EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015002588 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 1094 bases
Position: chr1:13131692-13132785
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015001948	zf-CCCH	PF00642.24	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015011794	-	995	-	ENSORLP00015001948	246 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002588	si:ch211-113e8.11	100	55.769	ENSAPOG00000010990	si:ch211-113e8.11	100	58.846	Acanthochromis_polyacanthus
ENSORLG00015002588	si:ch211-113e8.11	58	65.517	ENSACIG00000011566	si:ch211-113e8.11	91	60.204	Amphilophus_citrinellus
ENSORLG00015002588	si:ch211-113e8.11	100	56.977	ENSAOCG00000022156	si:ch211-113e8.11	100	58.140	Amphiprion_ocellaris
ENSORLG00015002588	si:ch211-113e8.11	100	56.589	ENSAPEG00000018284	si:ch211-113e8.11	100	57.752	Amphiprion_percula
ENSORLG00015002588	si:ch211-113e8.11	100	56.917	ENSATEG00000018391	si:ch211-113e8.11	100	55.731	Anabas_testudineus
ENSORLG00015002588	si:ch211-113e8.11	100	58.635	ENSACLG00000017011	si:ch211-113e8.11	100	59.839	Astatotilapia_calliptera
ENSORLG00015002588	si:ch211-113e8.11	97	47.674	ENSAMXG00000000733	si:ch211-113e8.11	97	48.249	Astyanax_mexicanus
ENSORLG00015002588	si:ch211-113e8.11	99	55.686	ENSCSEG00000004538	si:ch211-113e8.11	99	55.294	Cynoglossus_semilaevis
ENSORLG00015002588	si:ch211-113e8.11	100	54.980	ENSCVAG00000020156	si:ch211-113e8.11	99	53.846	Cyprinodon_variegatus
ENSORLG00015002588	si:ch211-113e8.11	96	42.324	ENSDARG00000076585	si:ch211-113e8.11	98	46.245	Danio_rerio
ENSORLG00015002588	si:ch211-113e8.11	58	31.126	FBgn0259728	CG42382	63	31.783	Drosophila_melanogaster
ENSORLG00015002588	si:ch211-113e8.11	99	52.593	ENSELUG00000001130	si:ch211-113e8.11	99	45.956	Esox_lucius
ENSORLG00015002588	si:ch211-113e8.11	100	51.004	ENSFHEG00000007870	si:ch211-113e8.11	99	49.213	Fundulus_heteroclitus
ENSORLG00015002588	si:ch211-113e8.11	100	54.545	ENSGAFG00000020570	si:ch211-113e8.11	100	54.941	Gambusia_affinis
ENSORLG00015002588	si:ch211-113e8.11	100	57.708	ENSHBUG00000003552	si:ch211-113e8.11	100	58.893	Haplochromis_burtoni
ENSORLG00015002588	si:ch211-113e8.11	99	47.347	ENSHCOG00000002041	si:ch211-113e8.11	99	46.032	Hippocampus_comes
ENSORLG00015002588	si:ch211-113e8.11	96	46.215	ENSIPUG00000002260	si:ch211-113e8.11	94	45.136	Ictalurus_punctatus
ENSORLG00015002588	si:ch211-113e8.11	100	57.028	ENSKMAG00000000086	si:ch211-113e8.11	99	56.627	Kryptolebias_marmoratus
ENSORLG00015002588	si:ch211-113e8.11	100	50.187	ENSLBEG00000008353	si:ch211-113e8.11	100	52.434	Labrus_bergylta
ENSORLG00015002588	si:ch211-113e8.11	74	41.530	ENSLACG00000004304	si:ch211-113e8.11	87	40.957	Latimeria_chalumnae
ENSORLG00015002588	si:ch211-113e8.11	72	62.963	ENSMAMG00000019098	si:ch211-113e8.11	80	62.376	Mastacembelus_armatus
ENSORLG00015002588	si:ch211-113e8.11	100	58.635	ENSMZEG00005023658	si:ch211-113e8.11	100	59.839	Maylandia_zebra
ENSORLG00015002588	si:ch211-113e8.11	100	49.597	ENSMMOG00000007254	si:ch211-113e8.11	100	51.004	Mola_mola
ENSORLG00015002588	si:ch211-113e8.11	100	54.962	ENSMALG00000005110	si:ch211-113e8.11	100	54.198	Monopterus_albus
ENSORLG00015002588	si:ch211-113e8.11	100	58.103	ENSNBRG00000015060	si:ch211-113e8.11	100	59.289	Neolamprologus_brichardi
ENSORLG00015002588	si:ch211-113e8.11	100	95.122	ENSORLG00000023699	si:ch211-113e8.11	100	95.122	Oryzias_latipes
ENSORLG00015002588	si:ch211-113e8.11	100	95.142	ENSORLG00020022094	si:ch211-113e8.11	100	95.142	Oryzias_latipes_hni
ENSORLG00015002588	si:ch211-113e8.11	100	81.377	ENSOMEG00000010624	si:ch211-113e8.11	100	81.377	Oryzias_melastigma
ENSORLG00015002588	si:ch211-113e8.11	55	52.899	ENSPKIG00000023576	si:ch211-113e8.11	96	44.262	Paramormyrops_kingsleyae
ENSORLG00015002588	si:ch211-113e8.11	96	53.165	ENSPMGG00000018547	si:ch211-113e8.11	97	54.661	Periophthalmus_magnuspinnatus
ENSORLG00015002588	si:ch211-113e8.11	98	55.691	ENSPFOG00000007950	si:ch211-113e8.11	100	56.098	Poecilia_formosa
ENSORLG00015002588	si:ch211-113e8.11	100	56.126	ENSPLAG00000002081	si:ch211-113e8.11	100	56.522	Poecilia_latipinna
ENSORLG00015002588	si:ch211-113e8.11	100	56.126	ENSPMEG00000017505	si:ch211-113e8.11	100	56.522	Poecilia_mexicana
ENSORLG00015002588	si:ch211-113e8.11	100	56.574	ENSPREG00000008530	si:ch211-113e8.11	100	57.371	Poecilia_reticulata
ENSORLG00015002588	si:ch211-113e8.11	100	57.708	ENSPNYG00000022856	si:ch211-113e8.11	100	58.893	Pundamilia_nyererei
ENSORLG00015002588	si:ch211-113e8.11	98	41.365	ENSPNAG00000013782	si:ch211-113e8.11	99	43.083	Pygocentrus_nattereri
ENSORLG00015002588	si:ch211-113e8.11	97	46.371	ENSSFOG00015000959	si:ch211-113e8.11	97	44.939	Scleropages_formosus
ENSORLG00015002588	si:ch211-113e8.11	100	59.144	ENSSMAG00000009732	si:ch211-113e8.11	100	60.078	Scophthalmus_maximus
ENSORLG00015002588	si:ch211-113e8.11	100	59.231	ENSSDUG00000000112	si:ch211-113e8.11	100	62.308	Seriola_dumerili
ENSORLG00015002588	si:ch211-113e8.11	100	57.634	ENSSLDG00000003287	si:ch211-113e8.11	100	61.538	Seriola_lalandi_dorsalis
ENSORLG00015002588	si:ch211-113e8.11	100	56.154	ENSSPAG00000001375	si:ch211-113e8.11	100	56.923	Stegastes_partitus
ENSORLG00015002588	si:ch211-113e8.11	99	52.610	ENSTRUG00000023898	si:ch211-113e8.11	99	52.610	Takifugu_rubripes
ENSORLG00015002588	si:ch211-113e8.11	100	56.522	ENSXMAG00000024104	si:ch211-113e8.11	100	56.917	Xiphophorus_maculatus