EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015002968 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 3250 bases
Position: chr23:23738821-23742070
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002297	RtcB	PF01139.17	2e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015011198	-	1518	-	ENSORLP00015002297	505 (aa)	-	-

Gene Model

Click here to download ENSORLG00015002968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015002968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015002968	rtcb	100	94.059	ENSG00000100220	RTCB	100	94.059	Homo_sapiens
ENSORLG00015002968	rtcb	100	96.634	ENSAPOG00000006040	rtcb	100	96.634	Acanthochromis_polyacanthus
ENSORLG00015002968	rtcb	100	94.059	ENSAMEG00000016152	RTCB	100	94.059	Ailuropoda_melanoleuca
ENSORLG00015002968	rtcb	100	91.683	ENSACIG00000009083	rtcb	100	91.683	Amphilophus_citrinellus
ENSORLG00015002968	rtcb	100	96.634	ENSAOCG00000005662	rtcb	100	98.261	Amphiprion_ocellaris
ENSORLG00015002968	rtcb	100	96.634	ENSAPEG00000024701	rtcb	100	96.634	Amphiprion_percula
ENSORLG00015002968	rtcb	96	92.402	ENSAPEG00000024653	rtcb	100	92.402	Amphiprion_percula
ENSORLG00015002968	rtcb	100	96.634	ENSATEG00000000618	rtcb	100	96.634	Anabas_testudineus
ENSORLG00015002968	rtcb	100	91.137	ENSACAG00000014817	RTCB	100	91.137	Anolis_carolinensis
ENSORLG00015002968	rtcb	100	79.208	ENSANAG00000018191	-	91	79.208	Aotus_nancymaae
ENSORLG00015002968	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSORLG00015002968	rtcb	100	95.842	ENSACLG00000008367	rtcb	100	96.957	Astatotilapia_calliptera
ENSORLG00015002968	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSORLG00015002968	rtcb	100	94.257	ENSBTAG00000011070	RTCB	100	94.257	Bos_taurus
ENSORLG00015002968	rtcb	100	74.059	WBGene00008877	rtcb-1	100	74.059	Caenorhabditis_elegans
ENSORLG00015002968	rtcb	100	93.861	ENSCJAG00000006128	RTCB	100	93.861	Callithrix_jacchus
ENSORLG00015002968	rtcb	100	89.901	ENSCAFG00000010789	-	100	89.901	Canis_familiaris
ENSORLG00015002968	rtcb	100	94.059	ENSCAFG00000001785	RTCB	100	94.059	Canis_familiaris
ENSORLG00015002968	rtcb	100	94.059	ENSCAFG00020004890	-	100	94.059	Canis_lupus_dingo
ENSORLG00015002968	rtcb	87	90.000	ENSCAFG00020018953	-	99	90.000	Canis_lupus_dingo
ENSORLG00015002968	rtcb	100	94.059	ENSCHIG00000027009	-	100	94.059	Capra_hircus
ENSORLG00015002968	rtcb	100	93.663	ENSTSYG00000012320	RTCB	100	93.663	Carlito_syrichta
ENSORLG00015002968	rtcb	94	94.340	ENSCAPG00000011647	RTCB	96	94.340	Cavia_aperea
ENSORLG00015002968	rtcb	100	93.861	ENSCCAG00000000618	RTCB	100	93.861	Cebus_capucinus
ENSORLG00015002968	rtcb	100	94.059	ENSCATG00000033424	RTCB	100	94.059	Cercocebus_atys
ENSORLG00015002968	rtcb	100	94.455	ENSCLAG00000007997	RTCB	100	94.455	Chinchilla_lanigera
ENSORLG00015002968	rtcb	100	93.861	ENSCSAG00000008351	RTCB	100	93.861	Chlorocebus_sabaeus
ENSORLG00015002968	rtcb	100	80.198	ENSCHOG00000009123	RTCB	100	80.198	Choloepus_hoffmanni
ENSORLG00015002968	rtcb	100	93.861	ENSCPBG00000023184	RTCB	100	93.861	Chrysemys_picta_bellii
ENSORLG00015002968	rtcb	100	82.376	ENSCING00000003830	-	100	82.376	Ciona_intestinalis
ENSORLG00015002968	rtcb	100	82.574	ENSCSAVG00000008124	-	100	81.777	Ciona_savignyi
ENSORLG00015002968	rtcb	100	90.297	ENSCANG00000001891	RTCB	100	90.297	Colobus_angolensis_palliatus
ENSORLG00015002968	rtcb	100	93.663	ENSCGRG00001011173	Rtcb	100	93.663	Cricetulus_griseus_chok1gshd
ENSORLG00015002968	rtcb	93	94.692	ENSCGRG00000009587	-	96	94.692	Cricetulus_griseus_crigri
ENSORLG00015002968	rtcb	100	96.040	ENSCSEG00000003986	rtcb	100	96.040	Cynoglossus_semilaevis
ENSORLG00015002968	rtcb	82	96.635	ENSCVAG00000000569	rtcb	95	96.635	Cyprinodon_variegatus
ENSORLG00015002968	rtcb	100	96.040	ENSDARG00000101047	rtcb	100	96.040	Danio_rerio
ENSORLG00015002968	rtcb	80	90.418	ENSDNOG00000012425	RTCB	99	90.418	Dasypus_novemcinctus
ENSORLG00015002968	rtcb	100	93.465	ENSDORG00000010855	Rtcb	100	93.465	Dipodomys_ordii
ENSORLG00015002968	rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSORLG00015002968	rtcb	100	87.921	ENSETEG00000001988	RTCB	100	87.921	Echinops_telfairi
ENSORLG00015002968	rtcb	100	86.337	ENSEBUG00000014235	rtcb	100	86.337	Eptatretus_burgeri
ENSORLG00015002968	rtcb	100	93.861	ENSEASG00005019059	RTCB	100	93.861	Equus_asinus_asinus
ENSORLG00015002968	rtcb	100	93.861	ENSECAG00000023998	RTCB	100	93.861	Equus_caballus
ENSORLG00015002968	rtcb	89	85.459	ENSEEUG00000006251	RTCB	100	85.459	Erinaceus_europaeus
ENSORLG00015002968	rtcb	100	83.554	ENSELUG00000009275	rtcb	100	83.554	Esox_lucius
ENSORLG00015002968	rtcb	100	94.059	ENSFCAG00000026480	RTCB	100	94.059	Felis_catus
ENSORLG00015002968	rtcb	100	94.455	ENSFALG00000013334	RTCB	100	94.455	Ficedula_albicollis
ENSORLG00015002968	rtcb	100	93.861	ENSFDAG00000018150	RTCB	100	93.861	Fukomys_damarensis
ENSORLG00015002968	rtcb	100	96.436	ENSFHEG00000009595	rtcb	100	96.436	Fundulus_heteroclitus
ENSORLG00015002968	rtcb	100	93.663	ENSGMOG00000018882	rtcb	100	93.663	Gadus_morhua
ENSORLG00015002968	rtcb	100	93.861	ENSGALG00000012611	RTCB	100	93.861	Gallus_gallus
ENSORLG00015002968	rtcb	100	97.030	ENSGAFG00000004198	rtcb	100	97.030	Gambusia_affinis
ENSORLG00015002968	rtcb	100	95.644	ENSGACG00000000586	rtcb	100	95.644	Gasterosteus_aculeatus
ENSORLG00015002968	rtcb	93	93.617	ENSGAGG00000019133	RTCB	98	93.617	Gopherus_agassizii
ENSORLG00015002968	rtcb	100	94.059	ENSGGOG00000011402	RTCB	100	94.059	Gorilla_gorilla
ENSORLG00015002968	rtcb	100	95.842	ENSHBUG00000020571	rtcb	100	95.842	Haplochromis_burtoni
ENSORLG00015002968	rtcb	93	67.804	ENSHGLG00000001066	-	99	67.804	Heterocephalus_glaber_female
ENSORLG00015002968	rtcb	100	93.861	ENSHGLG00000004492	RTCB	100	93.861	Heterocephalus_glaber_female
ENSORLG00015002968	rtcb	100	93.861	ENSHGLG00100008965	RTCB	100	93.861	Heterocephalus_glaber_male
ENSORLG00015002968	rtcb	100	94.477	ENSHCOG00000006450	rtcb	100	94.477	Hippocampus_comes
ENSORLG00015002968	rtcb	100	95.248	ENSIPUG00000015443	rtcb	100	95.248	Ictalurus_punctatus
ENSORLG00015002968	rtcb	100	93.861	ENSSTOG00000003878	RTCB	100	93.861	Ictidomys_tridecemlineatus
ENSORLG00015002968	rtcb	100	94.059	ENSJJAG00000010667	Rtcb	100	94.059	Jaculus_jaculus
ENSORLG00015002968	rtcb	100	97.228	ENSKMAG00000013178	rtcb	100	97.228	Kryptolebias_marmoratus
ENSORLG00015002968	rtcb	100	97.030	ENSLBEG00000010566	RTCB	100	97.030	Labrus_bergylta
ENSORLG00015002968	rtcb	100	95.842	ENSLBEG00000000214	rtcb	100	95.842	Labrus_bergylta
ENSORLG00015002968	rtcb	100	94.257	ENSLACG00000013033	RTCB	100	94.257	Latimeria_chalumnae
ENSORLG00015002968	rtcb	100	95.842	ENSLOCG00000016515	rtcb	99	95.842	Lepisosteus_oculatus
ENSORLG00015002968	rtcb	100	93.267	ENSLAFG00000002082	RTCB	100	93.267	Loxodonta_africana
ENSORLG00015002968	rtcb	100	93.861	ENSMFAG00000034419	RTCB	100	93.861	Macaca_fascicularis
ENSORLG00015002968	rtcb	100	93.861	ENSMMUG00000006720	RTCB	100	93.861	Macaca_mulatta
ENSORLG00015002968	rtcb	100	93.861	ENSMNEG00000040669	RTCB	100	93.861	Macaca_nemestrina
ENSORLG00015002968	rtcb	100	94.059	ENSMLEG00000040505	RTCB	100	94.059	Mandrillus_leucophaeus
ENSORLG00015002968	rtcb	100	97.030	ENSMAMG00000020676	rtcb	100	97.030	Mastacembelus_armatus
ENSORLG00015002968	rtcb	100	95.842	ENSMZEG00005018942	rtcb	100	95.842	Maylandia_zebra
ENSORLG00015002968	rtcb	100	93.491	ENSMGAG00000012805	RTCB	100	93.491	Meleagris_gallopavo
ENSORLG00015002968	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSORLG00015002968	rtcb	100	93.861	ENSMICG00000013303	-	100	93.861	Microcebus_murinus
ENSORLG00015002968	rtcb	100	74.851	ENSMICG00000036677	-	100	74.851	Microcebus_murinus
ENSORLG00015002968	rtcb	100	94.059	ENSMOCG00000002440	Rtcb	100	94.059	Microtus_ochrogaster
ENSORLG00015002968	rtcb	100	96.832	ENSMMOG00000005987	rtcb	100	96.832	Mola_mola
ENSORLG00015002968	rtcb	100	94.455	ENSMODG00000001414	RTCB	100	94.455	Monodelphis_domestica
ENSORLG00015002968	rtcb	100	96.832	ENSMALG00000007603	rtcb	100	96.832	Monopterus_albus
ENSORLG00015002968	rtcb	100	93.663	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.663	Mus_caroli
ENSORLG00015002968	rtcb	100	93.663	ENSMUSG00000001783	Rtcb	100	93.663	Mus_musculus
ENSORLG00015002968	rtcb	100	93.663	MGP_PahariEiJ_G0031396	Rtcb	100	93.663	Mus_pahari
ENSORLG00015002968	rtcb	100	93.663	MGP_SPRETEiJ_G0016507	Rtcb	100	93.663	Mus_spretus
ENSORLG00015002968	rtcb	100	94.059	ENSMPUG00000012285	RTCB	100	94.059	Mustela_putorius_furo
ENSORLG00015002968	rtcb	100	91.519	ENSMLUG00000007803	RTCB	100	91.519	Myotis_lucifugus
ENSORLG00015002968	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSORLG00015002968	rtcb	100	95.842	ENSNBRG00000017202	rtcb	100	95.842	Neolamprologus_brichardi
ENSORLG00015002968	rtcb	100	94.059	ENSNLEG00000004960	RTCB	100	94.059	Nomascus_leucogenys
ENSORLG00015002968	rtcb	100	70.297	ENSMEUG00000007809	-	100	70.297	Notamacropus_eugenii
ENSORLG00015002968	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSORLG00015002968	rtcb	100	62.970	ENSODEG00000005042	-	100	62.970	Octodon_degus
ENSORLG00015002968	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSORLG00015002968	rtcb	100	96.832	ENSONIG00000007474	rtcb	100	96.832	Oreochromis_niloticus
ENSORLG00015002968	rtcb	100	94.059	ENSOANG00000005524	RTCB	100	94.059	Ornithorhynchus_anatinus
ENSORLG00015002968	rtcb	93	93.830	ENSOCUG00000008270	RTCB	96	93.830	Oryctolagus_cuniculus
ENSORLG00015002968	rtcb	100	99.802	ENSORLG00000020093	rtcb	100	99.802	Oryzias_latipes
ENSORLG00015002968	rtcb	100	99.802	ENSORLG00020003706	rtcb	100	99.802	Oryzias_latipes_hni
ENSORLG00015002968	rtcb	100	99.010	ENSOMEG00000021278	rtcb	100	99.010	Oryzias_melastigma
ENSORLG00015002968	rtcb	100	93.267	ENSOGAG00000001425	RTCB	100	93.267	Otolemur_garnettii
ENSORLG00015002968	rtcb	100	94.059	ENSOARG00000018008	RTCB	100	94.059	Ovis_aries
ENSORLG00015002968	rtcb	100	94.059	ENSPPAG00000028667	RTCB	100	94.059	Pan_paniscus
ENSORLG00015002968	rtcb	100	94.059	ENSPPRG00000004038	RTCB	100	94.059	Panthera_pardus
ENSORLG00015002968	rtcb	94	90.105	ENSPTIG00000020499	RTCB	97	91.158	Panthera_tigris_altaica
ENSORLG00015002968	rtcb	100	94.059	ENSPTRG00000014287	RTCB	100	94.059	Pan_troglodytes
ENSORLG00015002968	rtcb	100	93.861	ENSPANG00000016035	RTCB	100	93.861	Papio_anubis
ENSORLG00015002968	rtcb	100	94.653	ENSPKIG00000001881	rtcb	100	94.653	Paramormyrops_kingsleyae
ENSORLG00015002968	rtcb	91	94.565	ENSPSIG00000011690	RTCB	100	94.565	Pelodiscus_sinensis
ENSORLG00015002968	rtcb	100	96.436	ENSPMGG00000016672	rtcb	100	96.436	Periophthalmus_magnuspinnatus
ENSORLG00015002968	rtcb	100	93.663	ENSPEMG00000019548	Rtcb	100	93.663	Peromyscus_maniculatus_bairdii
ENSORLG00015002968	rtcb	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSORLG00015002968	rtcb	100	94.455	ENSPCIG00000009467	RTCB	100	94.455	Phascolarctos_cinereus
ENSORLG00015002968	rtcb	100	97.426	ENSPFOG00000003058	rtcb	100	97.426	Poecilia_formosa
ENSORLG00015002968	rtcb	100	97.228	ENSPLAG00000017663	rtcb	100	97.228	Poecilia_latipinna
ENSORLG00015002968	rtcb	100	97.426	ENSPMEG00000006227	rtcb	100	97.426	Poecilia_mexicana
ENSORLG00015002968	rtcb	100	96.832	ENSPREG00000018467	rtcb	100	96.832	Poecilia_reticulata
ENSORLG00015002968	rtcb	100	94.059	ENSPPYG00000011752	RTCB	100	94.059	Pongo_abelii
ENSORLG00015002968	rtcb	93	77.331	ENSPCAG00000013641	RTCB	100	77.331	Procavia_capensis
ENSORLG00015002968	rtcb	100	94.059	ENSPCOG00000017243	RTCB	100	94.059	Propithecus_coquereli
ENSORLG00015002968	rtcb	93	92.979	ENSPVAG00000002380	RTCB	100	92.979	Pteropus_vampyrus
ENSORLG00015002968	rtcb	100	95.842	ENSPNYG00000022760	rtcb	100	95.842	Pundamilia_nyererei
ENSORLG00015002968	rtcb	100	95.644	ENSPNAG00000009209	rtcb	100	95.644	Pygocentrus_nattereri
ENSORLG00015002968	rtcb	100	93.663	ENSRNOG00000004813	Rtcb	100	93.663	Rattus_norvegicus
ENSORLG00015002968	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSORLG00015002968	rtcb	100	89.109	ENSSBOG00000020085	-	100	89.109	Saimiri_boliviensis_boliviensis
ENSORLG00015002968	rtcb	94	94.937	ENSSHAG00000016277	RTCB	100	94.937	Sarcophilus_harrisii
ENSORLG00015002968	rtcb	100	95.644	ENSSFOG00015000763	rtcb	100	95.644	Scleropages_formosus
ENSORLG00015002968	rtcb	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSORLG00015002968	rtcb	100	93.267	ENSSMAG00000005096	rtcb	100	93.267	Scophthalmus_maximus
ENSORLG00015002968	rtcb	100	95.446	ENSSDUG00000012605	rtcb	100	95.446	Seriola_dumerili
ENSORLG00015002968	rtcb	100	95.644	ENSSLDG00000019458	rtcb	100	95.644	Seriola_lalandi_dorsalis
ENSORLG00015002968	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSORLG00015002968	rtcb	100	93.069	ENSSPUG00000012814	RTCB	100	93.069	Sphenodon_punctatus
ENSORLG00015002968	rtcb	100	96.634	ENSSPAG00000004623	rtcb	100	96.634	Stegastes_partitus
ENSORLG00015002968	rtcb	100	94.059	ENSSSCG00000000158	RTCB	100	94.059	Sus_scrofa
ENSORLG00015002968	rtcb	100	94.455	ENSTGUG00000010947	RTCB	99	94.455	Taeniopygia_guttata
ENSORLG00015002968	rtcb	91	97.174	ENSTRUG00000009880	rtcb	100	97.174	Takifugu_rubripes
ENSORLG00015002968	rtcb	100	95.050	ENSTNIG00000002484	rtcb	100	95.050	Tetraodon_nigroviridis
ENSORLG00015002968	rtcb	100	80.990	ENSTBEG00000004418	RTCB	100	80.990	Tupaia_belangeri
ENSORLG00015002968	rtcb	93	93.404	ENSTTRG00000006417	RTCB	100	93.404	Tursiops_truncatus
ENSORLG00015002968	rtcb	100	94.059	ENSUAMG00000022792	RTCB	100	94.059	Ursus_americanus
ENSORLG00015002968	rtcb	100	94.059	ENSUMAG00000017225	RTCB	100	94.059	Ursus_maritimus
ENSORLG00015002968	rtcb	100	93.861	ENSVPAG00000005375	RTCB	100	93.861	Vicugna_pacos
ENSORLG00015002968	rtcb	100	94.059	ENSVVUG00000023408	RTCB	100	94.595	Vulpes_vulpes
ENSORLG00015002968	rtcb	100	93.069	ENSXETG00000011523	rtcb	100	93.069	Xenopus_tropicalis
ENSORLG00015002968	rtcb	100	97.030	ENSXMAG00000002855	rtcb	100	97.030	Xiphophorus_maculatus