EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015002907 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 11855 bases
Position: chr4:5840900-5852754
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002244	ResIII	PF04851.15	4.8e-08	1	1
ENSORLP00015002244	DEAD	PF00270.29	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015011335	-	1458	-	ENSORLP00015002220	485 (aa)	-	-
ENSORLT00015011293	-	3500	-	ENSORLP00015002244	734 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015002907	rad54l	73	30.678	ENSORLG00015010250	ercc6l2	53	30.678
ENSORLG00015002907	rad54l	64	37.063	ENSORLG00015017166	hltf	62	38.194
ENSORLG00015002907	rad54l	68	32.072	ENSORLG00015001680	chd1l	52	32.072
ENSORLG00015002907	rad54l	88	44.818	ENSORLG00015018536	rad54b	71	44.818
ENSORLG00015002907	rad54l	81	36.715	ENSORLG00015010960	hells	62	36.715

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002907	rad54l	99	78.523	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSORLG00015002907	rad54l	99	84.783	ENSAPOG00000011643	rad54l	99	84.239	Acanthochromis_polyacanthus
ENSORLG00015002907	rad54l	99	77.151	ENSAMEG00000013902	RAD54L	99	77.285	Ailuropoda_melanoleuca
ENSORLG00015002907	rad54l	99	83.989	ENSACIG00000001939	rad54l	99	83.967	Amphilophus_citrinellus
ENSORLG00015002907	rad54l	99	87.772	ENSAOCG00000017576	rad54l	99	87.228	Amphiprion_ocellaris
ENSORLG00015002907	rad54l	96	88.152	ENSAPEG00000020658	rad54l	95	89.650	Amphiprion_percula
ENSORLG00015002907	rad54l	95	88.588	ENSATEG00000006767	rad54l	98	89.275	Anabas_testudineus
ENSORLG00015002907	rad54l	94	82.395	ENSAPLG00000006389	RAD54L	98	82.413	Anas_platyrhynchos
ENSORLG00015002907	rad54l	99	80.458	ENSACAG00000002312	RAD54L	99	80.458	Anolis_carolinensis
ENSORLG00015002907	rad54l	99	78.792	ENSANAG00000035439	RAD54L	99	78.523	Aotus_nancymaae
ENSORLG00015002907	rad54l	100	82.432	ENSACLG00000018711	rad54l	100	82.297	Astatotilapia_calliptera
ENSORLG00015002907	rad54l	100	85.040	ENSAMXG00000012777	rad54l	100	84.906	Astyanax_mexicanus
ENSORLG00015002907	rad54l	99	78.284	ENSBTAG00000019901	RAD54L	99	77.614	Bos_taurus
ENSORLG00015002907	rad54l	96	57.024	WBGene00004298	rad-54	83	58.419	Caenorhabditis_elegans
ENSORLG00015002907	rad54l	99	76.471	ENSCJAG00000021080	RAD54L	95	76.471	Callithrix_jacchus
ENSORLG00015002907	rad54l	99	77.181	ENSCAFG00000004272	RAD54L	99	77.315	Canis_familiaris
ENSORLG00015002907	rad54l	99	77.151	ENSCAFG00020015066	RAD54L	99	77.285	Canis_lupus_dingo
ENSORLG00015002907	rad54l	99	78.523	ENSCHIG00000020118	RAD54L	99	77.584	Capra_hircus
ENSORLG00015002907	rad54l	99	77.748	ENSTSYG00000002032	RAD54L	99	77.346	Carlito_syrichta
ENSORLG00015002907	rad54l	99	78.658	ENSCPOG00000006768	RAD54L	99	78.255	Cavia_porcellus
ENSORLG00015002907	rad54l	99	78.792	ENSCCAG00000025783	RAD54L	99	78.523	Cebus_capucinus
ENSORLG00015002907	rad54l	99	79.060	ENSCATG00000030589	RAD54L	99	78.658	Cercocebus_atys
ENSORLG00015002907	rad54l	99	79.195	ENSCLAG00000004645	RAD54L	99	78.926	Chinchilla_lanigera
ENSORLG00015002907	rad54l	99	78.926	ENSCSAG00000001229	RAD54L	99	78.658	Chlorocebus_sabaeus
ENSORLG00015002907	rad54l	99	80.323	ENSCPBG00000005675	RAD54L	99	80.054	Chrysemys_picta_bellii
ENSORLG00015002907	rad54l	99	62.663	ENSCING00000024456	-	99	62.205	Ciona_intestinalis
ENSORLG00015002907	rad54l	99	62.730	ENSCSAVG00000010859	-	99	62.779	Ciona_savignyi
ENSORLG00015002907	rad54l	99	78.926	ENSCANG00000034891	RAD54L	99	78.658	Colobus_angolensis_palliatus
ENSORLG00015002907	rad54l	99	78.571	ENSCGRG00001014807	Rad54l	99	78.167	Cricetulus_griseus_chok1gshd
ENSORLG00015002907	rad54l	99	78.571	ENSCGRG00000016038	Rad54l	99	78.167	Cricetulus_griseus_crigri
ENSORLG00015002907	rad54l	99	85.014	ENSCSEG00000001983	rad54l	99	84.741	Cynoglossus_semilaevis
ENSORLG00015002907	rad54l	88	87.649	ENSCVAG00000019561	rad54l	100	87.649	Cyprinodon_variegatus
ENSORLG00015002907	rad54l	100	83.062	ENSDARG00000018623	rad54l	100	81.978	Danio_rerio
ENSORLG00015002907	rad54l	99	77.882	ENSDNOG00000003395	RAD54L	99	76.810	Dasypus_novemcinctus
ENSORLG00015002907	rad54l	99	72.090	ENSDORG00000002632	Rad54l	99	72.267	Dipodomys_ordii
ENSORLG00015002907	rad54l	99	54.400	FBgn0002989	okr	87	56.828	Drosophila_melanogaster
ENSORLG00015002907	rad54l	77	75.328	ENSETEG00000000550	RAD54L	78	77.049	Echinops_telfairi
ENSORLG00015002907	rad54l	99	78.003	ENSEASG00005004511	RAD54L	96	81.315	Equus_asinus_asinus
ENSORLG00015002907	rad54l	99	77.852	ENSECAG00000008760	RAD54L	99	77.987	Equus_caballus
ENSORLG00015002907	rad54l	99	75.973	ENSEEUG00000008113	RAD54L	99	75.973	Erinaceus_europaeus
ENSORLG00015002907	rad54l	100	85.542	ENSELUG00000002295	rad54l	100	85.007	Esox_lucius
ENSORLG00015002907	rad54l	99	76.644	ENSFCAG00000003444	RAD54L	99	76.913	Felis_catus
ENSORLG00015002907	rad54l	99	79.515	ENSFALG00000009480	RAD54L	99	79.245	Ficedula_albicollis
ENSORLG00015002907	rad54l	99	77.987	ENSFDAG00000007806	RAD54L	99	77.315	Fukomys_damarensis
ENSORLG00015002907	rad54l	61	84.116	ENSFHEG00000009824	rad54l	76	84.163	Fundulus_heteroclitus
ENSORLG00015002907	rad54l	99	83.220	ENSGMOG00000014568	rad54l	99	83.220	Gadus_morhua
ENSORLG00015002907	rad54l	99	80.432	ENSGALG00000010356	RAD54L	92	79.892	Gallus_gallus
ENSORLG00015002907	rad54l	91	83.210	ENSGAFG00000011110	rad54l	100	83.210	Gambusia_affinis
ENSORLG00015002907	rad54l	100	85.695	ENSGACG00000003111	rad54l	98	85.155	Gasterosteus_aculeatus
ENSORLG00015002907	rad54l	99	79.487	ENSGAGG00000014089	RAD54L	96	79.217	Gopherus_agassizii
ENSORLG00015002907	rad54l	99	78.658	ENSGGOG00000010602	RAD54L	99	78.389	Gorilla_gorilla
ENSORLG00015002907	rad54l	100	82.703	ENSHBUG00000007793	rad54l	100	82.568	Haplochromis_burtoni
ENSORLG00015002907	rad54l	99	78.926	ENSHGLG00000000753	RAD54L	99	78.658	Heterocephalus_glaber_female
ENSORLG00015002907	rad54l	99	78.658	ENSHGLG00100016987	RAD54L	99	78.658	Heterocephalus_glaber_male
ENSORLG00015002907	rad54l	100	82.574	ENSIPUG00000015999	rad54l	99	86.087	Ictalurus_punctatus
ENSORLG00015002907	rad54l	99	77.852	ENSSTOG00000029125	RAD54L	99	77.852	Ictidomys_tridecemlineatus
ENSORLG00015002907	rad54l	99	65.591	ENSJJAG00000000235	-	99	65.188	Jaculus_jaculus
ENSORLG00015002907	rad54l	99	85.054	ENSKMAG00000009944	rad54l	99	85.054	Kryptolebias_marmoratus
ENSORLG00015002907	rad54l	99	86.992	ENSLBEG00000014617	rad54l	97	89.732	Labrus_bergylta
ENSORLG00015002907	rad54l	99	83.536	ENSLOCG00000004144	rad54l	100	83.210	Lepisosteus_oculatus
ENSORLG00015002907	rad54l	99	77.957	ENSLAFG00000007583	RAD54L	99	78.091	Loxodonta_africana
ENSORLG00015002907	rad54l	99	79.060	ENSMFAG00000031241	RAD54L	99	78.792	Macaca_fascicularis
ENSORLG00015002907	rad54l	99	79.060	ENSMMUG00000011568	RAD54L	99	78.792	Macaca_mulatta
ENSORLG00015002907	rad54l	99	78.926	ENSMNEG00000038562	RAD54L	99	78.658	Macaca_nemestrina
ENSORLG00015002907	rad54l	99	79.060	ENSMLEG00000038145	RAD54L	99	78.792	Mandrillus_leucophaeus
ENSORLG00015002907	rad54l	99	84.824	ENSMAMG00000022180	rad54l	99	88.018	Mastacembelus_armatus
ENSORLG00015002907	rad54l	100	82.297	ENSMZEG00005018081	rad54l	100	82.162	Maylandia_zebra
ENSORLG00015002907	rad54l	99	80.270	ENSMGAG00000010634	RAD54L	99	79.865	Meleagris_gallopavo
ENSORLG00015002907	rad54l	99	78.841	ENSMAUG00000020076	Rad54l	99	78.437	Mesocricetus_auratus
ENSORLG00015002907	rad54l	99	78.658	ENSMICG00000003266	RAD54L	99	78.389	Microcebus_murinus
ENSORLG00015002907	rad54l	99	79.111	ENSMOCG00000001778	Rad54l	99	78.706	Microtus_ochrogaster
ENSORLG00015002907	rad54l	99	82.996	ENSMALG00000021148	rad54l	99	82.861	Monopterus_albus
ENSORLG00015002907	rad54l	99	74.151	MGP_CAROLIEiJ_G0026325	Rad54l	99	73.890	Mus_caroli
ENSORLG00015002907	rad54l	99	78.523	ENSMUSG00000028702	Rad54l	99	78.255	Mus_musculus
ENSORLG00015002907	rad54l	99	78.629	MGP_PahariEiJ_G0028657	Rad54l	99	77.419	Mus_pahari
ENSORLG00015002907	rad54l	99	78.658	MGP_SPRETEiJ_G0027297	Rad54l	99	78.389	Mus_spretus
ENSORLG00015002907	rad54l	99	77.718	ENSMPUG00000012883	RAD54L	99	77.852	Mustela_putorius_furo
ENSORLG00015002907	rad54l	99	78.360	ENSMLUG00000003763	RAD54L	99	77.957	Myotis_lucifugus
ENSORLG00015002907	rad54l	99	77.852	ENSNGAG00000024213	Rad54l	99	77.584	Nannospalax_galili
ENSORLG00015002907	rad54l	99	78.658	ENSNLEG00000016548	RAD54L	99	78.389	Nomascus_leucogenys
ENSORLG00015002907	rad54l	92	79.792	ENSMEUG00000006793	RAD54L	99	79.792	Notamacropus_eugenii
ENSORLG00015002907	rad54l	90	82.578	ENSOPRG00000016016	RAD54L	90	82.867	Ochotona_princeps
ENSORLG00015002907	rad54l	99	78.792	ENSODEG00000008519	RAD54L	99	78.523	Octodon_degus
ENSORLG00015002907	rad54l	100	82.568	ENSONIG00000007659	rad54l	100	82.432	Oreochromis_niloticus
ENSORLG00015002907	rad54l	99	78.418	ENSOCUG00000005229	RAD54L	99	78.284	Oryctolagus_cuniculus
ENSORLG00015002907	rad54l	100	99.591	ENSORLG00000002958	rad54l	100	99.591	Oryzias_latipes
ENSORLG00015002907	rad54l	99	99.727	ENSORLG00020006554	rad54l	99	100.000	Oryzias_latipes_hni
ENSORLG00015002907	rad54l	100	96.730	ENSOMEG00000007770	rad54l	100	96.730	Oryzias_melastigma
ENSORLG00015002907	rad54l	99	78.581	ENSOARG00000002264	RAD54L	99	77.644	Ovis_aries
ENSORLG00015002907	rad54l	99	78.658	ENSPPAG00000031222	RAD54L	99	78.389	Pan_paniscus
ENSORLG00015002907	rad54l	99	76.913	ENSPPRG00000010317	RAD54L	99	76.913	Panthera_pardus
ENSORLG00015002907	rad54l	99	76.913	ENSPTIG00000012200	RAD54L	99	76.913	Panthera_tigris_altaica
ENSORLG00015002907	rad54l	99	78.658	ENSPTRG00000000689	RAD54L	99	78.389	Pan_troglodytes
ENSORLG00015002907	rad54l	99	79.060	ENSPANG00000016295	RAD54L	99	78.792	Papio_anubis
ENSORLG00015002907	rad54l	100	78.003	ENSPKIG00000016172	rad54l	100	78.273	Paramormyrops_kingsleyae
ENSORLG00015002907	rad54l	99	80.491	ENSPSIG00000003258	RAD54L	94	83.285	Pelodiscus_sinensis
ENSORLG00015002907	rad54l	99	79.456	ENSPMGG00000016335	rad54l	99	79.048	Periophthalmus_magnuspinnatus
ENSORLG00015002907	rad54l	99	78.706	ENSPEMG00000011422	Rad54l	99	78.167	Peromyscus_maniculatus_bairdii
ENSORLG00015002907	rad54l	99	70.415	ENSPMAG00000007719	rad54l	99	70.281	Petromyzon_marinus
ENSORLG00015002907	rad54l	99	79.408	ENSPCIG00000029032	RAD54L	99	79.139	Phascolarctos_cinereus
ENSORLG00015002907	rad54l	86	86.299	ENSPFOG00000013732	rad54l	98	87.019	Poecilia_formosa
ENSORLG00015002907	rad54l	83	84.578	ENSPLAG00000023416	rad54l	99	84.578	Poecilia_latipinna
ENSORLG00015002907	rad54l	91	83.804	ENSPMEG00000008299	rad54l	100	83.358	Poecilia_mexicana
ENSORLG00015002907	rad54l	99	83.198	ENSPREG00000019955	rad54l	99	82.791	Poecilia_reticulata
ENSORLG00015002907	rad54l	93	77.540	ENSPPYG00000001398	RAD54L	99	77.184	Pongo_abelii
ENSORLG00015002907	rad54l	79	82.039	ENSPCAG00000005323	RAD54L	80	82.039	Procavia_capensis
ENSORLG00015002907	rad54l	99	78.523	ENSPCOG00000015423	RAD54L	99	78.255	Propithecus_coquereli
ENSORLG00015002907	rad54l	99	79.650	ENSPNYG00000002942	rad54l	99	79.650	Pundamilia_nyererei
ENSORLG00015002907	rad54l	100	83.806	ENSPNAG00000012483	rad54l	100	83.806	Pygocentrus_nattereri
ENSORLG00015002907	rad54l	99	78.389	ENSRNOG00000013148	Rad54l	99	77.987	Rattus_norvegicus
ENSORLG00015002907	rad54l	99	79.060	ENSRBIG00000043495	RAD54L	99	78.792	Rhinopithecus_bieti
ENSORLG00015002907	rad54l	99	79.060	ENSRROG00000020844	RAD54L	99	78.792	Rhinopithecus_roxellana
ENSORLG00015002907	rad54l	81	49.071	YGL163C	RAD54	71	49.309	Saccharomyces_cerevisiae
ENSORLG00015002907	rad54l	99	78.792	ENSSBOG00000024672	RAD54L	99	78.523	Saimiri_boliviensis_boliviensis
ENSORLG00015002907	rad54l	99	79.839	ENSSHAG00000000110	RAD54L	99	79.704	Sarcophilus_harrisii
ENSORLG00015002907	rad54l	100	86.486	ENSSDUG00000019147	rad54l	100	85.946	Seriola_dumerili
ENSORLG00015002907	rad54l	100	86.757	ENSSLDG00000012330	rad54l	100	86.216	Seriola_lalandi_dorsalis
ENSORLG00015002907	rad54l	84	76.404	ENSSARG00000006689	RAD54L	100	76.404	Sorex_araneus
ENSORLG00015002907	rad54l	99	86.296	ENSSPAG00000011016	rad54l	99	86.160	Stegastes_partitus
ENSORLG00015002907	rad54l	99	78.658	ENSSSCG00000003905	RAD54L	99	78.255	Sus_scrofa
ENSORLG00015002907	rad54l	99	79.380	ENSTGUG00000008233	RAD54L	99	78.976	Taeniopygia_guttata
ENSORLG00015002907	rad54l	99	82.698	ENSTRUG00000008410	rad54l	99	82.923	Takifugu_rubripes
ENSORLG00015002907	rad54l	99	82.321	ENSTNIG00000004716	rad54l	99	81.818	Tetraodon_nigroviridis
ENSORLG00015002907	rad54l	99	73.020	ENSTTRG00000006315	RAD54L	99	73.020	Tursiops_truncatus
ENSORLG00015002907	rad54l	99	77.162	ENSUAMG00000011824	RAD54L	99	77.297	Ursus_americanus
ENSORLG00015002907	rad54l	99	76.081	ENSUMAG00000023603	RAD54L	99	76.216	Ursus_maritimus
ENSORLG00015002907	rad54l	99	77.315	ENSVVUG00000007201	RAD54L	99	77.450	Vulpes_vulpes
ENSORLG00015002907	rad54l	96	74.930	ENSXETG00000004369	rad54l	97	76.012	Xenopus_tropicalis
ENSORLG00015002907	rad54l	55	81.373	ENSXCOG00000016028	rad54l	84	81.886	Xiphophorus_couchianus