tridecemlineatus
ENSORLG00015002268	htatsf1	100	81.057	ENSKMAG00000007622	htatsf1	100	80.617	Kryptolebias_marmoratus
ENSORLG00015002268	htatsf1	100	73.536	ENSLBEG00000001154	htatsf1	100	73.536	Labrus_bergylta
ENSORLG00015002268	htatsf1	99	60.132	ENSLACG00000015989	HTATSF1	99	60.132	Latimeria_chalumnae
ENSORLG00015002268	htatsf1	99	45.745	ENSLOCG00000015118	htatsf1	99	44.842	Lepisosteus_oculatus
ENSORLG00015002268	htatsf1	84	63.797	ENSLAFG00000014307	HTATSF1	55	61.266	Loxodonta_africana
ENSORLG00015002268	htatsf1	84	63.077	ENSMNEG00000024084	HTATSF1	54	63.077	Macaca_nemestrina
ENSORLG00015002268	htatsf1	99	74.501	ENSMAMG00000021225	htatsf1	99	74.945	Mastacembelus_armatus
ENSORLG00015002268	htatsf1	100	75.658	ENSMZEG00005000485	htatsf1	100	76.754	Maylandia_zebra
ENSORLG00015002268	htatsf1	93	63.109	ENSMGAG00000003558	HTATSF1	97	63.573	Meleagris_gallopavo
ENSORLG00015002268	htatsf1	84	63.753	ENSMICG00000009348	HTATSF1	50	64.010	Microcebus_murinus
ENSORLG00015002268	htatsf1	100	75.497	ENSMMOG00000011013	htatsf1	100	74.614	Mola_mola
ENSORLG00015002268	htatsf1	99	60.706	ENSMODG00000014087	-	97	60.706	Monodelphis_domestica
ENSORLG00015002268	htatsf1	56	58.555	ENSMODG00000000199	-	91	56.612	Monodelphis_domestica
ENSORLG00015002268	htatsf1	100	75.551	ENSMALG00000019977	htatsf1	100	75.330	Monopterus_albus
ENSORLG00015002268	htatsf1	90	62.019	MGP_CAROLIEiJ_G0033094	Htatsf1	52	62.044	Mus_caroli
ENSORLG00015002268	htatsf1	90	61.687	ENSMUSG00000067873	Htatsf1	52	62.044	Mus_musculus
ENSORLG00015002268	htatsf1	90	61.687	MGP_SPRETEiJ_G0034249	Htatsf1	52	62.044	Mus_spretus
ENSORLG00015002268	htatsf1	95	55.936	ENSMLUG00000009234	-	51	60.668	Myotis_lucifugus
ENSORLG00015002268	htatsf1	90	61.871	ENSNGAG00000017831	Htatsf1	53	62.228	Nannospalax_galili
ENSORLG00015002268	htatsf1	100	76.096	ENSNBRG00000003818	htatsf1	100	77.193	Neolamprologus_brichardi
ENSORLG00015002268	htatsf1	89	62.592	ENSMEUG00000004133	-	94	62.347	Notamacropus_eugenii
ENSORLG00015002268	htatsf1	100	75.439	ENSONIG00000008638	htatsf1	100	76.316	Oreochromis_niloticus
ENSORLG00015002268	htatsf1	91	60.621	ENSOANG00000011674	-	99	60.621	Ornithorhynchus_anatinus
ENSORLG00015002268	htatsf1	100	98.242	ENSORLG00000002356	htatsf1	100	98.242	Oryzias_latipes
ENSORLG00015002268	htatsf1	100	98.026	ENSORLG00020017818	htatsf1	97	98.026	Oryzias_latipes_hni
ENSORLG00015002268	htatsf1	100	89.451	ENSOMEG00000007564	htatsf1	100	89.451	Oryzias_melastigma
ENSORLG00015002268	htatsf1	99	64.924	ENSPKIG00000024852	htatsf1	99	64.924	Paramormyrops_kingsleyae
ENSORLG00015002268	htatsf1	73	68.750	ENSPSIG00000010192	HTATSF1	94	68.750	Pelodiscus_sinensis
ENSORLG00015002268	htatsf1	99	70.549	ENSPMGG00000006172	htatsf1	99	70.110	Periophthalmus_magnuspinnatus
ENSORLG00015002268	htatsf1	99	57.298	ENSPCIG00000018896	-	99	57.298	Phascolarctos_cinereus
ENSORLG00015002268	htatsf1	89	61.893	ENSPCIG00000030173	-	91	61.893	Phascolarctos_cinereus
ENSORLG00015002268	htatsf1	100	77.212	ENSPFOG00000007871	htatsf1	97	77.212	Poecilia_formosa
ENSORLG00015002268	htatsf1	100	77.212	ENSPLAG00000007532	htatsf1	100	76.991	Poecilia_latipinna
ENSORLG00015002268	htatsf1	100	77.434	ENSPMEG00000000352	htatsf1	100	77.434	Poecilia_mexicana
ENSORLG00015002268	htatsf1	100	77.655	ENSPREG00000007811	htatsf1	100	77.655	Poecilia_reticulata
ENSORLG00015002268	htatsf1	85	57.326	ENSPCAG00000010576	HTATSF1	52	57.474	Procavia_capensis
ENSORLG00015002268	htatsf1	85	63.077	ENSPVAG00000010281	HTATSF1	54	63.077	Pteropus_vampyrus
ENSORLG00015002268	htatsf1	100	75.877	ENSPNYG00000016693	htatsf1	100	76.974	Pundamilia_nyererei
ENSORLG00015002268	htatsf1	99	65.328	ENSPNAG00000006166	htatsf1	99	65.393	Pygocentrus_nattereri
ENSORLG00015002268	htatsf1	84	63.359	ENSSBOG00000027186	-	50	63.359	Saimiri_boliviensis_boliviensis
ENSORLG00015002268	htatsf1	83	67.196	ENSSHAG00000006440	-	94	67.196	Sarcophilus_harrisii
ENSORLG00015002268	htatsf1	99	59.436	ENSSHAG00000018908	-	98	59.219	Sarcophilus_harrisii
ENSORLG00015002268	htatsf1	99	62.368	ENSSFOG00015012002	htatsf1	99	62.368	Scleropages_formosus
ENSORLG00015002268	htatsf1	100	72.885	ENSSMAG00000002970	htatsf1	100	72.668	Scophthalmus_maximus
ENSORLG00015002268	htatsf1	100	74.115	ENSSDUG00000020002	htatsf1	99	74.115	Seriola_dumerili
ENSORLG00015002268	htatsf1	100	77.533	ENSSLDG00000016880	htatsf1	100	77.533	Seriola_lalandi_dorsalis
ENSORLG00015002268	htatsf1	87	59.852	ENSSARG00000005193	HTATSF1	54	59.852	Sorex_araneus
ENSORLG00015002268	htatsf1	99	59.692	ENSSPUG00000014767	HTATSF1	98	59.211	Sphenodon_punctatus
ENSORLG00015002268	htatsf1	100	77.609	ENSSPAG00000000732	htatsf1	100	77.609	Stegastes_partitus
ENSORLG00015002268	htatsf1	84	64.524	ENSSSCG00000023062	HTATSF1	54	64.524	Sus_scrofa
ENSORLG00015002268	htatsf1	99	60.606	ENSTGUG00000002099	HTATSF1	99	60.606	Taeniopygia_guttata
ENSORLG00015002268	htatsf1	100	72.345	ENSTRUG00000013383	htatsf1	100	71.903	Takifugu_rubripes
ENSORLG00015002268	htatsf1	100	72.627	ENSTNIG00000016140	htatsf1	99	72.429	Tetraodon_nigroviridis
ENSORLG00015002268	htatsf1	77	62.185	ENSTTRG00000002269	HTATSF1	58	62.185	Tursiops_truncatus
ENSORLG00015002268	htatsf1	99	58.388	ENSXETG00000019749	htatsf1	85	58.388	Xenopus_tropicalis
ENSORLG00015002268	htatsf1	100	72.269	ENSXCOG00000006912	htatsf1	96	77.176	Xiphophorus_couchianus
ENSORLG00015002268	htatsf1	100	77.434	ENSXMAG00000000490	htatsf1	100	77.434	Xiphophorus_maculatus