EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015002292 (Gene tree)
Gene ID: -
Gene Symbol: larp4aa
Alias: -
Full Name: La ribonucleoprotein domain family%2C member 4Aa
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 14465 bases
Position: chr7:12004208-12018672
Accession: ZDB-GENE-090313-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001654	La	PF05383.17	2.3e-17	1	1
ENSORLP00015001679	La	PF05383.17	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012280	-	5396	-	ENSORLP00015001654	780 (aa)	-	-
ENSORLT00015012255	-	5438	-	ENSORLP00015001679	794 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015002292	larp4aa	67	40.942	ENSORLG00015020608	LARP4B	74	40.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002292	larp4aa	83	63.415	ENSG00000161813	LARP4	99	63.514	Homo_sapiens
ENSORLG00015002292	larp4aa	95	51.550	ENSAPOG00000021331	larp4ab	100	51.938	Acanthochromis_polyacanthus
ENSORLG00015002292	larp4aa	100	79.084	ENSAPOG00000007142	larp4aa	100	79.455	Acanthochromis_polyacanthus
ENSORLG00015002292	larp4aa	95	49.349	ENSAMEG00000001275	LARP4	99	50.392	Ailuropoda_melanoleuca
ENSORLG00015002292	larp4aa	100	75.441	ENSACIG00000001198	larp4aa	87	89.937	Amphilophus_citrinellus
ENSORLG00015002292	larp4aa	95	50.706	ENSAOCG00000006387	larp4ab	100	51.223	Amphiprion_ocellaris
ENSORLG00015002292	larp4aa	100	80.764	ENSAOCG00000002408	larp4aa	100	81.312	Amphiprion_ocellaris
ENSORLG00015002292	larp4aa	100	80.395	ENSAPEG00000019058	larp4aa	100	80.941	Amphiprion_percula
ENSORLG00015002292	larp4aa	100	79.345	ENSATEG00000020715	larp4aa	100	79.219	Anabas_testudineus
ENSORLG00015002292	larp4aa	95	48.087	ENSATEG00000001018	larp4ab	100	48.399	Anabas_testudineus
ENSORLG00015002292	larp4aa	95	50.504	ENSAPLG00000013661	LARP4	99	50.378	Anas_platyrhynchos
ENSORLG00015002292	larp4aa	95	49.803	ENSACAG00000017133	LARP4	96	50.458	Anolis_carolinensis
ENSORLG00015002292	larp4aa	87	61.509	ENSANAG00000029342	LARP4	99	63.102	Aotus_nancymaae
ENSORLG00015002292	larp4aa	100	75.616	ENSACLG00000002575	larp4aa	100	77.368	Astatotilapia_calliptera
ENSORLG00015002292	larp4aa	100	50.610	ENSAMXG00000001515	larp4ab	100	52.106	Astyanax_mexicanus
ENSORLG00015002292	larp4aa	100	63.779	ENSAMXG00000036493	larp4aa	100	64.501	Astyanax_mexicanus
ENSORLG00015002292	larp4aa	95	48.575	ENSBTAG00000017164	LARP4	99	49.288	Bos_taurus
ENSORLG00015002292	larp4aa	87	61.887	ENSCJAG00000021131	LARP4	99	61.887	Callithrix_jacchus
ENSORLG00015002292	larp4aa	95	48.892	ENSCAFG00000008174	LARP4	99	50.131	Canis_familiaris
ENSORLG00015002292	larp4aa	95	49.022	ENSCAFG00020014554	LARP4	99	60.071	Canis_lupus_dingo
ENSORLG00015002292	larp4aa	95	48.446	ENSCHIG00000025965	LARP4	99	49.159	Capra_hircus
ENSORLG00015002292	larp4aa	83	63.144	ENSTSYG00000004342	LARP4	99	63.243	Carlito_syrichta
ENSORLG00015002292	larp4aa	94	38.778	ENSCAPG00000012942	LARP4	99	38.645	Cavia_aperea
ENSORLG00015002292	larp4aa	95	45.216	ENSCPOG00000020519	LARP4	99	45.872	Cavia_porcellus
ENSORLG00015002292	larp4aa	87	60.755	ENSCCAG00000024439	LARP4	99	62.567	Cebus_capucinus
ENSORLG00015002292	larp4aa	95	47.266	ENSCATG00000044528	LARP4	99	48.114	Cercocebus_atys
ENSORLG00015002292	larp4aa	95	48.828	ENSCLAG00000001829	LARP4	99	49.479	Chinchilla_lanigera
ENSORLG00015002292	larp4aa	95	51.157	ENSCPBG00000019407	LARP4	90	51.671	Chrysemys_picta_bellii
ENSORLG00015002292	larp4aa	83	64.499	ENSCANG00000029159	-	99	64.595	Colobus_angolensis_palliatus
ENSORLG00015002292	larp4aa	85	54.753	ENSCANG00000033097	-	99	55.385	Colobus_angolensis_palliatus
ENSORLG00015002292	larp4aa	95	49.869	ENSCGRG00001010818	Larp4	99	50.850	Cricetulus_griseus_chok1gshd
ENSORLG00015002292	larp4aa	95	49.869	ENSCGRG00000009382	Larp4	100	50.850	Cricetulus_griseus_crigri
ENSORLG00015002292	larp4aa	100	75.275	ENSCSEG00000001963	larp4aa	100	75.520	Cynoglossus_semilaevis
ENSORLG00015002292	larp4aa	61	52.079	ENSCSEG00000003240	larp4ab	92	47.653	Cynoglossus_semilaevis
ENSORLG00015002292	larp4aa	100	77.284	ENSCVAG00000005488	larp4aa	100	77.531	Cyprinodon_variegatus
ENSORLG00015002292	larp4aa	95	50.779	ENSDARG00000074979	larp4ab	81	83.916	Danio_rerio
ENSORLG00015002292	larp4aa	100	62.685	ENSDARG00000078401	larp4aa	100	62.577	Danio_rerio
ENSORLG00015002292	larp4aa	95	48.512	ENSDNOG00000038525	LARP4	99	49.354	Dasypus_novemcinctus
ENSORLG00015002292	larp4aa	95	46.641	ENSDORG00000004013	Larp4	99	47.539	Dipodomys_ordii
ENSORLG00015002292	larp4aa	54	85.926	ENSETEG00000011683	LARP4	57	85.926	Echinops_telfairi
ENSORLG00015002292	larp4aa	58	42.245	ENSEBUG00000004426	LARP4	82	41.752	Eptatretus_burgeri
ENSORLG00015002292	larp4aa	53	56.589	ENSEBUG00000010394	LARP4	84	39.254	Eptatretus_burgeri
ENSORLG00015002292	larp4aa	83	58.974	ENSEASG00005004356	LARP4	100	58.974	Equus_asinus_asinus
ENSORLG00015002292	larp4aa	95	49.150	ENSECAG00000012479	LARP4	99	50.776	Equus_caballus
ENSORLG00015002292	larp4aa	69	84.615	ENSEEUG00000000316	LARP4	69	84.615	Erinaceus_europaeus
ENSORLG00015002292	larp4aa	100	58.931	ENSELUG00000000395	larp4aa	94	65.278	Esox_lucius
ENSORLG00015002292	larp4aa	95	53.042	ENSELUG00000018650	larp4ab	88	79.386	Esox_lucius
ENSORLG00015002292	larp4aa	83	64.247	ENSFCAG00000031897	LARP4	99	63.926	Felis_catus
ENSORLG00015002292	larp4aa	64	57.439	ENSFALG00000002114	LARP4	95	52.511	Ficedula_albicollis
ENSORLG00015002292	larp4aa	95	49.347	ENSFDAG00000006406	-	99	49.869	Fukomys_damarensis
ENSORLG00015002292	larp4aa	100	76.132	ENSFHEG00000004338	larp4aa	100	76.132	Fundulus_heteroclitus
ENSORLG00015002292	larp4aa	95	47.197	ENSFHEG00000013854	larp4ab	99	47.128	Fundulus_heteroclitus
ENSORLG00015002292	larp4aa	100	69.847	ENSGMOG00000008246	larp4aa	100	70.356	Gadus_morhua
ENSORLG00015002292	larp4aa	91	49.217	ENSGALG00000042122	LARP4	92	51.061	Gallus_gallus
ENSORLG00015002292	larp4aa	95	48.329	ENSGAFG00000021777	larp4ab	99	48.370	Gambusia_affinis
ENSORLG00015002292	larp4aa	95	47.893	ENSGACG00000000680	larp4ab	97	51.026	Gasterosteus_aculeatus
ENSORLG00015002292	larp4aa	100	75.761	ENSGACG00000008381	larp4aa	98	83.934	Gasterosteus_aculeatus
ENSORLG00015002292	larp4aa	95	51.026	ENSGAGG00000006969	LARP4	99	51.538	Gopherus_agassizii
ENSORLG00015002292	larp4aa	95	47.382	ENSGGOG00000015230	LARP4	99	61.509	Gorilla_gorilla
ENSORLG00015002292	larp4aa	100	75.369	ENSHBUG00000023074	larp4aa	100	77.122	Haplochromis_burtoni
ENSORLG00015002292	larp4aa	84	51.339	ENSHGLG00000005513	-	96	51.263	Heterocephalus_glaber_female
ENSORLG00015002292	larp4aa	81	49.377	ENSHGLG00000013875	-	96	48.830	Heterocephalus_glaber_female
ENSORLG00015002292	larp4aa	95	47.820	ENSHGLG00100011678	-	99	47.820	Heterocephalus_glaber_male
ENSORLG00015002292	larp4aa	95	49.022	ENSHGLG00100016984	-	99	49.025	Heterocephalus_glaber_male
ENSORLG00015002292	larp4aa	95	45.817	ENSHCOG00000020857	larp4ab	100	45.269	Hippocampus_comes
ENSORLG00015002292	larp4aa	100	70.186	ENSHCOG00000015951	larp4aa	100	70.260	Hippocampus_comes
ENSORLG00015002292	larp4aa	95	47.424	ENSIPUG00000021659	larp4ab	99	48.606	Ictalurus_punctatus
ENSORLG00015002292	larp4aa	100	61.520	ENSIPUG00000007514	larp4aa	100	62.119	Ictalurus_punctatus
ENSORLG00015002292	larp4aa	95	49.294	ENSSTOG00000003553	LARP4	99	50.914	Ictidomys_tridecemlineatus
ENSORLG00015002292	larp4aa	100	77.543	ENSKMAG00000006800	larp4aa	100	77.958	Kryptolebias_marmoratus
ENSORLG00015002292	larp4aa	95	48.900	ENSKMAG00000018556	larp4ab	100	49.221	Kryptolebias_marmoratus
ENSORLG00015002292	larp4aa	95	48.768	ENSLBEG00000019306	larp4ab	100	49.025	Labrus_bergylta
ENSORLG00015002292	larp4aa	97	77.239	ENSLBEG00000014537	larp4aa	100	76.253	Labrus_bergylta
ENSORLG00015002292	larp4aa	95	51.266	ENSLACG00000019090	LARP4	99	51.392	Latimeria_chalumnae
ENSORLG00015002292	larp4aa	100	58.867	ENSLOCG00000007113	larp4ab	100	59.606	Lepisosteus_oculatus
ENSORLG00015002292	larp4aa	95	48.037	ENSLAFG00000005160	LARP4	99	49.281	Loxodonta_africana
ENSORLG00015002292	larp4aa	83	64.228	ENSMFAG00000043681	LARP4	99	63.784	Macaca_fascicularis
ENSORLG00015002292	larp4aa	83	64.228	ENSMMUG00000008172	LARP4	99	63.784	Macaca_mulatta
ENSORLG00015002292	larp4aa	71	66.964	ENSMNEG00000037799	-	84	66.964	Macaca_nemestrina
ENSORLG00015002292	larp4aa	94	47.270	ENSMNEG00000034602	LARP4	98	48.005	Macaca_nemestrina
ENSORLG00015002292	larp4aa	83	63.686	ENSMLEG00000039661	LARP4	99	63.784	Mandrillus_leucophaeus
ENSORLG00015002292	larp4aa	100	79.655	ENSMAMG00000011206	larp4aa	100	79.038	Mastacembelus_armatus
ENSORLG00015002292	larp4aa	95	49.870	ENSMAMG00000002616	larp4ab	100	49.935	Mastacembelus_armatus
ENSORLG00015002292	larp4aa	100	75.739	ENSMZEG00005001813	larp4aa	100	77.245	Maylandia_zebra
ENSORLG00015002292	larp4aa	91	48.442	ENSMGAG00000010598	LARP4	92	51.323	Meleagris_gallopavo
ENSORLG00015002292	larp4aa	70	77.308	ENSMICG00000012388	-	97	83.974	Microcebus_murinus
ENSORLG00015002292	larp4aa	69	57.258	ENSMICG00000030156	-	99	57.258	Microcebus_murinus
ENSORLG00015002292	larp4aa	95	50.590	ENSMOCG00000020635	Larp4	99	50.785	Microtus_ochrogaster
ENSORLG00015002292	larp4aa	100	72.953	ENSMMOG00000004785	larp4aa	100	72.716	Mola_mola
ENSORLG00015002292	larp4aa	95	46.899	ENSMMOG00000021861	larp4ab	92	57.542	Mola_mola
ENSORLG00015002292	larp4aa	72	64.798	MGP_CAROLIEiJ_G0020281	Larp4	83	64.526	Mus_caroli
ENSORLG00015002292	larp4aa	95	48.294	ENSMUSG00000023025	Larp4	99	49.858	Mus_musculus
ENSORLG00015002292	larp4aa	95	49.413	MGP_PahariEiJ_G0020284	Larp4	99	50.131	Mus_pahari
ENSORLG00015002292	larp4aa	95	49.213	ENSMPUG00000008706	LARP4	96	50.066	Mustela_putorius_furo
ENSORLG00015002292	larp4aa	95	47.843	ENSMLUG00000012513	-	99	48.825	Myotis_lucifugus
ENSORLG00015002292	larp4aa	95	48.037	ENSNGAG00000001577	-	99	48.956	Nannospalax_galili
ENSORLG00015002292	larp4aa	100	76.015	ENSNBRG00000011292	larp4aa	100	77.122	Neolamprologus_brichardi
ENSORLG00015002292	larp4aa	83	63.686	ENSNLEG00000017798	LARP4	99	63.784	Nomascus_leucogenys
ENSORLG00015002292	larp4aa	95	49.215	ENSODEG00000009770	LARP4	100	50.000	Octodon_degus
ENSORLG00015002292	larp4aa	100	76.855	ENSONIG00000011895	larp4aa	100	77.889	Oreochromis_niloticus
ENSORLG00015002292	larp4aa	95	48.903	ENSONIG00000019124	larp4ab	99	48.072	Oreochromis_niloticus
ENSORLG00015002292	larp4aa	64	56.084	ENSOANG00000004373	LARP4	92	56.654	Ornithorhynchus_anatinus
ENSORLG00015002292	larp4aa	95	49.025	ENSOCUG00000026872	-	99	49.351	Oryctolagus_cuniculus
ENSORLG00015002292	larp4aa	95	49.025	ENSOCUG00000021417	-	99	49.610	Oryctolagus_cuniculus
ENSORLG00015002292	larp4aa	100	98.741	ENSORLG00000006758	larp4aa	100	98.741	Oryzias_latipes
ENSORLG00015002292	larp4aa	100	98.866	ENSORLG00020010258	larp4aa	100	98.866	Oryzias_latipes_hni
ENSORLG00015002292	larp4aa	100	85.069	ENSOMEG00000019749	larp4aa	96	94.857	Oryzias_melastigma
ENSORLG00015002292	larp4aa	64	53.788	ENSOGAG00000001415	LARP4	99	54.857	Otolemur_garnettii
ENSORLG00015002292	larp4aa	95	48.575	ENSOARG00000017702	LARP4	99	49.288	Ovis_aries
ENSORLG00015002292	larp4aa	77	63.325	ENSPPAG00000035100	LARP4	99	63.514	Pan_paniscus
ENSORLG00015002292	larp4aa	83	64.247	ENSPPRG00000004522	LARP4	99	63.926	Panthera_pardus
ENSORLG00015002292	larp4aa	83	64.247	ENSPTIG00000015617	LARP4	99	63.926	Panthera_tigris_altaica
ENSORLG00015002292	larp4aa	83	63.144	ENSPTRG00000004935	LARP4	99	63.243	Pan_troglodytes
ENSORLG00015002292	larp4aa	83	64.228	ENSPANG00000022964	LARP4	99	64.324	Papio_anubis
ENSORLG00015002292	larp4aa	100	57.895	ENSPKIG00000005950	larp4ab	100	57.775	Paramormyrops_kingsleyae
ENSORLG00015002292	larp4aa	96	49.225	ENSPSIG00000015867	LARP4	100	49.550	Pelodiscus_sinensis
ENSORLG00015002292	larp4aa	95	48.497	ENSPEMG00000018433	Larp4	99	49.478	Peromyscus_maniculatus_bairdii
ENSORLG00015002292	larp4aa	52	57.708	ENSPMAG00000002788	LARP4	97	41.176	Petromyzon_marinus
ENSORLG00015002292	larp4aa	96	49.166	ENSPCIG00000000384	LARP4	99	49.935	Phascolarctos_cinereus
ENSORLG00015002292	larp4aa	100	75.802	ENSPFOG00000013148	larp4aa	100	75.616	Poecilia_formosa
ENSORLG00015002292	larp4aa	95	48.635	ENSPFOG00000009764	larp4ab	99	49.014	Poecilia_formosa
ENSORLG00015002292	larp4aa	100	75.503	ENSPLAG00000013626	larp4aa	100	75.313	Poecilia_latipinna
ENSORLG00015002292	larp4aa	95	48.501	ENSPLAG00000008502	larp4ab	99	48.748	Poecilia_latipinna
ENSORLG00015002292	larp4aa	100	75.616	ENSPMEG00000014271	larp4aa	100	75.676	Poecilia_mexicana
ENSORLG00015002292	larp4aa	95	48.052	ENSPMEG00000002720	larp4ab	99	48.816	Poecilia_mexicana
ENSORLG00015002292	larp4aa	100	75.910	ENSPREG00000022597	larp4aa	100	75.845	Poecilia_reticulata
ENSORLG00015002292	larp4aa	64	57.171	ENSPPYG00000004512	-	99	57.752	Pongo_abelii
ENSORLG00015002292	larp4aa	77	66.897	ENSPCAG00000003671	LARP4	84	66.897	Procavia_capensis
ENSORLG00015002292	larp4aa	83	63.686	ENSPCOG00000026291	LARP4	99	63.784	Propithecus_coquereli
ENSORLG00015002292	larp4aa	100	75.616	ENSPNYG00000022265	larp4aa	100	77.368	Pundamilia_nyererei
ENSORLG00015002292	larp4aa	95	52.994	ENSPNAG00000014478	larp4ab	99	54.209	Pygocentrus_nattereri
ENSORLG00015002292	larp4aa	96	61.731	ENSPNAG00000024770	larp4aa	99	62.672	Pygocentrus_nattereri
ENSORLG00015002292	larp4aa	81	55.470	ENSRBIG00000038857	-	92	63.784	Rhinopithecus_bieti
ENSORLG00015002292	larp4aa	69	54.864	ENSRBIG00000036890	-	99	54.864	Rhinopithecus_bieti
ENSORLG00015002292	larp4aa	83	63.686	ENSRROG00000042764	-	99	63.784	Rhinopithecus_roxellana
ENSORLG00015002292	larp4aa	69	54.864	ENSRROG00000025487	-	99	54.864	Rhinopithecus_roxellana
ENSORLG00015002292	larp4aa	87	60.755	ENSSBOG00000026650	LARP4	99	62.032	Saimiri_boliviensis_boliviensis
ENSORLG00015002292	larp4aa	100	58.434	ENSSFOG00015014096	larp4ab	100	58.696	Scleropages_formosus
ENSORLG00015002292	larp4aa	95	61.905	ENSSFOG00015003868	larp4aa	99	62.113	Scleropages_formosus
ENSORLG00015002292	larp4aa	100	77.379	ENSSMAG00000019473	larp4aa	100	77.998	Scophthalmus_maximus
ENSORLG00015002292	larp4aa	95	48.241	ENSSMAG00000002838	larp4ab	100	49.308	Scophthalmus_maximus
ENSORLG00015002292	larp4aa	100	78.792	ENSSDUG00000010621	larp4aa	100	80.518	Seriola_dumerili
ENSORLG00015002292	larp4aa	95	51.216	ENSSDUG00000006655	larp4ab	100	50.701	Seriola_dumerili
ENSORLG00015002292	larp4aa	95	50.575	ENSSLDG00000001791	larp4ab	100	51.662	Seriola_lalandi_dorsalis
ENSORLG00015002292	larp4aa	100	78.792	ENSSLDG00000004942	larp4aa	100	79.901	Seriola_lalandi_dorsalis
ENSORLG00015002292	larp4aa	64	62.500	ENSSARG00000012469	LARP4	89	55.920	Sorex_araneus
ENSORLG00015002292	larp4aa	90	48.309	ENSSPUG00000016552	LARP4	92	50.409	Sphenodon_punctatus
ENSORLG00015002292	larp4aa	87	88.321	ENSSPAG00000007222	larp4aa	93	90.840	Stegastes_partitus
ENSORLG00015002292	larp4aa	95	50.777	ENSSPAG00000002172	larp4ab	100	51.226	Stegastes_partitus
ENSORLG00015002292	larp4aa	95	49.089	ENSSSCG00000028516	LARP4	98	60.099	Sus_scrofa
ENSORLG00015002292	larp4aa	95	49.161	ENSTGUG00000003479	LARP4	99	51.034	Taeniopygia_guttata
ENSORLG00015002292	larp4aa	64	54.721	ENSTRUG00000007206	larp4ab	100	47.287	Takifugu_rubripes
ENSORLG00015002292	larp4aa	95	71.448	ENSTNIG00000015109	larp4aa	99	71.182	Tetraodon_nigroviridis
ENSORLG00015002292	larp4aa	95	45.013	ENSTNIG00000014571	larp4ab	100	45.013	Tetraodon_nigroviridis
ENSORLG00015002292	larp4aa	80	54.118	ENSTBEG00000005167	LARP4	99	42.503	Tupaia_belangeri
ENSORLG00015002292	larp4aa	95	47.668	ENSTTRG00000003764	LARP4	99	47.860	Tursiops_truncatus
ENSORLG00015002292	larp4aa	65	55.871	ENSUAMG00000013764	LARP4	97	58.027	Ursus_americanus
ENSORLG00015002292	larp4aa	95	49.675	ENSUMAG00000008473	LARP4	99	50.587	Ursus_maritimus
ENSORLG00015002292	larp4aa	95	47.294	ENSVPAG00000010136	LARP4	99	48.320	Vicugna_pacos
ENSORLG00015002292	larp4aa	95	48.831	ENSVVUG00000024717	LARP4	99	60.071	Vulpes_vulpes
ENSORLG00015002292	larp4aa	86	52.035	ENSXETG00000007283	larp4	95	52.168	Xenopus_tropicalis
ENSORLG00015002292	larp4aa	100	71.960	ENSXCOG00000006387	larp4aa	100	71.747	Xiphophorus_couchianus
ENSORLG00015002292	larp4aa	100	77.228	ENSXMAG00000010519	larp4aa	100	76.020	Xiphophorus_maculatus
ENSORLG00015002292	larp4aa	95	49.478	ENSXMAG00000002156	larp4ab	99	49.089	Xiphophorus_maculatus