EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015003435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 8980 bases
Position: chr9:30146434-30155413
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002743	zf-C2H2	PF00096.26	4.1e-12	1	2
ENSORLP00015002743	zf-C2H2	PF00096.26	4.1e-12	2	2
ENSORLP00015002743	zf-met	PF12874.7	9.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010450	-	3642	-	ENSORLP00015002743	388 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015003435	-	100	76.904	ENSORLG00015007621	prdm12b	99	76.904
ENSORLG00015003435	-	68	40.000	ENSORLG00015013760	prdm5	92	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003435	-	87	80.059	ENSG00000130711	PRDM12	99	71.538	Homo_sapiens
ENSORLG00015003435	-	100	78.841	ENSAPOG00000016051	prdm12b	100	79.093	Acanthochromis_polyacanthus
ENSORLG00015003435	-	100	71.538	ENSAPOG00000018234	-	100	71.538	Acanthochromis_polyacanthus
ENSORLG00015003435	-	87	79.118	ENSAMEG00000016234	PRDM12	99	78.824	Ailuropoda_melanoleuca
ENSORLG00015003435	-	100	86.466	ENSACIG00000005193	-	100	86.967	Amphilophus_citrinellus
ENSORLG00015003435	-	100	78.934	ENSACIG00000019578	prdm12b	100	78.680	Amphilophus_citrinellus
ENSORLG00015003435	-	100	78.626	ENSAOCG00000015040	prdm12b	100	79.389	Amphiprion_ocellaris
ENSORLG00015003435	-	100	79.231	ENSAPEG00000015092	prdm12b	100	79.487	Amphiprion_percula
ENSORLG00015003435	-	100	83.715	ENSAPEG00000022849	-	99	83.756	Amphiprion_percula
ENSORLG00015003435	-	100	87.626	ENSATEG00000014595	-	100	87.121	Anabas_testudineus
ENSORLG00015003435	-	87	80.059	ENSANAG00000020616	PRDM12	95	79.472	Aotus_nancymaae
ENSORLG00015003435	-	100	75.641	ENSACLG00000011876	prdm12b	100	74.615	Astatotilapia_calliptera
ENSORLG00015003435	-	100	87.940	ENSACLG00000007631	-	100	89.447	Astatotilapia_calliptera
ENSORLG00015003435	-	100	76.154	ENSAMXG00000008540	PRDM12	100	75.240	Astyanax_mexicanus
ENSORLG00015003435	-	100	79.487	ENSAMXG00000033665	prdm12b	100	78.718	Astyanax_mexicanus
ENSORLG00015003435	-	87	80.352	ENSBTAG00000023797	PRDM12	90	79.765	Bos_taurus
ENSORLG00015003435	-	87	80.059	ENSCJAG00000020540	PRDM12	90	79.472	Callithrix_jacchus
ENSORLG00015003435	-	77	81.940	ENSCAFG00000023076	PRDM12	88	81.605	Canis_familiaris
ENSORLG00015003435	-	87	80.352	ENSCAFG00020024046	PRDM12	89	79.765	Canis_lupus_dingo
ENSORLG00015003435	-	87	80.352	ENSCHIG00000025005	PRDM12	99	72.051	Capra_hircus
ENSORLG00015003435	-	84	78.419	ENSCPOG00000005901	PRDM12	95	78.419	Cavia_porcellus
ENSORLG00015003435	-	87	80.059	ENSCCAG00000037485	PRDM12	89	79.472	Cebus_capucinus
ENSORLG00015003435	-	87	80.059	ENSCATG00000020327	PRDM12	89	79.472	Cercocebus_atys
ENSORLG00015003435	-	89	78.161	ENSCLAG00000005499	PRDM12	91	77.586	Chinchilla_lanigera
ENSORLG00015003435	-	87	80.059	ENSCSAG00000014756	PRDM12	89	79.472	Chlorocebus_sabaeus
ENSORLG00015003435	-	100	75.385	ENSCPBG00000022628	PRDM12	99	73.590	Chrysemys_picta_bellii
ENSORLG00015003435	-	87	80.352	ENSCGRG00001015005	Prdm12	99	72.308	Cricetulus_griseus_chok1gshd
ENSORLG00015003435	-	100	84.848	ENSCVAG00000000944	-	100	87.121	Cyprinodon_variegatus
ENSORLG00015003435	-	100	76.923	ENSCVAG00000017166	prdm12b	100	76.923	Cyprinodon_variegatus
ENSORLG00015003435	-	100	80.256	ENSDARG00000007430	prdm12b	100	77.692	Danio_rerio
ENSORLG00015003435	-	87	79.825	ENSDNOG00000042302	PRDM12	90	79.240	Dasypus_novemcinctus
ENSORLG00015003435	-	87	62.810	ENSEBUG00000016780	prdm12b	74	66.181	Eptatretus_burgeri
ENSORLG00015003435	-	89	79.023	ENSEASG00005008472	PRDM12	99	73.333	Equus_asinus_asinus
ENSORLG00015003435	-	89	79.023	ENSECAG00000005933	PRDM12	99	73.333	Equus_caballus
ENSORLG00015003435	-	100	80.463	ENSELUG00000009905	prdm12b	100	78.406	Esox_lucius
ENSORLG00015003435	-	100	73.671	ENSELUG00000013674	PRDM12	100	74.365	Esox_lucius
ENSORLG00015003435	-	87	80.352	ENSFCAG00000043086	PRDM12	89	79.765	Felis_catus
ENSORLG00015003435	-	100	76.410	ENSFALG00000001445	PRDM12	89	74.872	Ficedula_albicollis
ENSORLG00015003435	-	100	84.289	ENSFHEG00000007746	-	100	83.541	Fundulus_heteroclitus
ENSORLG00015003435	-	100	77.041	ENSFHEG00000003944	prdm12b	100	76.786	Fundulus_heteroclitus
ENSORLG00015003435	-	100	75.897	ENSGMOG00000011797	prdm12b	100	76.154	Gadus_morhua
ENSORLG00015003435	-	100	76.410	ENSGALG00000003895	PRDM12	99	74.615	Gallus_gallus
ENSORLG00015003435	-	100	77.179	ENSGAFG00000010827	prdm12b	99	77.692	Gambusia_affinis
ENSORLG00015003435	-	100	77.296	ENSGACG00000016713	prdm12b	99	76.020	Gasterosteus_aculeatus
ENSORLG00015003435	-	100	75.385	ENSGAGG00000014083	PRDM12	99	73.590	Gopherus_agassizii
ENSORLG00015003435	-	87	79.765	ENSGGOG00000010568	PRDM12	99	71.795	Gorilla_gorilla
ENSORLG00015003435	-	100	79.028	ENSHBUG00000022878	prdm12b	100	78.005	Haplochromis_burtoni
ENSORLG00015003435	-	100	87.940	ENSHBUG00000022537	-	93	89.447	Haplochromis_burtoni
ENSORLG00015003435	-	89	78.161	ENSHGLG00000013939	PRDM12	99	72.051	Heterocephalus_glaber_female
ENSORLG00015003435	-	100	73.924	ENSHCOG00000021167	-	100	72.362	Hippocampus_comes
ENSORLG00015003435	-	87	82.029	ENSHCOG00000003663	prdm12b	100	74.372	Hippocampus_comes
ENSORLG00015003435	-	100	72.051	ENSIPUG00000019544	PRDM12	100	72.051	Ictalurus_punctatus
ENSORLG00015003435	-	100	80.256	ENSIPUG00000017053	prdm12b	100	79.231	Ictalurus_punctatus
ENSORLG00015003435	-	87	80.352	ENSSTOG00000005986	PRDM12	85	79.765	Ictidomys_tridecemlineatus
ENSORLG00015003435	-	87	80.059	ENSJJAG00000005424	Prdm12	98	79.765	Jaculus_jaculus
ENSORLG00015003435	-	100	73.659	ENSKMAG00000016921	prdm12b	100	73.594	Kryptolebias_marmoratus
ENSORLG00015003435	-	99	81.818	ENSKMAG00000021205	-	93	82.527	Kryptolebias_marmoratus
ENSORLG00015003435	-	100	87.755	ENSLBEG00000007776	-	100	86.735	Labrus_bergylta
ENSORLG00015003435	-	100	79.082	ENSLBEG00000017769	prdm12b	100	79.082	Labrus_bergylta
ENSORLG00015003435	-	100	76.154	ENSLACG00000017560	PRDM12	99	75.385	Latimeria_chalumnae
ENSORLG00015003435	-	100	79.345	ENSLOCG00000005429	prdm12b	100	77.834	Lepisosteus_oculatus
ENSORLG00015003435	-	87	78.613	ENSLAFG00000006979	PRDM12	88	78.035	Loxodonta_africana
ENSORLG00015003435	-	87	80.059	ENSMFAG00000040322	PRDM12	88	79.472	Macaca_fascicularis
ENSORLG00015003435	-	87	80.059	ENSMNEG00000037234	PRDM12	89	79.472	Macaca_nemestrina
ENSORLG00015003435	-	100	82.544	ENSMAMG00000018988	-	100	84.289	Mastacembelus_armatus
ENSORLG00015003435	-	100	79.389	ENSMAMG00000013212	prdm12b	100	78.880	Mastacembelus_armatus
ENSORLG00015003435	-	100	87.500	ENSMZEG00005000415	PRDM12	100	89.000	Maylandia_zebra
ENSORLG00015003435	-	98	76.042	ENSMGAG00000005438	PRDM12	98	74.219	Meleagris_gallopavo
ENSORLG00015003435	-	100	73.096	ENSMAUG00000013040	Prdm12	99	72.051	Mesocricetus_auratus
ENSORLG00015003435	-	87	80.352	ENSMICG00000015480	PRDM12	90	79.765	Microcebus_murinus
ENSORLG00015003435	-	97	75.132	ENSMOCG00000021026	Prdm12	89	80.059	Microtus_ochrogaster
ENSORLG00015003435	-	100	74.936	ENSMODG00000012108	PRDM12	99	73.657	Monodelphis_domestica
ENSORLG00015003435	-	84	77.508	ENSMALG00000021901	prdm12b	96	76.292	Monopterus_albus
ENSORLG00015003435	-	87	80.352	MGP_CAROLIEiJ_G0023414	Prdm12	99	72.821	Mus_caroli
ENSORLG00015003435	-	87	80.352	ENSMUSG00000079466	Prdm12	99	72.821	Mus_musculus
ENSORLG00015003435	-	87	80.352	MGP_PahariEiJ_G0024871	Prdm12	99	72.821	Mus_pahari
ENSORLG00015003435	-	87	80.352	MGP_SPRETEiJ_G0024331	Prdm12	99	72.821	Mus_spretus
ENSORLG00015003435	-	87	80.352	ENSNGAG00000018480	Prdm12	99	72.051	Nannospalax_galili
ENSORLG00015003435	-	100	78.173	ENSNBRG00000006727	prdm12b	100	77.665	Neolamprologus_brichardi
ENSORLG00015003435	-	100	79.747	ENSNBRG00000024312	-	100	79.747	Neolamprologus_brichardi
ENSORLG00015003435	-	100	67.263	ENSMEUG00000003828	PRDM12	99	65.985	Notamacropus_eugenii
ENSORLG00015003435	-	87	80.059	ENSOPRG00000008680	PRDM12	98	79.472	Ochotona_princeps
ENSORLG00015003435	-	87	79.765	ENSODEG00000016282	PRDM12	61	79.472	Octodon_degus
ENSORLG00015003435	-	64	74.699	ENSOANG00000001043	PRDM12	100	72.691	Ornithorhynchus_anatinus
ENSORLG00015003435	-	81	80.380	ENSOCUG00000008241	PRDM12	96	80.380	Oryctolagus_cuniculus
ENSORLG00015003435	-	100	77.411	ENSORLG00000007114	prdm12b	99	76.650	Oryzias_latipes
ENSORLG00015003435	-	100	99.742	ENSORLG00000017558	-	100	99.742	Oryzias_latipes
ENSORLG00015003435	-	100	99.231	ENSORLG00020013167	-	100	99.231	Oryzias_latipes_hni
ENSORLG00015003435	-	100	77.411	ENSORLG00020019565	prdm12b	99	77.411	Oryzias_latipes_hni
ENSORLG00015003435	-	100	76.382	ENSOMEG00000004134	prdm12b	99	76.010	Oryzias_melastigma
ENSORLG00015003435	-	100	96.447	ENSOMEG00000007762	-	100	96.447	Oryzias_melastigma
ENSORLG00015003435	-	87	80.352	ENSOGAG00000007557	PRDM12	97	79.765	Otolemur_garnettii
ENSORLG00015003435	-	78	77.228	ENSPPAG00000031506	-	99	75.405	Pan_paniscus
ENSORLG00015003435	-	100	67.089	ENSPPRG00000023024	PRDM12	83	72.807	Panthera_pardus
ENSORLG00015003435	-	87	80.059	ENSPTRG00000021475	PRDM12	99	72.051	Pan_troglodytes
ENSORLG00015003435	-	87	80.059	ENSPTRG00000043324	-	99	72.051	Pan_troglodytes
ENSORLG00015003435	-	87	80.059	ENSPANG00000025967	PRDM12	89	79.472	Papio_anubis
ENSORLG00015003435	-	87	78.006	ENSPKIG00000004305	PRDM12	94	76.833	Paramormyrops_kingsleyae
ENSORLG00015003435	-	100	82.051	ENSPKIG00000007228	prdm12b	100	80.769	Paramormyrops_kingsleyae
ENSORLG00015003435	-	100	75.641	ENSPSIG00000006739	PRDM12	99	73.333	Pelodiscus_sinensis
ENSORLG00015003435	-	100	76.154	ENSPMGG00000008867	prdm12b	99	76.471	Periophthalmus_magnuspinnatus
ENSORLG00015003435	-	100	79.259	ENSPMGG00000002356	-	100	78.250	Periophthalmus_magnuspinnatus
ENSORLG00015003435	-	94	76.294	ENSPEMG00000009969	Prdm12	91	78.448	Peromyscus_maniculatus_bairdii
ENSORLG00015003435	-	100	74.936	ENSPCIG00000024119	PRDM12	99	73.657	Phascolarctos_cinereus
ENSORLG00015003435	-	100	76.786	ENSPFOG00000019841	prdm12b	100	76.531	Poecilia_formosa
ENSORLG00015003435	-	100	77.179	ENSPLAG00000016626	prdm12b	99	77.436	Poecilia_latipinna
ENSORLG00015003435	-	95	79.133	ENSPMEG00000016698	prdm12b	97	79.675	Poecilia_mexicana
ENSORLG00015003435	-	96	77.778	ENSPREG00000003211	-	94	77.926	Poecilia_reticulata
ENSORLG00015003435	-	100	77.436	ENSPREG00000015073	prdm12b	99	77.692	Poecilia_reticulata
ENSORLG00015003435	-	87	80.059	ENSPPYG00000019694	PRDM12	92	79.472	Pongo_abelii
ENSORLG00015003435	-	87	80.352	ENSPCOG00000022255	PRDM12	99	72.564	Propithecus_coquereli
ENSORLG00015003435	-	87	80.352	ENSPVAG00000001511	PRDM12	99	72.051	Pteropus_vampyrus
ENSORLG00015003435	-	100	87.750	ENSPNYG00000013589	-	100	89.000	Pundamilia_nyererei
ENSORLG00015003435	-	100	78.880	ENSPNYG00000009607	prdm12b	100	77.863	Pundamilia_nyererei
ENSORLG00015003435	-	100	79.744	ENSPNAG00000024532	prdm12b	100	78.718	Pygocentrus_nattereri
ENSORLG00015003435	-	100	72.890	ENSPNAG00000013396	PRDM12	100	73.214	Pygocentrus_nattereri
ENSORLG00015003435	-	87	80.352	ENSRNOG00000009218	Prdm12	99	72.821	Rattus_norvegicus
ENSORLG00015003435	-	85	79.580	ENSRBIG00000042712	PRDM12	88	78.338	Rhinopithecus_bieti
ENSORLG00015003435	-	86	79.822	ENSRROG00000043554	PRDM12	99	79.228	Rhinopithecus_roxellana
ENSORLG00015003435	-	100	74.490	ENSSHAG00000015972	PRDM12	99	73.214	Sarcophilus_harrisii
ENSORLG00015003435	-	100	75.188	ENSSMAG00000003754	prdm12b	100	74.568	Scophthalmus_maximus
ENSORLG00015003435	-	100	78.055	ENSSDUG00000023498	prdm12b	100	77.057	Seriola_dumerili
ENSORLG00015003435	-	100	87.848	ENSSDUG00000019071	-	100	86.835	Seriola_dumerili
ENSORLG00015003435	-	100	81.330	ENSSLDG00000013562	-	100	81.586	Seriola_lalandi_dorsalis
ENSORLG00015003435	-	100	79.146	ENSSLDG00000009557	prdm12b	100	77.638	Seriola_lalandi_dorsalis
ENSORLG00015003435	-	100	75.641	ENSSPUG00000013424	PRDM12	99	74.359	Sphenodon_punctatus
ENSORLG00015003435	-	100	78.481	ENSSPAG00000018824	prdm12b	100	79.241	Stegastes_partitus
ENSORLG00015003435	-	100	77.525	ENSSPAG00000022420	-	100	78.535	Stegastes_partitus
ENSORLG00015003435	-	87	80.352	ENSSSCG00000005703	PRDM12	89	79.765	Sus_scrofa
ENSORLG00015003435	-	100	81.122	ENSTRUG00000013239	-	100	80.612	Takifugu_rubripes
ENSORLG00015003435	-	100	76.531	ENSTRUG00000018659	prdm12b	100	76.590	Takifugu_rubripes
ENSORLG00015003435	-	100	75.510	ENSTNIG00000009020	prdm12b	99	75.000	Tetraodon_nigroviridis
ENSORLG00015003435	-	100	76.081	ENSTNIG00000005859	-	99	75.573	Tetraodon_nigroviridis
ENSORLG00015003435	-	87	80.352	ENSUAMG00000009653	PRDM12	90	79.765	Ursus_americanus
ENSORLG00015003435	-	87	80.352	ENSVVUG00000027662	PRDM12	77	79.765	Vulpes_vulpes
ENSORLG00015003435	-	100	76.410	ENSXCOG00000002836	prdm12b	99	77.436	Xiphophorus_couchianus
ENSORLG00015003435	-	100	87.250	ENSXMAG00000028012	-	100	87.500	Xiphophorus_maculatus
ENSORLG00015003435	-	100	76.923	ENSXMAG00000005537	prdm12b	100	77.436	Xiphophorus_maculatus