EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015003439 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6087 bases
Position: chr14:18914348-18920434
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002753	Nucleoplasmin	PF03066.15	5.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010436	-	2159	-	ENSORLP00015002753	292 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003439	npm1a	100	74.419	ENSAPOG00000002813	npm1a	100	74.419	Acanthochromis_polyacanthus
ENSORLG00015003439	npm1a	94	71.223	ENSACIG00000014201	npm1a	100	72.792	Amphilophus_citrinellus
ENSORLG00015003439	npm1a	89	68.462	ENSAOCG00000004978	npm1a	100	66.538	Amphiprion_ocellaris
ENSORLG00015003439	npm1a	100	75.503	ENSAPEG00000008594	npm1a	100	75.168	Amphiprion_percula
ENSORLG00015003439	npm1a	99	76.721	ENSATEG00000008885	npm1a	99	76.721	Anabas_testudineus
ENSORLG00015003439	npm1a	97	67.606	ENSACLG00000008376	npm1a	96	67.254	Astatotilapia_calliptera
ENSORLG00015003439	npm1a	99	54.167	ENSAMXG00000010155	npm1a	99	56.207	Astyanax_mexicanus
ENSORLG00015003439	npm1a	100	58.562	ENSCSEG00000011165	npm1a	96	79.739	Cynoglossus_semilaevis
ENSORLG00015003439	npm1a	100	70.805	ENSCVAG00000008960	npm1a	100	70.470	Cyprinodon_variegatus
ENSORLG00015003439	npm1a	98	63.194	ENSDARG00000014329	npm1a	95	69.935	Danio_rerio
ENSORLG00015003439	npm1a	95	34.062	ENSEBUG00000012753	npm1a	91	33.856	Eptatretus_burgeri
ENSORLG00015003439	npm1a	100	68.814	ENSELUG00000013705	npm1a	100	68.814	Esox_lucius
ENSORLG00015003439	npm1a	100	73.841	ENSFHEG00000012496	npm1a	100	74.172	Fundulus_heteroclitus
ENSORLG00015003439	npm1a	100	68.647	ENSGAFG00000013059	npm1a	100	68.317	Gambusia_affinis
ENSORLG00015003439	npm1a	99	67.241	ENSGACG00000020319	npm1a	99	65.517	Gasterosteus_aculeatus
ENSORLG00015003439	npm1a	99	67.722	ENSHBUG00000000776	npm1a	100	71.203	Haplochromis_burtoni
ENSORLG00015003439	npm1a	100	53.595	ENSHCOG00000001059	npm1a	98	54.305	Hippocampus_comes
ENSORLG00015003439	npm1a	98	59.459	ENSIPUG00000019452	npm1	99	58.784	Ictalurus_punctatus
ENSORLG00015003439	npm1a	100	75.593	ENSKMAG00000010709	npm1a	100	75.932	Kryptolebias_marmoratus
ENSORLG00015003439	npm1a	100	71.906	ENSLBEG00000008793	npm1a	100	71.906	Labrus_bergylta
ENSORLG00015003439	npm1a	85	58.052	ENSLOCG00000009683	npm1a	100	56.877	Lepisosteus_oculatus
ENSORLG00015003439	npm1a	100	77.027	ENSMAMG00000009344	npm1a	83	76.351	Mastacembelus_armatus
ENSORLG00015003439	npm1a	99	69.745	ENSMZEG00005013717	npm1a	100	68.153	Maylandia_zebra
ENSORLG00015003439	npm1a	95	74.101	ENSMMOG00000007980	npm1a	100	73.741	Mola_mola
ENSORLG00015003439	npm1a	100	70.432	ENSMALG00000001146	npm1a	100	72.093	Monopterus_albus
ENSORLG00015003439	npm1a	99	64.669	ENSNBRG00000013172	npm1a	100	64.984	Neolamprologus_brichardi
ENSORLG00015003439	npm1a	99	69.307	ENSONIG00000001860	npm1a	99	68.977	Oreochromis_niloticus
ENSORLG00015003439	npm1a	100	99.658	ENSORLG00000010179	npm1a	100	99.658	Oryzias_latipes
ENSORLG00015003439	npm1a	100	98.630	ENSORLG00020020817	npm1a	100	98.630	Oryzias_latipes_hni
ENSORLG00015003439	npm1a	100	88.055	ENSOMEG00000007083	npm1a	100	88.055	Oryzias_melastigma
ENSORLG00015003439	npm1a	100	55.738	ENSPKIG00000023943	npm1a	100	56.066	Paramormyrops_kingsleyae
ENSORLG00015003439	npm1a	100	54.698	ENSPMGG00000011716	npm1a	100	56.040	Periophthalmus_magnuspinnatus
ENSORLG00015003439	npm1a	100	67.110	ENSPFOG00000019173	npm1a	100	67.774	Poecilia_formosa
ENSORLG00015003439	npm1a	100	66.667	ENSPLAG00000001093	npm1a	100	66.337	Poecilia_latipinna
ENSORLG00015003439	npm1a	100	67.110	ENSPMEG00000012523	npm1a	100	67.774	Poecilia_mexicana
ENSORLG00015003439	npm1a	100	68.333	ENSPREG00000001647	npm1a	100	68.000	Poecilia_reticulata
ENSORLG00015003439	npm1a	99	67.846	ENSPNYG00000019321	npm1a	100	71.383	Pundamilia_nyererei
ENSORLG00015003439	npm1a	99	58.108	ENSPNAG00000026891	npm1a	99	58.983	Pygocentrus_nattereri
ENSORLG00015003439	npm1a	100	61.616	ENSSFOG00015007074	npm1a	100	61.616	Scleropages_formosus
ENSORLG00015003439	npm1a	100	73.064	ENSSMAG00000019090	npm1a	100	73.401	Scophthalmus_maximus
ENSORLG00015003439	npm1a	100	75.503	ENSSDUG00000015609	npm1a	100	75.839	Seriola_dumerili
ENSORLG00015003439	npm1a	100	74.747	ENSSLDG00000017849	npm1a	100	75.758	Seriola_lalandi_dorsalis
ENSORLG00015003439	npm1a	100	62.457	ENSSPAG00000021660	npm1a	94	54.671	Stegastes_partitus
ENSORLG00015003439	npm1a	100	72.517	ENSTRUG00000024003	npm1a	100	72.517	Takifugu_rubripes
ENSORLG00015003439	npm1a	100	69.153	ENSTNIG00000010773	npm1a	100	69.492	Tetraodon_nigroviridis
ENSORLG00015003439	npm1a	99	63.265	ENSXCOG00000005958	npm1a	100	65.965	Xiphophorus_couchianus
ENSORLG00015003439	npm1a	100	68.750	ENSXMAG00000000396	npm1a	100	68.421	Xiphophorus_maculatus