EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015003266 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6101 bases
Position: chr4:5737502-5743602
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002585	Mitoc_L55	PF09776.9	4.6e-37	1	1
ENSORLP00015002581	Mitoc_L55	PF09776.9	4.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010718	-	411	-	ENSORLP00015002585	136 (aa)	-	-
ENSORLT00015010724	-	405	-	ENSORLP00015002581	134 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003266	zgc:171480	78	68.269	ENSAPOG00000002881	zgc:171480	72	68.269	Acanthochromis_polyacanthus
ENSORLG00015003266	zgc:171480	78	69.231	ENSACIG00000001646	zgc:171480	76	69.231	Amphilophus_citrinellus
ENSORLG00015003266	zgc:171480	78	69.231	ENSAOCG00000016155	zgc:171480	73	68.571	Amphiprion_ocellaris
ENSORLG00015003266	zgc:171480	78	70.192	ENSAPEG00000022327	zgc:171480	73	69.524	Amphiprion_percula
ENSORLG00015003266	zgc:171480	98	58.015	ENSATEG00000005625	zgc:171480	86	58.015	Anabas_testudineus
ENSORLG00015003266	zgc:171480	75	51.485	ENSACAG00000006897	-	80	51.485	Anolis_carolinensis
ENSORLG00015003266	zgc:171480	78	65.385	ENSACLG00000005172	zgc:171480	75	65.385	Astatotilapia_calliptera
ENSORLG00015003266	zgc:171480	74	59.596	ENSAMXG00000043839	zgc:171480	76	59.596	Astyanax_mexicanus
ENSORLG00015003266	zgc:171480	74	56.436	ENSCPBG00000001771	-	81	56.436	Chrysemys_picta_bellii
ENSORLG00015003266	zgc:171480	94	50.000	ENSCSEG00000019533	zgc:171480	94	50.000	Cynoglossus_semilaevis
ENSORLG00015003266	zgc:171480	75	54.000	ENSDARG00000043402	zgc:171480	75	54.000	Danio_rerio
ENSORLG00015003266	zgc:171480	74	53.000	ENSELUG00000007716	zgc:171480	76	53.000	Esox_lucius
ENSORLG00015003266	zgc:171480	59	48.101	ENSFALG00000001082	-	60	43.333	Ficedula_albicollis
ENSORLG00015003266	zgc:171480	68	43.617	ENSFALG00000001083	-	94	43.956	Ficedula_albicollis
ENSORLG00015003266	zgc:171480	76	62.745	ENSFHEG00000000203	zgc:171480	82	59.649	Fundulus_heteroclitus
ENSORLG00015003266	zgc:171480	75	67.327	ENSGMOG00000019009	zgc:171480	99	67.327	Gadus_morhua
ENSORLG00015003266	zgc:171480	64	45.349	ENSGALG00000038820	-	100	40.517	Gallus_gallus
ENSORLG00015003266	zgc:171480	93	56.061	ENSGAFG00000004832	-	92	56.061	Gambusia_affinis
ENSORLG00015003266	zgc:171480	69	70.652	ENSGACG00000002136	zgc:171480	100	70.652	Gasterosteus_aculeatus
ENSORLG00015003266	zgc:171480	75	51.000	ENSGAGG00000001806	-	81	51.000	Gopherus_agassizii
ENSORLG00015003266	zgc:171480	78	65.385	ENSHBUG00000007895	zgc:171480	75	65.385	Haplochromis_burtoni
ENSORLG00015003266	zgc:171480	71	68.421	ENSHCOG00000003526	zgc:171480	52	68.421	Hippocampus_comes
ENSORLG00015003266	zgc:171480	74	59.000	ENSIPUG00000001273	mrpl55	76	59.000	Ictalurus_punctatus
ENSORLG00015003266	zgc:171480	79	65.094	ENSKMAG00000002011	zgc:171480	83	65.094	Kryptolebias_marmoratus
ENSORLG00015003266	zgc:171480	75	69.307	ENSLBEG00000010915	zgc:171480	80	69.307	Labrus_bergylta
ENSORLG00015003266	zgc:171480	75	69.307	ENSLBEG00000016107	-	80	69.307	Labrus_bergylta
ENSORLG00015003266	zgc:171480	75	53.922	ENSLACG00000016281	zgc:171480	77	54.455	Latimeria_chalumnae
ENSORLG00015003266	zgc:171480	90	62.016	ENSMAMG00000022250	zgc:171480	87	62.016	Mastacembelus_armatus
ENSORLG00015003266	zgc:171480	78	65.385	ENSMZEG00005015585	zgc:171480	75	65.385	Maylandia_zebra
ENSORLG00015003266	zgc:171480	80	43.925	ENSMGAG00000002612	-	94	43.925	Meleagris_gallopavo
ENSORLG00015003266	zgc:171480	76	50.980	ENSMMOG00000008740	-	77	50.980	Mola_mola
ENSORLG00015003266	zgc:171480	92	57.143	ENSMALG00000019823	zgc:171480	100	57.143	Monopterus_albus
ENSORLG00015003266	zgc:171480	78	65.385	ENSNBRG00000019447	zgc:171480	75	65.385	Neolamprologus_brichardi
ENSORLG00015003266	zgc:171480	78	65.385	ENSONIG00000007645	zgc:171480	77	65.385	Oreochromis_niloticus
ENSORLG00015003266	zgc:171480	100	97.761	ENSORLG00020006963	zgc:171480	100	97.761	Oryzias_latipes_hni
ENSORLG00015003266	zgc:171480	91	82.258	ENSOMEG00000008184	zgc:171480	91	82.258	Oryzias_melastigma
ENSORLG00015003266	zgc:171480	74	58.000	ENSPKIG00000006753	zgc:171480	78	58.000	Paramormyrops_kingsleyae
ENSORLG00015003266	zgc:171480	74	52.475	ENSPSIG00000010893	-	81	52.475	Pelodiscus_sinensis
ENSORLG00015003266	zgc:171480	87	57.025	ENSPMGG00000012657	-	93	57.025	Periophthalmus_magnuspinnatus
ENSORLG00015003266	zgc:171480	68	46.392	ENSPMAG00000000867	zgc:171480	81	45.263	Petromyzon_marinus
ENSORLG00015003266	zgc:171480	74	54.369	ENSPCIG00000021848	-	79	54.369	Phascolarctos_cinereus
ENSORLG00015003266	zgc:171480	86	60.870	ENSPFOG00000012703	zgc:171480	84	61.017	Poecilia_formosa
ENSORLG00015003266	zgc:171480	86	61.739	ENSPREG00000020328	zgc:171480	84	61.864	Poecilia_reticulata
ENSORLG00015003266	zgc:171480	74	58.252	ENSPNAG00000017309	zgc:171480	76	58.252	Pygocentrus_nattereri
ENSORLG00015003266	zgc:171480	74	59.000	ENSSFOG00015015668	mrpl55	76	59.000	Scleropages_formosus
ENSORLG00015003266	zgc:171480	76	66.667	ENSSMAG00000005429	zgc:171480	73	66.667	Scophthalmus_maximus
ENSORLG00015003266	zgc:171480	94	61.111	ENSSDUG00000022556	zgc:171480	84	61.290	Seriola_dumerili
ENSORLG00015003266	zgc:171480	94	60.317	ENSSLDG00000019598	zgc:171480	84	60.484	Seriola_lalandi_dorsalis
ENSORLG00015003266	zgc:171480	90	48.333	ENSSPUG00000000735	-	94	48.333	Sphenodon_punctatus
ENSORLG00015003266	zgc:171480	94	63.492	ENSSPAG00000011598	zgc:171480	85	63.492	Stegastes_partitus
ENSORLG00015003266	zgc:171480	76	64.706	ENSTRUG00000003082	zgc:171480	72	64.706	Takifugu_rubripes
ENSORLG00015003266	zgc:171480	72	67.708	ENSXCOG00000005887	zgc:171480	79	67.708	Xiphophorus_couchianus
ENSORLG00015003266	zgc:171480	86	60.000	ENSXMAG00000007937	zgc:171480	84	60.169	Xiphophorus_maculatus