EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015002270 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 9329 bases
Position: chr4:6219915-6229243
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015022740	TRM13	PF05206.14	1.9e-83	1	1
ENSORLP00015022740	zf-U11-48K	PF05253.12	6.1e-10	1	1
ENSORLP00015022740	zf-TRM13_CCCH	PF11722.8	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012297	-	1380	-	ENSORLP00015022740	459 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002270	trmt13	99	52.654	ENSG00000122435	TRMT13	96	54.286	Homo_sapiens
ENSORLG00015002270	trmt13	99	67.418	ENSAPOG00000015131	trmt13	99	67.828	Acanthochromis_polyacanthus
ENSORLG00015002270	trmt13	99	53.291	ENSAMEG00000008917	TRMT13	96	53.291	Ailuropoda_melanoleuca
ENSORLG00015002270	trmt13	99	71.522	ENSACIG00000005804	trmt13	96	69.717	Amphilophus_citrinellus
ENSORLG00015002270	trmt13	99	67.485	ENSAOCG00000023585	trmt13	99	67.485	Amphiprion_ocellaris
ENSORLG00015002270	trmt13	99	67.485	ENSAPEG00000004025	trmt13	99	67.485	Amphiprion_percula
ENSORLG00015002270	trmt13	100	69.313	ENSATEG00000006597	trmt13	98	69.313	Anabas_testudineus
ENSORLG00015002270	trmt13	90	52.706	ENSAPLG00000014924	TRMT13	99	52.706	Anas_platyrhynchos
ENSORLG00015002270	trmt13	98	53.548	ENSACAG00000003498	TRMT13	98	53.763	Anolis_carolinensis
ENSORLG00015002270	trmt13	99	52.442	ENSANAG00000019525	TRMT13	96	52.442	Aotus_nancymaae
ENSORLG00015002270	trmt13	99	70.897	ENSACLG00000020018	trmt13	99	70.897	Astatotilapia_calliptera
ENSORLG00015002270	trmt13	98	54.043	ENSAMXG00000017963	trmt13	98	54.681	Astyanax_mexicanus
ENSORLG00015002270	trmt13	99	52.340	ENSBTAG00000015781	TRMT13	96	51.586	Bos_taurus
ENSORLG00015002270	trmt13	99	51.489	ENSCJAG00000000200	TRMT13	89	59.124	Callithrix_jacchus
ENSORLG00015002270	trmt13	66	49.367	ENSCAFG00000020021	TRMT13	98	49.367	Canis_familiaris
ENSORLG00015002270	trmt13	57	57.895	ENSCAFG00020011572	TRMT13	90	57.895	Canis_lupus_dingo
ENSORLG00015002270	trmt13	99	51.805	ENSCHIG00000015395	TRMT13	96	51.055	Capra_hircus
ENSORLG00015002270	trmt13	99	51.464	ENSTSYG00000010811	TRMT13	98	59.000	Carlito_syrichta
ENSORLG00015002270	trmt13	75	38.068	ENSCAPG00000009085	TRMT13	95	39.714	Cavia_aperea
ENSORLG00015002270	trmt13	98	52.146	ENSCPOG00000000694	TRMT13	96	52.146	Cavia_porcellus
ENSORLG00015002270	trmt13	99	52.654	ENSCCAG00000023772	TRMT13	96	52.654	Cebus_capucinus
ENSORLG00015002270	trmt13	99	52.654	ENSCATG00000033556	TRMT13	96	52.654	Cercocebus_atys
ENSORLG00015002270	trmt13	90	52.494	ENSCLAG00000008220	TRMT13	99	51.756	Chinchilla_lanigera
ENSORLG00015002270	trmt13	99	52.979	ENSCSAG00000001506	TRMT13	96	52.979	Chlorocebus_sabaeus
ENSORLG00015002270	trmt13	99	53.518	ENSCPBG00000026671	TRMT13	97	53.518	Chrysemys_picta_bellii
ENSORLG00015002270	trmt13	99	52.654	ENSCANG00000034659	TRMT13	96	52.654	Colobus_angolensis_palliatus
ENSORLG00015002270	trmt13	99	51.489	ENSCGRG00001021601	Trmt13	96	51.489	Cricetulus_griseus_chok1gshd
ENSORLG00015002270	trmt13	52	46.457	ENSCGRG00000000093	-	98	46.457	Cricetulus_griseus_crigri
ENSORLG00015002270	trmt13	99	65.132	ENSCSEG00000000591	trmt13	99	64.693	Cynoglossus_semilaevis
ENSORLG00015002270	trmt13	99	71.429	ENSCVAG00000017342	trmt13	95	71.429	Cyprinodon_variegatus
ENSORLG00015002270	trmt13	98	57.205	ENSDARG00000102846	trmt13	97	57.205	Danio_rerio
ENSORLG00015002270	trmt13	57	55.926	ENSDNOG00000001710	TRMT13	80	55.926	Dasypus_novemcinctus
ENSORLG00015002270	trmt13	99	51.812	ENSDORG00000015808	Trmt13	96	51.812	Dipodomys_ordii
ENSORLG00015002270	trmt13	98	35.684	FBgn0037435	CG18048	95	35.043	Drosophila_melanogaster
ENSORLG00015002270	trmt13	98	46.512	ENSETEG00000005819	TRMT13	96	46.737	Echinops_telfairi
ENSORLG00015002270	trmt13	97	45.356	ENSEBUG00000014444	trmt13	96	45.356	Eptatretus_burgeri
ENSORLG00015002270	trmt13	98	51.915	ENSEASG00005015918	TRMT13	96	51.915	Equus_asinus_asinus
ENSORLG00015002270	trmt13	98	51.702	ENSECAG00000022626	TRMT13	96	51.702	Equus_caballus
ENSORLG00015002270	trmt13	76	55.932	ENSEEUG00000000294	TRMT13	73	55.932	Erinaceus_europaeus
ENSORLG00015002270	trmt13	99	55.889	ENSELUG00000003803	trmt13	98	56.531	Esox_lucius
ENSORLG00015002270	trmt13	99	51.702	ENSFCAG00000030618	TRMT13	98	54.545	Felis_catus
ENSORLG00015002270	trmt13	98	54.664	ENSFALG00000002424	TRMT13	95	54.664	Ficedula_albicollis
ENSORLG00015002270	trmt13	99	50.833	ENSFDAG00000006342	TRMT13	97	50.833	Fukomys_damarensis
ENSORLG00015002270	trmt13	83	72.449	ENSFHEG00000022954	trmt13	99	71.744	Fundulus_heteroclitus
ENSORLG00015002270	trmt13	97	55.180	ENSGMOG00000013223	trmt13	99	55.405	Gadus_morhua
ENSORLG00015002270	trmt13	98	53.159	ENSGALG00000005290	TRMT13	96	53.247	Gallus_gallus
ENSORLG00015002270	trmt13	79	68.207	ENSGAFG00000001577	trmt13	81	68.750	Gambusia_affinis
ENSORLG00015002270	trmt13	99	71.116	ENSGACG00000013428	trmt13	99	71.335	Gasterosteus_aculeatus
ENSORLG00015002270	trmt13	99	53.191	ENSGAGG00000023303	TRMT13	96	59.259	Gopherus_agassizii
ENSORLG00015002270	trmt13	99	52.442	ENSGGOG00000005616	TRMT13	96	52.442	Gorilla_gorilla
ENSORLG00015002270	trmt13	99	71.179	ENSHBUG00000007754	trmt13	99	71.179	Haplochromis_burtoni
ENSORLG00015002270	trmt13	99	51.158	ENSHGLG00000002164	TRMT13	97	51.158	Heterocephalus_glaber_female
ENSORLG00015002270	trmt13	99	51.158	ENSHGLG00100001618	TRMT13	97	51.158	Heterocephalus_glaber_male
ENSORLG00015002270	trmt13	99	56.710	ENSHCOG00000020553	trmt13	99	56.494	Hippocampus_comes
ENSORLG00015002270	trmt13	98	55.459	ENSIPUG00000024787	trmt13	98	56.114	Ictalurus_punctatus
ENSORLG00015002270	trmt13	98	51.064	ENSSTOG00000013483	TRMT13	96	51.064	Ictidomys_tridecemlineatus
ENSORLG00015002270	trmt13	99	51.915	ENSJJAG00000018012	Trmt13	97	51.915	Jaculus_jaculus
ENSORLG00015002270	trmt13	65	69.697	ENSKMAG00000007639	trmt13	92	69.697	Kryptolebias_marmoratus
ENSORLG00015002270	trmt13	99	69.462	ENSLBEG00000020238	trmt13	100	69.462	Labrus_bergylta
ENSORLG00015002270	trmt13	99	52.665	ENSLACG00000013153	TRMT13	98	52.665	Latimeria_chalumnae
ENSORLG00015002270	trmt13	98	54.902	ENSLOCG00000000418	trmt13	97	54.902	Lepisosteus_oculatus
ENSORLG00015002270	trmt13	78	51.200	ENSLAFG00000002383	TRMT13	94	51.695	Loxodonta_africana
ENSORLG00015002270	trmt13	99	52.553	ENSMFAG00000034681	TRMT13	96	52.553	Macaca_fascicularis
ENSORLG00015002270	trmt13	99	52.553	ENSMMUG00000004243	TRMT13	96	52.553	Macaca_mulatta
ENSORLG00015002270	trmt13	99	52.553	ENSMNEG00000036102	TRMT13	96	52.553	Macaca_nemestrina
ENSORLG00015002270	trmt13	99	52.654	ENSMLEG00000034258	TRMT13	96	52.654	Mandrillus_leucophaeus
ENSORLG00015002270	trmt13	99	71.335	ENSMAMG00000016597	trmt13	97	71.335	Mastacembelus_armatus
ENSORLG00015002270	trmt13	99	70.678	ENSMZEG00005020959	trmt13	99	70.678	Maylandia_zebra
ENSORLG00015002270	trmt13	90	53.191	ENSMGAG00000006970	TRMT13	99	53.191	Meleagris_gallopavo
ENSORLG00015002270	trmt13	99	51.592	ENSMAUG00000010448	Trmt13	96	51.592	Mesocricetus_auratus
ENSORLG00015002270	trmt13	99	52.866	ENSMICG00000005283	TRMT13	96	54.286	Microcebus_murinus
ENSORLG00015002270	trmt13	99	51.805	ENSMOCG00000019914	Trmt13	96	51.805	Microtus_ochrogaster
ENSORLG00015002270	trmt13	58	63.534	ENSMMOG00000007762	trmt13	90	63.534	Mola_mola
ENSORLG00015002270	trmt13	99	50.947	ENSMODG00000003646	TRMT13	96	50.947	Monodelphis_domestica
ENSORLG00015002270	trmt13	99	67.834	ENSMALG00000020965	trmt13	98	67.325	Monopterus_albus
ENSORLG00015002270	trmt13	99	51.483	MGP_CAROLIEiJ_G0025568	Trmt13	76	75.000	Mus_caroli
ENSORLG00015002270	trmt13	99	51.695	ENSMUSG00000033439	Trmt13	94	56.571	Mus_musculus
ENSORLG00015002270	trmt13	99	51.271	MGP_PahariEiJ_G0027014	Trmt13	78	73.469	Mus_pahari
ENSORLG00015002270	trmt13	99	52.119	MGP_SPRETEiJ_G0026518	Trmt13	94	56.571	Mus_spretus
ENSORLG00015002270	trmt13	78	51.507	ENSMPUG00000002078	-	91	51.884	Mustela_putorius_furo
ENSORLG00015002270	trmt13	98	52.350	ENSMLUG00000002124	TRMT13	96	52.350	Myotis_lucifugus
ENSORLG00015002270	trmt13	98	66.225	ENSNBRG00000006783	trmt13	97	66.225	Neolamprologus_brichardi
ENSORLG00015002270	trmt13	99	52.442	ENSNLEG00000035917	TRMT13	96	52.442	Nomascus_leucogenys
ENSORLG00015002270	trmt13	51	49.372	ENSMEUG00000013346	-	94	49.372	Notamacropus_eugenii
ENSORLG00015002270	trmt13	67	56.015	ENSOPRG00000012048	TRMT13	63	56.015	Ochotona_princeps
ENSORLG00015002270	trmt13	99	71.179	ENSONIG00000004574	trmt13	99	71.179	Oreochromis_niloticus
ENSORLG00015002270	trmt13	91	52.995	ENSOANG00000012057	TRMT13	99	52.995	Ornithorhynchus_anatinus
ENSORLG00015002270	trmt13	98	51.606	ENSOCUG00000023095	TRMT13	96	51.606	Oryctolagus_cuniculus
ENSORLG00015002270	trmt13	100	89.783	ENSORLG00000003320	trmt13	100	89.783	Oryzias_latipes
ENSORLG00015002270	trmt13	98	90.265	ENSORLG00020005972	trmt13	98	90.265	Oryzias_latipes_hni
ENSORLG00015002270	trmt13	100	89.107	ENSOMEG00000006724	trmt13	95	89.107	Oryzias_melastigma
ENSORLG00015002270	trmt13	98	51.599	ENSOGAG00000005618	TRMT13	94	51.797	Otolemur_garnettii
ENSORLG00015002270	trmt13	99	51.805	ENSOARG00000017983	TRMT13	96	51.055	Ovis_aries
ENSORLG00015002270	trmt13	99	52.654	ENSPPAG00000043736	TRMT13	96	52.654	Pan_paniscus
ENSORLG00015002270	trmt13	99	51.702	ENSPPRG00000003424	TRMT13	98	54.545	Panthera_pardus
ENSORLG00015002270	trmt13	99	51.702	ENSPTIG00000018598	TRMT13	98	54.545	Panthera_tigris_altaica
ENSORLG00015002270	trmt13	99	52.654	ENSPTRG00000001001	TRMT13	96	52.654	Pan_troglodytes
ENSORLG00015002270	trmt13	99	52.654	ENSPANG00000007598	TRMT13	96	52.654	Papio_anubis
ENSORLG00015002270	trmt13	99	57.081	ENSPKIG00000001514	trmt13	99	57.081	Paramormyrops_kingsleyae
ENSORLG00015002270	trmt13	88	50.948	ENSPSIG00000012703	TRMT13	99	50.948	Pelodiscus_sinensis
ENSORLG00015002270	trmt13	100	60.907	ENSPMGG00000013298	trmt13	95	61.002	Periophthalmus_magnuspinnatus
ENSORLG00015002270	trmt13	99	51.271	ENSPEMG00000000275	Trmt13	96	50.636	Peromyscus_maniculatus_bairdii
ENSORLG00015002270	trmt13	98	47.401	ENSPMAG00000000823	trmt13	98	47.401	Petromyzon_marinus
ENSORLG00015002270	trmt13	100	51.351	ENSPCIG00000007699	TRMT13	99	51.559	Phascolarctos_cinereus
ENSORLG00015002270	trmt13	98	66.079	ENSPFOG00000008675	trmt13	96	66.079	Poecilia_formosa
ENSORLG00015002270	trmt13	99	66.667	ENSPLAG00000009709	trmt13	100	66.667	Poecilia_latipinna
ENSORLG00015002270	trmt13	99	66.231	ENSPMEG00000022954	trmt13	100	66.231	Poecilia_mexicana
ENSORLG00015002270	trmt13	82	68.766	ENSPREG00000005645	trmt13	94	64.211	Poecilia_reticulata
ENSORLG00015002270	trmt13	98	52.677	ENSPPYG00000001120	TRMT13	95	52.677	Pongo_abelii
ENSORLG00015002270	trmt13	99	51.173	ENSPCAG00000002340	TRMT13	96	50.533	Procavia_capensis
ENSORLG00015002270	trmt13	99	52.229	ENSPCOG00000017984	TRMT13	96	52.229	Propithecus_coquereli
ENSORLG00015002270	trmt13	98	52.026	ENSPVAG00000017430	TRMT13	96	52.026	Pteropus_vampyrus
ENSORLG00015002270	trmt13	99	68.122	ENSPNYG00000013690	trmt13	99	68.122	Pundamilia_nyererei
ENSORLG00015002270	trmt13	98	55.965	ENSPNAG00000022130	trmt13	98	55.965	Pygocentrus_nattereri
ENSORLG00015002270	trmt13	99	52.778	ENSRNOG00000015140	Trmt13	93	52.778	Rattus_norvegicus
ENSORLG00015002270	trmt13	99	52.654	ENSRBIG00000037686	TRMT13	96	52.654	Rhinopithecus_bieti
ENSORLG00015002270	trmt13	99	52.654	ENSRROG00000044057	TRMT13	96	52.654	Rhinopithecus_roxellana
ENSORLG00015002270	trmt13	99	52.654	ENSSBOG00000026541	TRMT13	96	52.654	Saimiri_boliviensis_boliviensis
ENSORLG00015002270	trmt13	93	50.787	ENSSHAG00000005213	TRMT13	97	50.787	Sarcophilus_harrisii
ENSORLG00015002270	trmt13	99	57.081	ENSSFOG00015017560	trmt13	98	57.081	Scleropages_formosus
ENSORLG00015002270	trmt13	99	68.094	ENSSMAG00000014592	trmt13	97	68.094	Scophthalmus_maximus
ENSORLG00015002270	trmt13	99	71.368	ENSSDUG00000015508	trmt13	97	71.670	Seriola_dumerili
ENSORLG00015002270	trmt13	99	70.613	ENSSLDG00000019060	trmt13	98	70.613	Seriola_lalandi_dorsalis
ENSORLG00015002270	trmt13	98	46.996	ENSSARG00000010344	TRMT13	97	46.996	Sorex_araneus
ENSORLG00015002270	trmt13	97	52.916	ENSSPUG00000016339	TRMT13	99	52.052	Sphenodon_punctatus
ENSORLG00015002270	trmt13	98	72.088	ENSSPAG00000011922	trmt13	99	72.391	Stegastes_partitus
ENSORLG00015002270	trmt13	99	52.966	ENSSSCG00000006869	TRMT13	96	52.966	Sus_scrofa
ENSORLG00015002270	trmt13	98	54.664	ENSTGUG00000005253	TRMT13	98	54.664	Taeniopygia_guttata
ENSORLG00015002270	trmt13	98	64.935	ENSTRUG00000008400	trmt13	99	64.957	Takifugu_rubripes
ENSORLG00015002270	trmt13	66	50.993	ENSTBEG00000008911	TRMT13	76	50.993	Tupaia_belangeri
ENSORLG00015002270	trmt13	99	51.386	ENSUAMG00000017251	TRMT13	96	51.173	Ursus_americanus
ENSORLG00015002270	trmt13	99	53.715	ENSUMAG00000007901	TRMT13	99	53.333	Ursus_maritimus
ENSORLG00015002270	trmt13	78	62.963	ENSVPAG00000001034	TRMT13	85	62.963	Vicugna_pacos
ENSORLG00015002270	trmt13	99	51.805	ENSVVUG00000021996	TRMT13	96	51.805	Vulpes_vulpes
ENSORLG00015002270	trmt13	99	52.298	ENSXETG00000013204	trmt13	98	52.298	Xenopus_tropicalis
ENSORLG00015002270	trmt13	99	65.142	ENSXMAG00000010765	trmt13	100	65.142	Xiphophorus_maculatus