EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015002752 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like protein 5C
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4737 bases
Position: chr8:5478207-5482943
Accession: 101156976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002125	MMR_HSR1	PF01926.23	3.1e-08	1	1
ENSORLP00015002112	MMR_HSR1	PF01926.23	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015011521	-	3223	-	ENSORLP00015002112	179 (aa)	XP_004071314	UPI0002A493BC
ENSORLT00015011509	-	3356	-	ENSORLP00015002125	164 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015002752	arl5c	100	71.951	ENSORLG00015009927	arl8	98	70.286
ENSORLG00015002752	arl5c	91	43.046	ENSORLG00015002471	-	75	43.046
ENSORLG00015002752	arl5c	100	45.455	ENSORLG00015022780	-	98	45.198
ENSORLG00015002752	arl5c	98	36.747	ENSORLG00015014133	ARL6	96	36.517
ENSORLG00015002752	arl5c	100	40.606	ENSORLG00015002410	arl3	95	40.000
ENSORLG00015002752	arl5c	89	45.455	ENSORLG00015009897	arl4cb	86	43.713
ENSORLG00015002752	arl5c	98	37.725	ENSORLG00015004725	-	91	38.068
ENSORLG00015002752	arl5c	91	42.953	ENSORLG00015004028	-	94	42.953
ENSORLG00015002752	arl5c	95	31.410	ENSORLG00015018698	-	81	31.410
ENSORLG00015002752	arl5c	95	30.769	ENSORLG00015018436	arl8bb	82	30.769
ENSORLG00015002752	arl5c	100	39.645	ENSORLG00015014176	arl14	89	39.412
ENSORLG00015002752	arl5c	89	41.830	ENSORLG00015014008	-	81	42.208
ENSORLG00015002752	arl5c	89	42.105	ENSORLG00015017167	arl4aa	85	41.212
ENSORLG00015002752	arl5c	95	47.097	ENSORLG00015015557	arf2b	92	46.707
ENSORLG00015002752	arl5c	100	71.341	ENSORLG00015020012	arl5a	99	69.101
ENSORLG00015002752	arl5c	73	30.645	ENSORLG00015019569	rab25b	57	30.081
ENSORLG00015002752	arl5c	100	40.606	ENSORLG00015007242	-	95	39.306
ENSORLG00015002752	arl5c	100	45.455	ENSORLG00015001409	arf3b	98	45.198
ENSORLG00015002752	arl5c	94	38.554	ENSORLG00015022049	arfrp1	89	38.122
ENSORLG00015002752	arl5c	91	42.667	ENSORLG00015010044	arl2	86	42.767
ENSORLG00015002752	arl5c	90	37.838	ENSORLG00015010864	arl11	91	37.931
ENSORLG00015002752	arl5c	100	46.341	ENSORLG00015007752	arf1	98	46.023
ENSORLG00015002752	arl5c	100	45.732	ENSORLG00015019836	-	98	45.455
ENSORLG00015002752	arl5c	70	34.211	ENSORLG00015010542	sar1ab	58	34.211
ENSORLG00015002752	arl5c	92	38.411	ENSORLG00015022526	arl3l2	88	36.585
ENSORLG00015002752	arl5c	99	44.172	ENSORLG00015002736	arl1	95	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002752	arl5c	100	85.366	ENSAPOG00000005821	arl5c	100	84.358	Acanthochromis_polyacanthus
ENSORLG00015002752	arl5c	92	85.366	ENSACIG00000008975	arl5c	91	85.366	Amphilophus_citrinellus
ENSORLG00015002752	arl5c	100	87.805	ENSAOCG00000010448	arl5c	100	86.592	Amphiprion_ocellaris
ENSORLG00015002752	arl5c	100	87.805	ENSAPEG00000002699	arl5c	100	86.592	Amphiprion_percula
ENSORLG00015002752	arl5c	100	83.240	ENSATEG00000000181	arl5c	100	83.240	Anabas_testudineus
ENSORLG00015002752	arl5c	100	84.756	ENSACLG00000000922	arl5c	100	84.756	Astatotilapia_calliptera
ENSORLG00015002752	arl5c	100	78.659	ENSAMXG00000031771	arl5c	100	77.654	Astyanax_mexicanus
ENSORLG00015002752	arl5c	100	84.146	ENSCSEG00000009845	arl5c	100	82.682	Cynoglossus_semilaevis
ENSORLG00015002752	arl5c	100	87.195	ENSCVAG00000012706	arl5c	99	86.441	Cyprinodon_variegatus
ENSORLG00015002752	arl5c	100	77.439	ENSDARG00000035719	arl5c	100	77.095	Danio_rerio
ENSORLG00015002752	arl5c	100	82.927	ENSELUG00000016864	arl5c	100	81.006	Esox_lucius
ENSORLG00015002752	arl5c	100	89.024	ENSFHEG00000013677	arl5c	100	88.268	Fundulus_heteroclitus
ENSORLG00015002752	arl5c	100	85.976	ENSGAFG00000002547	arl5c	100	84.916	Gambusia_affinis
ENSORLG00015002752	arl5c	100	87.805	ENSGACG00000009321	arl5c	98	86.932	Gasterosteus_aculeatus
ENSORLG00015002752	arl5c	100	84.756	ENSHBUG00000007301	arl5c	100	84.358	Haplochromis_burtoni
ENSORLG00015002752	arl5c	100	81.098	ENSHCOG00000017576	-	100	79.888	Hippocampus_comes
ENSORLG00015002752	arl5c	100	78.049	ENSIPUG00000023232	arl5c	100	77.095	Ictalurus_punctatus
ENSORLG00015002752	arl5c	100	87.195	ENSKMAG00000011323	arl5c	100	86.592	Kryptolebias_marmoratus
ENSORLG00015002752	arl5c	100	85.976	ENSLBEG00000006177	arl5c	86	85.475	Labrus_bergylta
ENSORLG00015002752	arl5c	100	86.585	ENSMAMG00000022157	arl5c	100	84.916	Mastacembelus_armatus
ENSORLG00015002752	arl5c	100	84.756	ENSMZEG00005022925	arl5c	100	84.358	Maylandia_zebra
ENSORLG00015002752	arl5c	91	85.906	ENSMMOG00000020851	arl5c	96	84.756	Mola_mola
ENSORLG00015002752	arl5c	92	85.366	ENSMALG00000009306	arl5c	93	85.366	Monopterus_albus
ENSORLG00015002752	arl5c	100	85.366	ENSNBRG00000020245	arl5c	100	85.366	Neolamprologus_brichardi
ENSORLG00015002752	arl5c	100	84.146	ENSONIG00000000890	arl5c	99	83.799	Oreochromis_niloticus
ENSORLG00015002752	arl5c	100	100.000	ENSORLG00000002960	arl5c	100	100.000	Oryzias_latipes
ENSORLG00015002752	arl5c	100	100.000	ENSORLG00020010074	arl5c	100	100.000	Oryzias_latipes_hni
ENSORLG00015002752	arl5c	97	95.954	ENSOMEG00000021718	arl5c	98	95.954	Oryzias_melastigma
ENSORLG00015002752	arl5c	100	81.098	ENSPKIG00000021727	arl5c	100	79.330	Paramormyrops_kingsleyae
ENSORLG00015002752	arl5c	100	86.585	ENSPFOG00000007842	arl5c	99	86.034	Poecilia_formosa
ENSORLG00015002752	arl5c	100	86.585	ENSPLAG00000002394	arl5c	100	86.034	Poecilia_latipinna
ENSORLG00015002752	arl5c	91	86.503	ENSPMEG00000000631	arl5c	94	86.503	Poecilia_mexicana
ENSORLG00015002752	arl5c	100	87.195	ENSPREG00000008730	arl5c	100	86.592	Poecilia_reticulata
ENSORLG00015002752	arl5c	100	84.756	ENSPNYG00000012720	arl5c	100	84.756	Pundamilia_nyererei
ENSORLG00015002752	arl5c	100	78.049	ENSPNAG00000002310	arl5c	100	77.095	Pygocentrus_nattereri
ENSORLG00015002752	arl5c	100	79.878	ENSSFOG00015023529	arl5c	100	78.212	Scleropages_formosus
ENSORLG00015002752	arl5c	100	86.585	ENSSMAG00000010552	arl5c	100	85.475	Scophthalmus_maximus
ENSORLG00015002752	arl5c	100	84.146	ENSSDUG00000022640	arl5c	100	83.240	Seriola_dumerili
ENSORLG00015002752	arl5c	100	84.146	ENSSLDG00000000728	arl5c	100	83.240	Seriola_lalandi_dorsalis
ENSORLG00015002752	arl5c	100	85.976	ENSSPAG00000007687	arl5c	100	85.475	Stegastes_partitus
ENSORLG00015002752	arl5c	100	84.146	ENSTRUG00000022814	arl5c	100	83.799	Takifugu_rubripes
ENSORLG00015002752	arl5c	100	83.537	ENSTNIG00000003015	arl5c	99	83.240	Tetraodon_nigroviridis
ENSORLG00015002752	arl5c	100	86.585	ENSXCOG00000017380	arl5c	99	86.441	Xiphophorus_couchianus
ENSORLG00015002752	arl5c	100	85.976	ENSXMAG00000008447	arl5c	99	85.876	Xiphophorus_maculatus