EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015002854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 11507 bases
Position: chr5:3030260-3041766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002208	RRM_1	PF00076.22	1.6e-13	1	1
ENSORLP00015002208	G-patch	PF01585.23	2.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015011357	-	3892	-	ENSORLP00015002208	798 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015002854	-	89	39.464	ENSORLG00015021021	rbm10	76	39.947
ENSORLG00015002854	-	98	56.865	ENSORLG00015018379	rbm5	96	57.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002854	-	98	54.534	ENSG00000003756	RBM5	95	54.895	Homo_sapiens
ENSORLG00015002854	-	98	56.763	ENSAPOG00000016625	rbm5	96	57.762	Acanthochromis_polyacanthus
ENSORLG00015002854	-	98	71.004	ENSAPOG00000006011	-	96	71.252	Acanthochromis_polyacanthus
ENSORLG00015002854	-	98	53.951	ENSAMEG00000012005	RBM5	95	54.310	Ailuropoda_melanoleuca
ENSORLG00015002854	-	60	64.085	ENSACIG00000007571	rbm5	91	61.696	Amphilophus_citrinellus
ENSORLG00015002854	-	98	65.829	ENSACIG00000021310	-	95	66.080	Amphilophus_citrinellus
ENSORLG00015002854	-	98	65.355	ENSAOCG00000017312	-	95	65.482	Amphiprion_ocellaris
ENSORLG00015002854	-	98	56.815	ENSAOCG00000002880	rbm5	96	57.914	Amphiprion_ocellaris
ENSORLG00015002854	-	90	57.047	ENSAPEG00000011862	rbm5	89	58.121	Amphiprion_percula
ENSORLG00015002854	-	98	70.632	ENSAPEG00000018222	RBM5	96	70.756	Amphiprion_percula
ENSORLG00015002854	-	98	69.297	ENSATEG00000003838	-	96	69.667	Anabas_testudineus
ENSORLG00015002854	-	99	56.475	ENSATEG00000024663	rbm5	96	57.264	Anabas_testudineus
ENSORLG00015002854	-	92	55.482	ENSAPLG00000011176	RBM5	95	55.381	Anas_platyrhynchos
ENSORLG00015002854	-	98	50.847	ENSACAG00000008580	RBM5	96	52.727	Anolis_carolinensis
ENSORLG00015002854	-	99	54.345	ENSANAG00000025199	RBM5	95	54.647	Aotus_nancymaae
ENSORLG00015002854	-	98	56.851	ENSACLG00000012748	rbm5	96	57.332	Astatotilapia_calliptera
ENSORLG00015002854	-	98	68.480	ENSACLG00000024198	RBM5	96	68.480	Astatotilapia_calliptera
ENSORLG00015002854	-	84	59.227	ENSAMXG00000008146	rbm5	95	61.383	Astyanax_mexicanus
ENSORLG00015002854	-	98	54.074	ENSBTAG00000006330	RBM5	95	54.433	Bos_taurus
ENSORLG00015002854	-	98	54.353	ENSCJAG00000004740	RBM5	95	54.715	Callithrix_jacchus
ENSORLG00015002854	-	98	53.827	ENSCAFG00000010866	RBM5	95	54.187	Canis_familiaris
ENSORLG00015002854	-	98	53.827	ENSCAFG00020022126	RBM5	95	54.187	Canis_lupus_dingo
ENSORLG00015002854	-	98	54.534	ENSCHIG00000018435	RBM5	95	54.895	Capra_hircus
ENSORLG00015002854	-	88	53.259	ENSTSYG00000004158	RBM5	100	53.665	Carlito_syrichta
ENSORLG00015002854	-	98	42.289	ENSCAPG00000013495	RBM5	95	43.494	Cavia_aperea
ENSORLG00015002854	-	98	54.151	ENSCPOG00000008151	RBM5	95	54.444	Cavia_porcellus
ENSORLG00015002854	-	98	54.064	ENSCCAG00000026401	RBM5	95	54.568	Cebus_capucinus
ENSORLG00015002854	-	98	54.534	ENSCATG00000041038	RBM5	95	54.895	Cercocebus_atys
ENSORLG00015002854	-	98	54.275	ENSCLAG00000007873	RBM5	95	54.931	Chinchilla_lanigera
ENSORLG00015002854	-	98	54.534	ENSCSAG00000014401	RBM5	95	54.895	Chlorocebus_sabaeus
ENSORLG00015002854	-	85	51.234	ENSCHOG00000009429	RBM5	85	51.749	Choloepus_hoffmanni
ENSORLG00015002854	-	91	53.928	ENSCPBG00000002406	RBM5	96	53.155	Chrysemys_picta_bellii
ENSORLG00015002854	-	98	53.798	ENSCANG00000031250	RBM5	95	54.161	Colobus_angolensis_palliatus
ENSORLG00015002854	-	98	54.250	ENSCGRG00001010543	Rbm5	95	54.795	Cricetulus_griseus_chok1gshd
ENSORLG00015002854	-	98	54.250	ENSCGRG00000008475	Rbm5	95	54.795	Cricetulus_griseus_crigri
ENSORLG00015002854	-	98	56.109	ENSCSEG00000000596	rbm5	94	56.766	Cynoglossus_semilaevis
ENSORLG00015002854	-	98	55.742	ENSCVAG00000005655	rbm5	96	57.419	Cyprinodon_variegatus
ENSORLG00015002854	-	98	49.523	ENSDARG00000098280	rbm5	100	55.629	Danio_rerio
ENSORLG00015002854	-	98	53.827	ENSDNOG00000011756	RBM5	95	54.064	Dasypus_novemcinctus
ENSORLG00015002854	-	98	54.037	ENSDORG00000007692	Rbm5	95	54.635	Dipodomys_ordii
ENSORLG00015002854	-	91	52.830	ENSETEG00000012773	RBM5	88	52.400	Echinops_telfairi
ENSORLG00015002854	-	74	52.907	ENSEBUG00000017034	rbm5	89	41.423	Eptatretus_burgeri
ENSORLG00015002854	-	98	54.410	ENSEASG00005011835	RBM5	95	54.771	Equus_asinus_asinus
ENSORLG00015002854	-	98	54.410	ENSECAG00000020447	RBM5	95	54.771	Equus_caballus
ENSORLG00015002854	-	76	70.886	ENSEEUG00000005943	RBM5	81	70.886	Erinaceus_europaeus
ENSORLG00015002854	-	98	57.844	ENSELUG00000022467	rbm5	96	57.826	Esox_lucius
ENSORLG00015002854	-	98	54.410	ENSFCAG00000014639	RBM5	95	54.512	Felis_catus
ENSORLG00015002854	-	92	56.048	ENSFALG00000008828	RBM5	83	54.088	Ficedula_albicollis
ENSORLG00015002854	-	98	54.218	ENSFDAG00000001897	RBM5	95	54.591	Fukomys_damarensis
ENSORLG00015002854	-	98	55.918	ENSFHEG00000015954	rbm5	96	57.264	Fundulus_heteroclitus
ENSORLG00015002854	-	98	50.375	ENSGMOG00000007810	-	95	50.375	Gadus_morhua
ENSORLG00015002854	-	98	55.528	ENSGMOG00000016224	rbm5	95	55.528	Gadus_morhua
ENSORLG00015002854	-	92	55.777	ENSGALG00000039288	RBM5	79	55.236	Gallus_gallus
ENSORLG00015002854	-	98	55.503	ENSGAFG00000010690	rbm5	96	56.584	Gambusia_affinis
ENSORLG00015002854	-	98	64.242	ENSGACG00000000858	-	96	64.242	Gasterosteus_aculeatus
ENSORLG00015002854	-	98	56.489	ENSGACG00000010469	rbm5	96	57.231	Gasterosteus_aculeatus
ENSORLG00015002854	-	98	51.566	ENSGAGG00000007935	RBM5	99	53.406	Gopherus_agassizii
ENSORLG00015002854	-	98	54.534	ENSGGOG00000014490	RBM5	95	54.895	Gorilla_gorilla
ENSORLG00015002854	-	98	56.851	ENSHBUG00000001941	rbm5	96	57.554	Haplochromis_burtoni
ENSORLG00015002854	-	98	68.850	ENSHBUG00000011901	-	96	68.850	Haplochromis_burtoni
ENSORLG00015002854	-	98	53.752	ENSHGLG00000014844	RBM5	95	54.289	Heterocephalus_glaber_female
ENSORLG00015002854	-	98	54.151	ENSHGLG00100010739	RBM5	95	54.691	Heterocephalus_glaber_male
ENSORLG00015002854	-	98	55.231	ENSHCOG00000017110	rbm5	99	55.301	Hippocampus_comes
ENSORLG00015002854	-	98	60.000	ENSHCOG00000004536	-	90	61.111	Hippocampus_comes
ENSORLG00015002854	-	98	57.528	ENSIPUG00000000640	rbm5	96	58.100	Ictalurus_punctatus
ENSORLG00015002854	-	98	54.161	ENSSTOG00000013856	RBM5	95	54.806	Ictidomys_tridecemlineatus
ENSORLG00015002854	-	98	54.342	ENSJJAG00000008844	Rbm5	95	54.771	Jaculus_jaculus
ENSORLG00015002854	-	98	56.899	ENSKMAG00000006663	rbm5	96	58.486	Kryptolebias_marmoratus
ENSORLG00015002854	-	98	65.629	ENSLBEG00000010877	-	90	65.629	Labrus_bergylta
ENSORLG00015002854	-	55	64.444	ENSLBEG00000002522	-	91	50.000	Labrus_bergylta
ENSORLG00015002854	-	98	55.875	ENSLBEG00000020858	rbm5	96	57.419	Labrus_bergylta
ENSORLG00015002854	-	98	53.998	ENSLACG00000016572	RBM5	95	56.328	Latimeria_chalumnae
ENSORLG00015002854	-	98	56.905	ENSLOCG00000010774	rbm5	96	57.262	Lepisosteus_oculatus
ENSORLG00015002854	-	98	54.218	ENSLAFG00000006733	RBM5	95	54.715	Loxodonta_africana
ENSORLG00015002854	-	98	54.534	ENSMFAG00000031609	RBM5	95	54.895	Macaca_fascicularis
ENSORLG00015002854	-	92	56.091	ENSMMUG00000004921	RBM5	94	54.931	Macaca_mulatta
ENSORLG00015002854	-	98	54.534	ENSMNEG00000044394	RBM5	95	54.895	Macaca_nemestrina
ENSORLG00015002854	-	98	53.607	ENSMLEG00000034689	RBM5	95	53.656	Mandrillus_leucophaeus
ENSORLG00015002854	-	98	69.496	ENSMAMG00000023948	-	95	63.750	Mastacembelus_armatus
ENSORLG00015002854	-	98	58.545	ENSMAMG00000017277	rbm5	96	58.667	Mastacembelus_armatus
ENSORLG00015002854	-	98	68.232	ENSMZEG00005010035	-	96	68.232	Maylandia_zebra
ENSORLG00015002854	-	98	56.851	ENSMZEG00005015328	rbm5	96	57.332	Maylandia_zebra
ENSORLG00015002854	-	92	55.393	ENSMGAG00000003972	RBM5	95	55.159	Meleagris_gallopavo
ENSORLG00015002854	-	92	55.823	ENSMAUG00000020572	Rbm5	93	54.988	Mesocricetus_auratus
ENSORLG00015002854	-	98	54.410	ENSMICG00000016179	RBM5	95	54.771	Microcebus_murinus
ENSORLG00015002854	-	98	54.286	ENSMOCG00000017479	Rbm5	95	55.019	Microtus_ochrogaster
ENSORLG00015002854	-	98	52.297	ENSMMOG00000015342	rbm5	96	52.613	Mola_mola
ENSORLG00015002854	-	89	63.127	ENSMMOG00000021804	-	95	56.361	Mola_mola
ENSORLG00015002854	-	98	54.229	ENSMODG00000012301	RBM5	95	54.759	Monodelphis_domestica
ENSORLG00015002854	-	98	51.288	ENSMALG00000000609	rbm5	95	52.399	Monopterus_albus
ENSORLG00015002854	-	98	68.936	ENSMALG00000016769	-	96	68.936	Monopterus_albus
ENSORLG00015002854	-	98	53.779	MGP_CAROLIEiJ_G0032660	Rbm5	90	73.188	Mus_caroli
ENSORLG00015002854	-	98	53.779	ENSMUSG00000032580	Rbm5	89	73.188	Mus_musculus
ENSORLG00015002854	-	98	53.903	MGP_PahariEiJ_G0015528	Rbm5	90	73.188	Mus_pahari
ENSORLG00015002854	-	98	53.779	MGP_SPRETEiJ_G0033805	Rbm5	98	68.874	Mus_spretus
ENSORLG00015002854	-	98	54.501	ENSMLUG00000007875	RBM5	95	54.310	Myotis_lucifugus
ENSORLG00015002854	-	98	53.818	ENSNGAG00000011777	Rbm5	95	54.388	Nannospalax_galili
ENSORLG00015002854	-	98	56.731	ENSNBRG00000018097	rbm5	96	57.212	Neolamprologus_brichardi
ENSORLG00015002854	-	96	62.295	ENSNBRG00000004400	RBM5	95	62.421	Neolamprologus_brichardi
ENSORLG00015002854	-	98	54.534	ENSNLEG00000006943	RBM5	95	54.895	Nomascus_leucogenys
ENSORLG00015002854	-	83	60.194	ENSMEUG00000012994	RBM5	87	55.556	Notamacropus_eugenii
ENSORLG00015002854	-	91	54.054	ENSOPRG00000015154	RBM5	88	54.021	Ochotona_princeps
ENSORLG00015002854	-	98	51.617	ENSODEG00000019111	-	95	52.736	Octodon_degus
ENSORLG00015002854	-	98	54.275	ENSODEG00000016254	-	95	54.815	Octodon_degus
ENSORLG00015002854	-	98	69.667	ENSONIG00000019007	RBM5	96	69.667	Oreochromis_niloticus
ENSORLG00015002854	-	98	56.318	ENSONIG00000004107	rbm5	96	56.799	Oreochromis_niloticus
ENSORLG00015002854	-	87	55.745	ENSOANG00000006557	RBM5	95	55.837	Ornithorhynchus_anatinus
ENSORLG00015002854	-	98	54.084	ENSOCUG00000011652	RBM5	95	54.399	Oryctolagus_cuniculus
ENSORLG00015002854	-	98	96.815	ENSORLG00000001053	-	95	96.815	Oryzias_latipes
ENSORLG00015002854	-	98	56.659	ENSORLG00000003369	rbm5	99	58.108	Oryzias_latipes
ENSORLG00015002854	-	98	56.212	ENSORLG00020021744	rbm5	96	57.369	Oryzias_latipes_hni
ENSORLG00015002854	-	100	97.870	ENSORLG00020006782	-	100	97.870	Oryzias_latipes_hni
ENSORLG00015002854	-	98	55.185	ENSOMEG00000002219	rbm5	96	56.747	Oryzias_melastigma
ENSORLG00015002854	-	80	67.134	ENSOMEG00000010653	-	91	67.601	Oryzias_melastigma
ENSORLG00015002854	-	92	53.887	ENSOGAG00000004205	RBM5	95	53.681	Otolemur_garnettii
ENSORLG00015002854	-	98	54.534	ENSOARG00000010923	RBM5	95	54.895	Ovis_aries
ENSORLG00015002854	-	98	54.534	ENSPPAG00000043010	RBM5	95	54.895	Pan_paniscus
ENSORLG00015002854	-	98	54.410	ENSPPRG00000005404	RBM5	95	54.512	Panthera_pardus
ENSORLG00015002854	-	98	54.410	ENSPTIG00000000962	RBM5	95	54.512	Panthera_tigris_altaica
ENSORLG00015002854	-	98	54.534	ENSPTRG00000014946	RBM5	95	54.895	Pan_troglodytes
ENSORLG00015002854	-	98	54.534	ENSPANG00000018507	RBM5	95	54.895	Papio_anubis
ENSORLG00015002854	-	76	48.226	ENSPKIG00000019187	-	94	48.548	Paramormyrops_kingsleyae
ENSORLG00015002854	-	98	56.182	ENSPKIG00000024837	RBM5	96	56.475	Paramormyrops_kingsleyae
ENSORLG00015002854	-	87	54.965	ENSPSIG00000016073	RBM5	95	55.804	Pelodiscus_sinensis
ENSORLG00015002854	-	78	47.778	ENSPMGG00000017347	rbm5	94	49.209	Periophthalmus_magnuspinnatus
ENSORLG00015002854	-	85	69.048	ENSPMGG00000004719	-	93	69.048	Periophthalmus_magnuspinnatus
ENSORLG00015002854	-	98	39.621	ENSPMAG00000001998	rbm5	95	40.045	Petromyzon_marinus
ENSORLG00015002854	-	98	54.104	ENSPCIG00000021531	RBM5	95	54.512	Phascolarctos_cinereus
ENSORLG00015002854	-	98	55.344	ENSPLAG00000006318	rbm5	96	56.280	Poecilia_latipinna
ENSORLG00015002854	-	73	55.051	ENSPMEG00000008651	rbm5	94	56.616	Poecilia_mexicana
ENSORLG00015002854	-	98	55.542	ENSPMEG00000004295	rbm5	96	56.718	Poecilia_mexicana
ENSORLG00015002854	-	98	54.824	ENSPREG00000003795	rbm5	96	56.346	Poecilia_reticulata
ENSORLG00015002854	-	58	57.522	ENSPCAG00000005459	RBM5	72	57.727	Procavia_capensis
ENSORLG00015002854	-	98	54.410	ENSPCOG00000025840	RBM5	95	54.512	Propithecus_coquereli
ENSORLG00015002854	-	98	52.547	ENSPVAG00000006812	RBM5	95	52.912	Pteropus_vampyrus
ENSORLG00015002854	-	98	56.971	ENSPNYG00000014787	rbm5	96	57.674	Pundamilia_nyererei
ENSORLG00015002854	-	83	69.527	ENSPNYG00000006361	RBM5	94	69.527	Pundamilia_nyererei
ENSORLG00015002854	-	98	56.311	ENSPNAG00000012070	rbm5	96	56.953	Pygocentrus_nattereri
ENSORLG00015002854	-	98	54.332	ENSRNOG00000018153	Rbm5	95	54.827	Rattus_norvegicus
ENSORLG00015002854	-	98	54.286	ENSRBIG00000012679	RBM5	95	54.647	Rhinopithecus_bieti
ENSORLG00015002854	-	98	54.286	ENSRROG00000041331	RBM5	95	54.988	Rhinopithecus_roxellana
ENSORLG00015002854	-	98	54.410	ENSSBOG00000006324	RBM5	95	54.771	Saimiri_boliviensis_boliviensis
ENSORLG00015002854	-	98	54.115	ENSSHAG00000018260	RBM5	95	54.523	Sarcophilus_harrisii
ENSORLG00015002854	-	98	57.126	ENSSFOG00015019645	-	96	59.486	Scleropages_formosus
ENSORLG00015002854	-	98	57.485	ENSSFOG00015019052	rbm5	90	59.223	Scleropages_formosus
ENSORLG00015002854	-	98	56.395	ENSSMAG00000017106	rbm5	96	56.882	Scophthalmus_maximus
ENSORLG00015002854	-	98	57.246	ENSSDUG00000019775	rbm5	96	56.919	Seriola_dumerili
ENSORLG00015002854	-	98	57.609	ENSSLDG00000002329	rbm5	96	57.367	Seriola_lalandi_dorsalis
ENSORLG00015002854	-	98	68.681	ENSSLDG00000015996	-	96	69.174	Seriola_lalandi_dorsalis
ENSORLG00015002854	-	96	53.526	ENSSPUG00000001876	RBM5	85	53.526	Sphenodon_punctatus
ENSORLG00015002854	-	98	70.880	ENSSPAG00000020011	-	96	70.880	Stegastes_partitus
ENSORLG00015002854	-	98	56.257	ENSSPAG00000019638	rbm5	96	57.434	Stegastes_partitus
ENSORLG00015002854	-	98	54.534	ENSSSCG00000011395	RBM5	95	54.895	Sus_scrofa
ENSORLG00015002854	-	92	50.529	ENSTGUG00000006417	RBM5	94	51.910	Taeniopygia_guttata
ENSORLG00015002854	-	98	57.869	ENSTRUG00000008292	rbm5	96	57.869	Takifugu_rubripes
ENSORLG00015002854	-	79	57.200	ENSTNIG00000014742	rbm5	84	57.200	Tetraodon_nigroviridis
ENSORLG00015002854	-	98	47.842	ENSTBEG00000005424	RBM5	95	48.030	Tupaia_belangeri
ENSORLG00015002854	-	94	51.948	ENSTTRG00000007717	RBM5	92	52.202	Tursiops_truncatus
ENSORLG00015002854	-	98	53.951	ENSUAMG00000028347	RBM5	95	54.310	Ursus_americanus
ENSORLG00015002854	-	98	53.951	ENSUMAG00000022027	RBM5	95	54.310	Ursus_maritimus
ENSORLG00015002854	-	93	53.026	ENSVPAG00000009388	RBM5	100	52.934	Vicugna_pacos
ENSORLG00015002854	-	83	70.253	ENSVVUG00000028647	RBM5	95	54.187	Vulpes_vulpes
ENSORLG00015002854	-	98	55.582	ENSXMAG00000016369	rbm5	96	56.872	Xiphophorus_maculatus