EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015003237 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3730 bases
Position: chr1:12736663-12740392
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023333	MMR_HSR1	PF01926.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010751	-	3649	-	ENSORLP00015023333	538 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015003237	-	52	38.276	ENSORLG00015004505	-	61	39.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003237	-	75	35.714	ENSAPOG00000001444	-	67	34.653	Acanthochromis_polyacanthus
ENSORLG00015003237	-	97	53.065	ENSAPOG00000007181	-	99	52.390	Acanthochromis_polyacanthus
ENSORLG00015003237	-	50	37.778	ENSACIG00000016635	-	88	38.554	Amphilophus_citrinellus
ENSORLG00015003237	-	50	37.546	ENSACIG00000012714	-	86	37.209	Amphilophus_citrinellus
ENSORLG00015003237	-	50	36.594	ENSACIG00000019149	-	83	37.410	Amphilophus_citrinellus
ENSORLG00015003237	-	50	38.321	ENSACIG00000022355	-	85	38.583	Amphilophus_citrinellus
ENSORLG00015003237	-	50	63.941	ENSATEG00000019504	-	82	65.844	Anabas_testudineus
ENSORLG00015003237	-	51	39.649	ENSACLG00000005659	-	84	41.473	Astatotilapia_calliptera
ENSORLG00015003237	-	64	35.876	ENSACLG00000005625	-	85	32.438	Astatotilapia_calliptera
ENSORLG00015003237	-	51	34.138	ENSAMXG00000035963	-	92	31.987	Astyanax_mexicanus
ENSORLG00015003237	-	51	30.325	ENSAMXG00000043046	-	84	31.707	Astyanax_mexicanus
ENSORLG00015003237	-	63	32.768	ENSAMXG00000035548	-	54	38.189	Astyanax_mexicanus
ENSORLG00015003237	-	51	31.047	ENSAMXG00000039994	-	93	33.579	Astyanax_mexicanus
ENSORLG00015003237	-	51	35.897	ENSAMXG00000031962	-	74	39.823	Astyanax_mexicanus
ENSORLG00015003237	-	83	32.798	ENSAMXG00000043838	-	78	30.882	Astyanax_mexicanus
ENSORLG00015003237	-	50	33.333	ENSAMXG00000036554	-	67	35.135	Astyanax_mexicanus
ENSORLG00015003237	-	54	33.447	ENSCSEG00000006826	-	75	33.091	Cynoglossus_semilaevis
ENSORLG00015003237	-	100	63.451	ENSCVAG00000006929	-	99	63.451	Cyprinodon_variegatus
ENSORLG00015003237	-	50	40.370	ENSCVAG00000005473	-	86	40.078	Cyprinodon_variegatus
ENSORLG00015003237	-	52	36.426	ENSCVAG00000000429	-	79	36.614	Cyprinodon_variegatus
ENSORLG00015003237	-	79	32.522	ENSCVAG00000018793	-	54	40.079	Cyprinodon_variegatus
ENSORLG00015003237	-	63	35.977	ENSDARG00000079471	si:dkey-88j15.4	56	37.313	Danio_rerio
ENSORLG00015003237	-	51	33.333	ENSELUG00000007650	-	74	34.599	Esox_lucius
ENSORLG00015003237	-	62	38.279	ENSFHEG00000013922	-	69	40.784	Fundulus_heteroclitus
ENSORLG00015003237	-	50	33.216	ENSFHEG00000014906	-	81	32.734	Fundulus_heteroclitus
ENSORLG00015003237	-	100	63.080	ENSGAFG00000020589	-	97	63.080	Gambusia_affinis
ENSORLG00015003237	-	55	37.000	ENSGAFG00000017534	-	80	39.004	Gambusia_affinis
ENSORLG00015003237	-	63	55.752	ENSGACG00000016194	-	100	57.057	Gasterosteus_aculeatus
ENSORLG00015003237	-	51	39.146	ENSHBUG00000000446	-	83	41.313	Haplochromis_burtoni
ENSORLG00015003237	-	52	39.362	ENSHBUG00000016739	-	75	39.600	Haplochromis_burtoni
ENSORLG00015003237	-	97	46.935	ENSHCOG00000000067	-	98	45.301	Hippocampus_comes
ENSORLG00015003237	-	54	32.547	ENSIPUG00000009955	-	77	32.227	Ictalurus_punctatus
ENSORLG00015003237	-	53	68.531	ENSKMAG00000000074	-	95	68.531	Kryptolebias_marmoratus
ENSORLG00015003237	-	53	39.298	ENSKMAG00000010832	-	73	40.948	Kryptolebias_marmoratus
ENSORLG00015003237	-	52	35.069	ENSLBEG00000004167	-	82	37.037	Labrus_bergylta
ENSORLG00015003237	-	64	34.247	ENSLBEG00000017905	-	83	43.386	Labrus_bergylta
ENSORLG00015003237	-	50	36.567	ENSLOCG00000002945	-	67	36.567	Lepisosteus_oculatus
ENSORLG00015003237	-	54	56.055	ENSMAMG00000020006	-	81	58.661	Mastacembelus_armatus
ENSORLG00015003237	-	50	41.392	ENSMZEG00005020801	-	78	42.353	Maylandia_zebra
ENSORLG00015003237	-	50	44.853	ENSMZEG00005016562	-	87	45.833	Maylandia_zebra
ENSORLG00015003237	-	57	36.013	ENSMZEG00005027854	-	82	38.824	Maylandia_zebra
ENSORLG00015003237	-	62	35.608	ENSMZEG00005021247	-	75	37.195	Maylandia_zebra
ENSORLG00015003237	-	51	38.929	ENSMALG00000004242	-	77	43.363	Monopterus_albus
ENSORLG00015003237	-	67	35.263	ENSMALG00000008656	-	66	33.176	Monopterus_albus
ENSORLG00015003237	-	54	40.411	ENSNBRG00000004025	-	85	45.291	Neolamprologus_brichardi
ENSORLG00015003237	-	50	39.130	ENSNBRG00000005951	-	58	42.365	Neolamprologus_brichardi
ENSORLG00015003237	-	54	37.778	ENSNBRG00000023111	-	82	37.838	Neolamprologus_brichardi
ENSORLG00015003237	-	51	37.091	ENSNBRG00000005934	-	71	36.471	Neolamprologus_brichardi
ENSORLG00015003237	-	50	40.741	ENSONIG00000014258	-	78	40.625	Oreochromis_niloticus
ENSORLG00015003237	-	52	37.370	ENSONIG00000000240	-	88	37.692	Oreochromis_niloticus
ENSORLG00015003237	-	51	37.634	ENSONIG00000014260	-	81	39.113	Oreochromis_niloticus
ENSORLG00015003237	-	100	98.513	ENSORLG00000026303	-	100	98.513	Oryzias_latipes
ENSORLG00015003237	-	100	98.885	ENSORLG00020005613	-	100	98.885	Oryzias_latipes_hni
ENSORLG00015003237	-	53	40.972	ENSPMGG00000001433	-	80	42.629	Periophthalmus_magnuspinnatus
ENSORLG00015003237	-	55	35.948	ENSPMGG00000024067	-	76	39.453	Periophthalmus_magnuspinnatus
ENSORLG00015003237	-	75	58.358	ENSPFOG00000009457	-	100	55.087	Poecilia_formosa
ENSORLG00015003237	-	56	36.570	ENSPFOG00000000263	-	60	36.538	Poecilia_formosa
ENSORLG00015003237	-	60	35.061	ENSPLAG00000003471	-	56	40.000	Poecilia_latipinna
ENSORLG00015003237	-	57	35.048	ENSPMEG00000018453	-	66	40.291	Poecilia_mexicana
ENSORLG00015003237	-	53	38.144	ENSPREG00000015263	-	89	38.976	Poecilia_reticulata
ENSORLG00015003237	-	56	37.500	ENSPREG00000016801	-	65	43.810	Poecilia_reticulata
ENSORLG00015003237	-	53	37.413	ENSPNYG00000004179	-	80	37.063	Pundamilia_nyererei
ENSORLG00015003237	-	50	31.818	ENSPNYG00000013308	-	79	32.103	Pundamilia_nyererei
ENSORLG00015003237	-	67	34.006	ENSPNAG00000026004	-	64	30.947	Pygocentrus_nattereri
ENSORLG00015003237	-	56	35.943	ENSPNAG00000025977	-	54	30.556	Pygocentrus_nattereri
ENSORLG00015003237	-	50	37.500	ENSPNAG00000008987	-	58	39.095	Pygocentrus_nattereri
ENSORLG00015003237	-	77	32.787	ENSPNAG00000025951	-	53	31.381	Pygocentrus_nattereri
ENSORLG00015003237	-	56	37.634	ENSPNAG00000026043	-	65	31.567	Pygocentrus_nattereri
ENSORLG00015003237	-	51	36.727	ENSPNAG00000008992	-	64	38.843	Pygocentrus_nattereri
ENSORLG00015003237	-	66	36.188	ENSPNAG00000026220	-	69	39.231	Pygocentrus_nattereri
ENSORLG00015003237	-	67	38.938	ENSPNAG00000004032	-	55	36.000	Pygocentrus_nattereri
ENSORLG00015003237	-	66	35.933	ENSPNAG00000025944	-	68	31.306	Pygocentrus_nattereri
ENSORLG00015003237	-	65	32.398	ENSSFOG00015006469	-	61	37.946	Scleropages_formosus
ENSORLG00015003237	-	55	31.894	ENSSFOG00015015949	si:ch1073-185p12.2	58	33.333	Scleropages_formosus
ENSORLG00015003237	-	51	35.766	ENSSLDG00000001623	-	92	35.798	Seriola_lalandi_dorsalis
ENSORLG00015003237	-	50	38.095	ENSSLDG00000006746	-	87	42.347	Seriola_lalandi_dorsalis
ENSORLG00015003237	-	50	38.235	ENSSLDG00000013116	-	91	37.743	Seriola_lalandi_dorsalis
ENSORLG00015003237	-	50	34.603	ENSXCOG00000012536	-	71	42.289	Xiphophorus_couchianus
ENSORLG00015003237	-	55	35.463	ENSXMAG00000028084	-	82	35.662	Xiphophorus_maculatus
ENSORLG00015003237	-	55	35.762	ENSXMAG00000029429	-	81	37.165	Xiphophorus_maculatus