EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015003457 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: -
Full Name: polymerase (RNA) II (DNA directed) polypeptide J
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 1396 bases
Position: chr5:19136162-19137557
Accession: ZDB-GENE-050522-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015002766	RNA_pol_L_2	PF13656.6	6.6e-29	1	1
ENSORLP00015002766	RNA_pol_L	PF01193.24	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010419	-	754	-	ENSORLP00015002766	141 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015003457	polr2j	76	32.456	ENSORLG00015013267	polr1d	54	32.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003457	polr2j	83	94.872	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSORLG00015003457	polr2j	76	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSORLG00015003457	polr2j	83	100.000	ENSAPOG00000019538	polr2j	100	100.000	Acanthochromis_polyacanthus
ENSORLG00015003457	polr2j	83	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSORLG00015003457	polr2j	77	77.273	ENSACIG00000014549	POLR2J2	91	77.273	Amphilophus_citrinellus
ENSORLG00015003457	polr2j	83	99.145	ENSAOCG00000006937	polr2j	100	99.145	Amphiprion_ocellaris
ENSORLG00015003457	polr2j	83	100.000	ENSAPEG00000021761	polr2j	100	100.000	Amphiprion_percula
ENSORLG00015003457	polr2j	83	100.000	ENSATEG00000009731	polr2j	100	100.000	Anabas_testudineus
ENSORLG00015003457	polr2j	83	100.000	ENSATEG00000013312	-	100	100.000	Anabas_testudineus
ENSORLG00015003457	polr2j	72	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSORLG00015003457	polr2j	83	87.179	ENSACAG00000000251	POLR2J	100	87.179	Anolis_carolinensis
ENSORLG00015003457	polr2j	83	100.000	ENSACLG00000014564	polr2j	100	100.000	Astatotilapia_calliptera
ENSORLG00015003457	polr2j	83	97.436	ENSAMXG00000007517	polr2j	100	97.436	Astyanax_mexicanus
ENSORLG00015003457	polr2j	52	63.014	ENSBTAG00000048046	-	61	63.014	Bos_taurus
ENSORLG00015003457	polr2j	78	68.182	WBGene00012187	rpb-11	89	68.182	Caenorhabditis_elegans
ENSORLG00015003457	polr2j	83	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSORLG00015003457	polr2j	83	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSORLG00015003457	polr2j	70	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSORLG00015003457	polr2j	83	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSORLG00015003457	polr2j	83	73.504	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSORLG00015003457	polr2j	83	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSORLG00015003457	polr2j	83	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSORLG00015003457	polr2j	83	82.051	ENSCING00000020531	-	100	82.051	Ciona_intestinalis
ENSORLG00015003457	polr2j	83	80.342	ENSCSAVG00000006948	-	100	80.342	Ciona_savignyi
ENSORLG00015003457	polr2j	83	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSORLG00015003457	polr2j	83	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSORLG00015003457	polr2j	83	97.436	ENSCSEG00000020352	polr2j	100	97.436	Cynoglossus_semilaevis
ENSORLG00015003457	polr2j	83	99.145	ENSCVAG00000014267	polr2j	100	99.145	Cyprinodon_variegatus
ENSORLG00015003457	polr2j	83	96.581	ENSDARG00000035146	polr2j	100	96.581	Danio_rerio
ENSORLG00015003457	polr2j	83	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSORLG00015003457	polr2j	82	79.130	FBgn0032634	Rpb11	98	79.130	Drosophila_melanogaster
ENSORLG00015003457	polr2j	83	64.957	ENSEBUG00000016100	polr2j	100	64.957	Eptatretus_burgeri
ENSORLG00015003457	polr2j	83	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSORLG00015003457	polr2j	83	97.436	ENSELUG00000012822	polr2j	100	97.436	Esox_lucius
ENSORLG00015003457	polr2j	83	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSORLG00015003457	polr2j	83	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSORLG00015003457	polr2j	83	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSORLG00015003457	polr2j	83	100.000	ENSFHEG00000006625	polr2j	100	100.000	Fundulus_heteroclitus
ENSORLG00015003457	polr2j	83	97.436	ENSGMOG00000018207	polr2j	100	97.436	Gadus_morhua
ENSORLG00015003457	polr2j	83	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSORLG00015003457	polr2j	83	100.000	ENSGAFG00000019555	polr2j	100	100.000	Gambusia_affinis
ENSORLG00015003457	polr2j	83	100.000	ENSGACG00000003310	polr2j	100	100.000	Gasterosteus_aculeatus
ENSORLG00015003457	polr2j	80	84.956	ENSGAGG00000018304	-	96	84.956	Gopherus_agassizii
ENSORLG00015003457	polr2j	84	78.992	ENSGGOG00000004519	-	93	78.992	Gorilla_gorilla
ENSORLG00015003457	polr2j	83	100.000	ENSHBUG00000008467	polr2j	100	100.000	Haplochromis_burtoni
ENSORLG00015003457	polr2j	83	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSORLG00015003457	polr2j	83	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSORLG00015003457	polr2j	83	97.436	ENSHCOG00000014827	polr2j	68	97.436	Hippocampus_comes
ENSORLG00015003457	polr2j	83	97.436	ENSIPUG00000023960	polr2j	100	97.436	Ictalurus_punctatus
ENSORLG00015003457	polr2j	83	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSORLG00015003457	polr2j	83	94.872	ENSJJAG00000013854	-	100	94.872	Jaculus_jaculus
ENSORLG00015003457	polr2j	83	89.744	ENSJJAG00000018834	-	100	89.744	Jaculus_jaculus
ENSORLG00015003457	polr2j	99	89.209	ENSKMAG00000014581	polr2j	90	89.209	Kryptolebias_marmoratus
ENSORLG00015003457	polr2j	83	99.145	ENSLBEG00000005885	polr2j	100	99.145	Labrus_bergylta
ENSORLG00015003457	polr2j	84	97.458	ENSLOCG00000001885	polr2j	89	97.458	Lepisosteus_oculatus
ENSORLG00015003457	polr2j	83	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSORLG00015003457	polr2j	83	85.385	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSORLG00015003457	polr2j	83	99.145	ENSMAMG00000009374	polr2j	100	99.145	Mastacembelus_armatus
ENSORLG00015003457	polr2j	83	100.000	ENSMZEG00005011932	polr2j	100	100.000	Maylandia_zebra
ENSORLG00015003457	polr2j	83	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSORLG00015003457	polr2j	83	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSORLG00015003457	polr2j	67	89.362	ENSMICG00000026811	-	94	89.362	Microcebus_murinus
ENSORLG00015003457	polr2j	83	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSORLG00015003457	polr2j	83	98.291	ENSMMOG00000013265	polr2j	100	98.291	Mola_mola
ENSORLG00015003457	polr2j	83	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSORLG00015003457	polr2j	83	99.145	ENSMALG00000020749	polr2j	100	99.145	Monopterus_albus
ENSORLG00015003457	polr2j	83	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSORLG00015003457	polr2j	83	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSORLG00015003457	polr2j	83	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSORLG00015003457	polr2j	83	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSORLG00015003457	polr2j	83	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSORLG00015003457	polr2j	83	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSORLG00015003457	polr2j	55	97.403	ENSNBRG00000006580	polr2j	59	97.403	Neolamprologus_brichardi
ENSORLG00015003457	polr2j	83	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSORLG00015003457	polr2j	83	73.504	ENSODEG00000008559	-	100	73.504	Octodon_degus
ENSORLG00015003457	polr2j	83	100.000	ENSONIG00000000259	polr2j	100	100.000	Oreochromis_niloticus
ENSORLG00015003457	polr2j	83	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSORLG00015003457	polr2j	83	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSORLG00015003457	polr2j	100	99.291	ENSORLG00000029046	polr2j	100	99.291	Oryzias_latipes
ENSORLG00015003457	polr2j	100	98.582	ENSORLG00020007625	polr2j	100	98.582	Oryzias_latipes_hni
ENSORLG00015003457	polr2j	83	99.145	ENSOMEG00000002097	polr2j	100	99.145	Oryzias_melastigma
ENSORLG00015003457	polr2j	83	71.875	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSORLG00015003457	polr2j	84	93.277	ENSOARG00000014204	-	99	93.277	Ovis_aries
ENSORLG00015003457	polr2j	83	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSORLG00015003457	polr2j	81	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSORLG00015003457	polr2j	71	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSORLG00015003457	polr2j	83	100.000	ENSPMGG00000021256	polr2j	100	100.000	Periophthalmus_magnuspinnatus
ENSORLG00015003457	polr2j	83	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSORLG00015003457	polr2j	83	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSORLG00015003457	polr2j	84	100.000	ENSPFOG00000012001	polr2j	100	100.000	Poecilia_formosa
ENSORLG00015003457	polr2j	83	100.000	ENSPLAG00000014075	polr2j	100	100.000	Poecilia_latipinna
ENSORLG00015003457	polr2j	83	100.000	ENSPMEG00000020585	polr2j	100	100.000	Poecilia_mexicana
ENSORLG00015003457	polr2j	83	100.000	ENSPREG00000015255	polr2j	100	100.000	Poecilia_reticulata
ENSORLG00015003457	polr2j	83	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSORLG00015003457	polr2j	96	80.147	ENSPVAG00000017770	-	75	80.147	Pteropus_vampyrus
ENSORLG00015003457	polr2j	83	100.000	ENSPNYG00000014832	polr2j	100	100.000	Pundamilia_nyererei
ENSORLG00015003457	polr2j	83	94.872	ENSPNAG00000016595	polr2j	100	94.872	Pygocentrus_nattereri
ENSORLG00015003457	polr2j	83	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSORLG00015003457	polr2j	83	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSORLG00015003457	polr2j	77	95.413	ENSSFOG00015003371	polr2j	83	95.413	Scleropages_formosus
ENSORLG00015003457	polr2j	83	100.000	ENSSMAG00000006729	polr2j	100	100.000	Scophthalmus_maximus
ENSORLG00015003457	polr2j	83	100.000	ENSSDUG00000018490	polr2j	100	100.000	Seriola_dumerili
ENSORLG00015003457	polr2j	83	100.000	ENSSLDG00000022354	polr2j	100	100.000	Seriola_lalandi_dorsalis
ENSORLG00015003457	polr2j	83	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSORLG00015003457	polr2j	83	100.000	ENSSPAG00000021953	polr2j	100	100.000	Stegastes_partitus
ENSORLG00015003457	polr2j	83	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSORLG00015003457	polr2j	83	78.632	ENSSSCG00000003703	-	83	78.632	Sus_scrofa
ENSORLG00015003457	polr2j	71	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSORLG00015003457	polr2j	83	99.145	ENSTRUG00000020842	polr2j	100	99.145	Takifugu_rubripes
ENSORLG00015003457	polr2j	83	98.291	ENSTNIG00000002994	polr2j	100	98.291	Tetraodon_nigroviridis
ENSORLG00015003457	polr2j	77	78.704	ENSTBEG00000005797	-	71	78.704	Tupaia_belangeri
ENSORLG00015003457	polr2j	83	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSORLG00015003457	polr2j	83	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSORLG00015003457	polr2j	83	94.017	ENSXETG00000001108	polr2j	100	94.017	Xenopus_tropicalis
ENSORLG00015003457	polr2j	83	100.000	ENSXMAG00000012422	polr2j	100	100.000	Xiphophorus_maculatus