EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015002397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 8276 bases
Position: chr11:12527445-12535720
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001658	GTP_EFTU	PF00009.27	3.4e-54	1	1
ENSORLP00015001763	GTP_EFTU	PF00009.27	2.1e-53	1	1
ENSORLP00015001692	GTP_EFTU	PF00009.27	2.2e-53	1	1
ENSORLP00015022748	GTP_EFTU	PF00009.27	2.4e-53	1	1
ENSORLP00015022782	GTP_EFTU	PF00009.27	2.5e-53	1	1
ENSORLP00015001767	GTP_EFTU	PF00009.27	2.6e-53	1	1
ENSORLP00015022800	GTP_EFTU	PF00009.27	2.6e-53	1	1
ENSORLP00015001716	GTP_EFTU	PF00009.27	2.6e-53	1	1
ENSORLP00015001728	GTP_EFTU	PF00009.27	2.6e-53	1	1
ENSORLP00015001678	GTP_EFTU	PF00009.27	9.3e-39	1	1
ENSORLP00015001692	GTP_EFTU_D2	PF03144.25	1.1e-14	1	1
ENSORLP00015022800	GTP_EFTU_D2	PF03144.25	1.2e-14	1	1
ENSORLP00015022782	GTP_EFTU_D2	PF03144.25	1.3e-14	1	1
ENSORLP00015022748	GTP_EFTU_D2	PF03144.25	1.3e-14	1	1
ENSORLP00015001763	GTP_EFTU_D2	PF03144.25	2.5e-14	1	1
ENSORLP00015001767	GTP_EFTU_D2	PF03144.25	2.5e-14	1	1
ENSORLP00015001716	GTP_EFTU_D2	PF03144.25	2.9e-14	1	1
ENSORLP00015001728	GTP_EFTU_D2	PF03144.25	2.9e-14	1	1
ENSORLP00015001678	GTP_EFTU_D2	PF03144.25	4.2e-14	1	1
ENSORLP00015001658	GTP_EFTU_D2	PF03144.25	4.5e-14	1	1
ENSORLP00015001692	GTP_EFTU_D3	PF03143.17	5.2e-42	1	1
ENSORLP00015022748	GTP_EFTU_D3	PF03143.17	1.7e-41	1	1
ENSORLP00015022800	GTP_EFTU_D3	PF03143.17	4.7e-41	1	1
ENSORLP00015001658	GTP_EFTU_D3	PF03143.17	1.4e-40	1	1
ENSORLP00015001716	GTP_EFTU_D3	PF03143.17	1.4e-40	1	1
ENSORLP00015001728	GTP_EFTU_D3	PF03143.17	1.4e-40	1	1
ENSORLP00015001763	GTP_EFTU_D3	PF03143.17	1.4e-40	1	1
ENSORLP00015001767	GTP_EFTU_D3	PF03143.17	1.4e-40	1	1
ENSORLP00015001678	GTP_EFTU_D3	PF03143.17	1.6e-40	1	1
ENSORLP00015022782	GTP_EFTU_D3	PF03143.17	8.5e-39	1	2
ENSORLP00015022782	GTP_EFTU_D3	PF03143.17	8.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015012091	-	1986	-	ENSORLP00015001767	462 (aa)	-	-
ENSORLT00015012170	-	1986	-	ENSORLP00015001716	462 (aa)	-	-
ENSORLT00015012192	-	4246	-	ENSORLP00015022782	487 (aa)	-	-
ENSORLT00015012104	-	1986	-	ENSORLP00015001763	462 (aa)	-	-
ENSORLT00015012152	-	1986	-	ENSORLP00015001728	462 (aa)	-	-
ENSORLT00015012254	-	2576	-	ENSORLP00015001678	482 (aa)	-	-
ENSORLT00015012210	-	3831	-	ENSORLP00015001692	461 (aa)	-	-
ENSORLT00015012118	-	1986	-	ENSORLP00015022800	462 (aa)	-	-
ENSORLT00015012284	-	1389	-	ENSORLP00015001658	462 (aa)	-	-
ENSORLT00015012243	-	1392	-	ENSORLP00015022748	463 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015002397	-	96	38.826	ENSORLG00015008971	gspt1l	81	38.914
ENSORLG00015002397	-	94	30.045	ENSORLG00015003107	tufm	86	30.045
ENSORLG00015002397	-	96	86.036	ENSORLG00015004929	-	72	97.222
ENSORLG00015002397	-	95	38.409	ENSORLG00015005515	-	84	37.020
ENSORLG00015002397	-	96	71.332	ENSORLG00015008410	si:dkey-37o8.1	97	71.332
ENSORLG00015002397	-	95	41.190	ENSORLG00015023105	hbs1l	61	41.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002397	-	100	95.011	ENSAPOG00000004714	-	100	95.011	Acanthochromis_polyacanthus
ENSORLG00015002397	-	90	94.915	ENSACIG00000001219	-	97	95.037	Amphilophus_citrinellus
ENSORLG00015002397	-	87	96.278	ENSAOCG00000022002	-	100	94.699	Amphiprion_ocellaris
ENSORLG00015002397	-	100	92.225	ENSAOCG00000022039	-	100	92.225	Amphiprion_ocellaris
ENSORLG00015002397	-	100	92.225	ENSAPEG00000016361	-	100	92.225	Amphiprion_percula
ENSORLG00015002397	-	98	95.787	ENSATEG00000003244	-	97	93.952	Anabas_testudineus
ENSORLG00015002397	-	100	95.011	ENSACLG00000022560	-	98	95.122	Astatotilapia_calliptera
ENSORLG00015002397	-	100	83.801	WBGene00001169	eef-1A.2	99	83.801	Caenorhabditis_elegans
ENSORLG00015002397	-	100	83.801	WBGene00001168	eef-1A.1	99	83.801	Caenorhabditis_elegans
ENSORLG00015002397	-	99	84.967	ENSCING00000021478	-	99	84.967	Ciona_intestinalis
ENSORLG00015002397	-	100	80.472	ENSCING00000007703	-	99	80.472	Ciona_intestinalis
ENSORLG00015002397	-	98	81.718	ENSCING00000018894	-	99	81.681	Ciona_intestinalis
ENSORLG00015002397	-	98	82.018	ENSCING00000005126	-	100	81.974	Ciona_intestinalis
ENSORLG00015002397	-	99	77.174	ENSCSAVG00000001085	-	91	77.174	Ciona_savignyi
ENSORLG00015002397	-	99	85.153	ENSCSAVG00000006357	-	98	94.000	Ciona_savignyi
ENSORLG00015002397	-	98	83.736	ENSCSAVG00000009663	-	100	83.656	Ciona_savignyi
ENSORLG00015002397	-	98	81.304	ENSCSAVG00000003196	-	100	81.277	Ciona_savignyi
ENSORLG00015002397	-	90	88.164	ENSCSEG00000007972	-	100	88.164	Cynoglossus_semilaevis
ENSORLG00015002397	-	98	95.344	ENSCSEG00000008011	-	100	93.737	Cynoglossus_semilaevis
ENSORLG00015002397	-	89	86.925	ENSCSEG00000007992	-	99	86.925	Cynoglossus_semilaevis
ENSORLG00015002397	-	100	97.831	ENSCVAG00000019356	-	100	97.831	Cyprinodon_variegatus
ENSORLG00015002397	-	100	86.364	FBgn0284245	eEF1alpha1	99	86.364	Drosophila_melanogaster
ENSORLG00015002397	-	98	86.947	FBgn0000557	eEF1alpha2	100	86.580	Drosophila_melanogaster
ENSORLG00015002397	-	99	84.382	ENSEBUG00000015814	-	100	84.382	Eptatretus_burgeri
ENSORLG00015002397	-	100	98.485	ENSFHEG00000015054	-	100	98.485	Fundulus_heteroclitus
ENSORLG00015002397	-	100	97.180	ENSGAFG00000014646	-	100	97.180	Gambusia_affinis
ENSORLG00015002397	-	98	95.565	ENSGACG00000002182	-	100	94.168	Gasterosteus_aculeatus
ENSORLG00015002397	-	100	93.275	ENSGACG00000002143	-	100	91.577	Gasterosteus_aculeatus
ENSORLG00015002397	-	55	92.857	ENSHBUG00000017166	-	95	89.370	Haplochromis_burtoni
ENSORLG00015002397	-	98	94.678	ENSHCOG00000008468	-	100	93.305	Hippocampus_comes
ENSORLG00015002397	-	99	86.551	ENSHCOG00000008489	-	100	86.551	Hippocampus_comes
ENSORLG00015002397	-	98	94.900	ENSLBEG00000002759	-	100	93.305	Labrus_bergylta
ENSORLG00015002397	-	99	85.900	ENSLBEG00000002955	-	100	85.900	Labrus_bergylta
ENSORLG00015002397	-	100	97.180	ENSMAMG00000007715	-	100	97.180	Mastacembelus_armatus
ENSORLG00015002397	-	99	87.419	ENSMMOG00000001106	-	99	87.419	Mola_mola
ENSORLG00015002397	-	100	76.407	ENSMMOG00000018160	-	100	89.130	Mola_mola
ENSORLG00015002397	-	98	94.013	ENSMMOG00000001165	-	100	96.591	Mola_mola
ENSORLG00015002397	-	100	84.599	ENSNBRG00000017346	-	99	82.721	Neolamprologus_brichardi
ENSORLG00015002397	-	76	92.330	ENSONIG00000017760	-	98	92.330	Oreochromis_niloticus
ENSORLG00015002397	-	100	99.783	ENSORLG00000007614	eef1a	100	99.783	Oryzias_latipes
ENSORLG00015002397	-	100	98.915	ENSOMEG00000018226	-	100	98.915	Oryzias_melastigma
ENSORLG00015002397	-	94	50.115	ENSPMGG00000022427	-	97	61.250	Periophthalmus_magnuspinnatus
ENSORLG00015002397	-	98	95.133	ENSPMGG00000023911	-	100	100.000	Periophthalmus_magnuspinnatus
ENSORLG00015002397	-	100	97.180	ENSPFOG00000003924	-	100	97.094	Poecilia_formosa
ENSORLG00015002397	-	100	97.180	ENSPLAG00000004316	-	100	97.180	Poecilia_latipinna
ENSORLG00015002397	-	100	96.963	ENSPMEG00000001010	-	100	96.963	Poecilia_mexicana
ENSORLG00015002397	-	100	97.619	ENSPREG00000008243	-	100	97.619	Poecilia_reticulata
ENSORLG00015002397	-	100	95.011	ENSPNYG00000007263	-	98	95.122	Pundamilia_nyererei
ENSORLG00015002397	-	97	81.124	YBR118W	TEF2	100	80.477	Saccharomyces_cerevisiae
ENSORLG00015002397	-	97	81.124	YPR080W	TEF1	100	80.477	Saccharomyces_cerevisiae
ENSORLG00015002397	-	98	83.510	ENSSMAG00000018469	-	100	82.887	Scophthalmus_maximus
ENSORLG00015002397	-	53	93.033	ENSSMAG00000016277	-	100	91.406	Scophthalmus_maximus
ENSORLG00015002397	-	100	96.746	ENSSDUG00000008198	-	100	96.746	Seriola_dumerili
ENSORLG00015002397	-	98	94.457	ENSSPAG00000001710	-	98	94.457	Stegastes_partitus
ENSORLG00015002397	-	99	87.202	ENSTRUG00000005066	-	99	87.202	Takifugu_rubripes
ENSORLG00015002397	-	98	94.678	ENSTRUG00000005727	ef-1a	100	93.521	Takifugu_rubripes
ENSORLG00015002397	-	97	86.161	ENSTNIG00000002617	-	94	86.161	Tetraodon_nigroviridis
ENSORLG00015002397	-	98	95.344	ENSTNIG00000002619	-	100	94.384	Tetraodon_nigroviridis
ENSORLG00015002397	-	100	97.180	ENSXCOG00000001542	-	100	97.778	Xiphophorus_couchianus