EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015003551 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: -
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 12082 bases
Position: chr3:22736822-22748903
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023497	Suf	PF05843.14	1.7e-84	1	1
ENSORLP00015023502	Suf	PF05843.14	3.2e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010314	-	2112	-	ENSORLP00015023502	703 (aa)	-	-
ENSORLT00015010338	-	2776	-	ENSORLP00015023497	714 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003551	cstf3	100	90.795	ENSG00000176102	CSTF3	100	90.795	Homo_sapiens
ENSORLG00015003551	cstf3	100	95.950	ENSAPOG00000014054	cstf3	100	95.950	Acanthochromis_polyacanthus
ENSORLG00015003551	cstf3	99	90.832	ENSAMEG00000007187	CSTF3	98	90.832	Ailuropoda_melanoleuca
ENSORLG00015003551	cstf3	89	91.653	ENSACIG00000005539	cstf3	100	91.653	Amphilophus_citrinellus
ENSORLG00015003551	cstf3	100	95.950	ENSAOCG00000010930	cstf3	100	95.950	Amphiprion_ocellaris
ENSORLG00015003551	cstf3	100	95.950	ENSAPEG00000007903	cstf3	100	95.950	Amphiprion_percula
ENSORLG00015003551	cstf3	100	95.810	ENSATEG00000000190	cstf3	100	95.810	Anabas_testudineus
ENSORLG00015003551	cstf3	99	91.089	ENSAPLG00000007217	CSTF3	99	91.089	Anas_platyrhynchos
ENSORLG00015003551	cstf3	99	90.616	ENSACAG00000002823	CSTF3	99	90.616	Anolis_carolinensis
ENSORLG00015003551	cstf3	100	90.795	ENSANAG00000020699	CSTF3	96	95.227	Aotus_nancymaae
ENSORLG00015003551	cstf3	100	95.950	ENSACLG00000007820	cstf3	100	95.950	Astatotilapia_calliptera
ENSORLG00015003551	cstf3	100	90.098	ENSAMXG00000014198	cstf3	100	90.377	Astyanax_mexicanus
ENSORLG00015003551	cstf3	100	90.795	ENSBTAG00000008617	CSTF3	100	90.950	Bos_taurus
ENSORLG00015003551	cstf3	97	47.709	WBGene00006307	suf-1	99	47.709	Caenorhabditis_elegans
ENSORLG00015003551	cstf3	100	90.795	ENSCJAG00000005533	CSTF3	100	90.795	Callithrix_jacchus
ENSORLG00015003551	cstf3	100	90.795	ENSCAFG00000007264	CSTF3	100	90.795	Canis_familiaris
ENSORLG00015003551	cstf3	99	91.092	ENSCAFG00020002715	CSTF3	99	91.092	Canis_lupus_dingo
ENSORLG00015003551	cstf3	98	91.185	ENSCHIG00000016418	CSTF3	100	91.185	Capra_hircus
ENSORLG00015003551	cstf3	99	90.973	ENSTSYG00000000451	CSTF3	99	95.333	Carlito_syrichta
ENSORLG00015003551	cstf3	83	90.049	ENSCAPG00000010958	CSTF3	98	90.049	Cavia_aperea
ENSORLG00015003551	cstf3	100	90.934	ENSCPOG00000005545	CSTF3	100	90.934	Cavia_porcellus
ENSORLG00015003551	cstf3	100	90.795	ENSCCAG00000024790	CSTF3	96	95.333	Cebus_capucinus
ENSORLG00015003551	cstf3	100	90.795	ENSCATG00000007080	CSTF3	100	90.795	Cercocebus_atys
ENSORLG00015003551	cstf3	100	90.795	ENSCLAG00000016179	CSTF3	100	90.795	Chinchilla_lanigera
ENSORLG00015003551	cstf3	78	96.604	ENSCHOG00000002497	CSTF3	79	96.604	Choloepus_hoffmanni
ENSORLG00015003551	cstf3	100	90.808	ENSCPBG00000006753	CSTF3	100	90.808	Chrysemys_picta_bellii
ENSORLG00015003551	cstf3	99	61.602	ENSCING00000006401	-	98	61.878	Ciona_intestinalis
ENSORLG00015003551	cstf3	99	61.885	ENSCSAVG00000004851	-	100	61.885	Ciona_savignyi
ENSORLG00015003551	cstf3	100	90.795	ENSCANG00000035468	CSTF3	100	90.795	Colobus_angolensis_palliatus
ENSORLG00015003551	cstf3	100	90.516	ENSCGRG00001014773	Cstf3	100	90.516	Cricetulus_griseus_chok1gshd
ENSORLG00015003551	cstf3	100	90.516	ENSCGRG00000004142	Cstf3	100	90.516	Cricetulus_griseus_crigri
ENSORLG00015003551	cstf3	100	95.385	ENSCSEG00000014283	cstf3	100	95.385	Cynoglossus_semilaevis
ENSORLG00015003551	cstf3	100	95.112	ENSCVAG00000019739	cstf3	100	95.112	Cyprinodon_variegatus
ENSORLG00015003551	cstf3	100	92.039	ENSDARG00000018904	cstf3	100	92.039	Danio_rerio
ENSORLG00015003551	cstf3	99	90.832	ENSDNOG00000007366	CSTF3	99	90.832	Dasypus_novemcinctus
ENSORLG00015003551	cstf3	99	83.475	ENSDORG00000005898	Cstf3	100	83.077	Dipodomys_ordii
ENSORLG00015003551	cstf3	98	56.111	FBgn0003559	su(f)	98	56.111	Drosophila_melanogaster
ENSORLG00015003551	cstf3	90	85.514	ENSETEG00000017097	CSTF3	90	85.514	Echinops_telfairi
ENSORLG00015003551	cstf3	84	75.507	ENSEBUG00000015459	cstf3	96	75.507	Eptatretus_burgeri
ENSORLG00015003551	cstf3	98	91.286	ENSEASG00005019884	CSTF3	97	95.333	Equus_asinus_asinus
ENSORLG00015003551	cstf3	98	91.286	ENSECAG00000023338	CSTF3	97	95.333	Equus_caballus
ENSORLG00015003551	cstf3	100	85.914	ENSEEUG00000015167	CSTF3	100	85.914	Erinaceus_europaeus
ENSORLG00015003551	cstf3	100	93.575	ENSELUG00000023393	cstf3	100	93.575	Esox_lucius
ENSORLG00015003551	cstf3	100	90.656	ENSFCAG00000030711	CSTF3	100	90.656	Felis_catus
ENSORLG00015003551	cstf3	93	92.922	ENSFALG00000010764	CSTF3	100	90.169	Ficedula_albicollis
ENSORLG00015003551	cstf3	100	90.656	ENSFDAG00000012082	CSTF3	100	90.656	Fukomys_damarensis
ENSORLG00015003551	cstf3	100	95.531	ENSFHEG00000020623	cstf3	100	95.531	Fundulus_heteroclitus
ENSORLG00015003551	cstf3	100	92.618	ENSGMOG00000012275	cstf3	100	92.618	Gadus_morhua
ENSORLG00015003551	cstf3	100	90.111	ENSGALG00000011685	CSTF3	100	90.111	Gallus_gallus
ENSORLG00015003551	cstf3	100	95.251	ENSGAFG00000002181	cstf3	100	95.251	Gambusia_affinis
ENSORLG00015003551	cstf3	100	94.832	ENSGACG00000015997	cstf3	100	94.832	Gasterosteus_aculeatus
ENSORLG00015003551	cstf3	100	90.808	ENSGAGG00000006200	CSTF3	100	90.808	Gopherus_agassizii
ENSORLG00015003551	cstf3	99	86.695	ENSGGOG00000026591	CSTF3	96	92.727	Gorilla_gorilla
ENSORLG00015003551	cstf3	100	95.810	ENSHBUG00000016656	cstf3	100	95.810	Haplochromis_burtoni
ENSORLG00015003551	cstf3	100	90.795	ENSHGLG00000017834	CSTF3	100	90.795	Heterocephalus_glaber_female
ENSORLG00015003551	cstf3	100	90.795	ENSHGLG00100018042	CSTF3	100	90.795	Heterocephalus_glaber_male
ENSORLG00015003551	cstf3	99	93.571	ENSHCOG00000015218	cstf3	100	92.318	Hippocampus_comes
ENSORLG00015003551	cstf3	100	91.620	ENSIPUG00000013170	CSTF3	100	91.620	Ictalurus_punctatus
ENSORLG00015003551	cstf3	100	90.795	ENSSTOG00000013306	CSTF3	100	90.795	Ictidomys_tridecemlineatus
ENSORLG00015003551	cstf3	99	80.169	ENSJJAG00000018430	Cstf3	99	80.169	Jaculus_jaculus
ENSORLG00015003551	cstf3	100	94.832	ENSKMAG00000010916	cstf3	100	94.832	Kryptolebias_marmoratus
ENSORLG00015003551	cstf3	100	94.693	ENSLBEG00000002306	cstf3	100	94.693	Labrus_bergylta
ENSORLG00015003551	cstf3	100	88.966	ENSLACG00000017296	CSTF3	100	88.966	Latimeria_chalumnae
ENSORLG00015003551	cstf3	100	92.608	ENSLOCG00000004415	cstf3	100	92.608	Lepisosteus_oculatus
ENSORLG00015003551	cstf3	100	90.656	ENSLAFG00000008712	CSTF3	100	90.656	Loxodonta_africana
ENSORLG00015003551	cstf3	100	90.795	ENSMFAG00000029516	CSTF3	100	90.795	Macaca_fascicularis
ENSORLG00015003551	cstf3	100	90.795	ENSMMUG00000002542	CSTF3	100	90.795	Macaca_mulatta
ENSORLG00015003551	cstf3	100	90.795	ENSMNEG00000021807	CSTF3	100	90.795	Macaca_nemestrina
ENSORLG00015003551	cstf3	100	90.795	ENSMLEG00000039594	CSTF3	98	92.905	Mandrillus_leucophaeus
ENSORLG00015003551	cstf3	100	95.531	ENSMAMG00000020423	cstf3	100	95.531	Mastacembelus_armatus
ENSORLG00015003551	cstf3	100	95.950	ENSMZEG00005012082	cstf3	100	95.950	Maylandia_zebra
ENSORLG00015003551	cstf3	99	90.603	ENSMGAG00000001383	CSTF3	99	90.603	Meleagris_gallopavo
ENSORLG00015003551	cstf3	100	90.377	ENSMAUG00000002487	Cstf3	100	90.377	Mesocricetus_auratus
ENSORLG00015003551	cstf3	100	90.516	ENSMICG00000004784	CSTF3	100	90.516	Microcebus_murinus
ENSORLG00015003551	cstf3	100	90.516	ENSMOCG00000017583	Cstf3	100	90.516	Microtus_ochrogaster
ENSORLG00015003551	cstf3	99	96.028	ENSMMOG00000016026	cstf3	94	96.028	Mola_mola
ENSORLG00015003551	cstf3	100	80.335	ENSMODG00000025205	-	100	80.335	Monodelphis_domestica
ENSORLG00015003551	cstf3	100	91.213	ENSMODG00000009745	-	100	91.213	Monodelphis_domestica
ENSORLG00015003551	cstf3	100	95.531	ENSMALG00000012050	cstf3	100	95.531	Monopterus_albus
ENSORLG00015003551	cstf3	100	90.516	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.516	Mus_caroli
ENSORLG00015003551	cstf3	100	90.516	ENSMUSG00000027176	Cstf3	100	90.516	Mus_musculus
ENSORLG00015003551	cstf3	100	90.516	MGP_PahariEiJ_G0025464	Cstf3	100	90.516	Mus_pahari
ENSORLG00015003551	cstf3	100	90.516	MGP_SPRETEiJ_G0024939	Cstf3	100	90.516	Mus_spretus
ENSORLG00015003551	cstf3	100	90.656	ENSMPUG00000011457	CSTF3	100	90.656	Mustela_putorius_furo
ENSORLG00015003551	cstf3	100	88.006	ENSMLUG00000026022	-	100	88.006	Myotis_lucifugus
ENSORLG00015003551	cstf3	99	90.717	ENSMLUG00000003073	-	99	90.717	Myotis_lucifugus
ENSORLG00015003551	cstf3	100	90.656	ENSNGAG00000010677	Cstf3	100	90.656	Nannospalax_galili
ENSORLG00015003551	cstf3	89	96.469	ENSNBRG00000007345	cstf3	100	96.469	Neolamprologus_brichardi
ENSORLG00015003551	cstf3	100	90.795	ENSNLEG00000017901	CSTF3	97	95.227	Nomascus_leucogenys
ENSORLG00015003551	cstf3	73	90.249	ENSMEUG00000005640	-	100	90.249	Notamacropus_eugenii
ENSORLG00015003551	cstf3	67	91.304	ENSOPRG00000000199	-	67	90.667	Ochotona_princeps
ENSORLG00015003551	cstf3	100	90.516	ENSODEG00000016737	-	100	90.516	Octodon_degus
ENSORLG00015003551	cstf3	99	73.994	ENSODEG00000006311	-	97	78.931	Octodon_degus
ENSORLG00015003551	cstf3	100	95.950	ENSONIG00000005563	cstf3	100	95.950	Oreochromis_niloticus
ENSORLG00015003551	cstf3	90	90.063	ENSOANG00000015140	CSTF3	100	89.846	Ornithorhynchus_anatinus
ENSORLG00015003551	cstf3	100	90.516	ENSOCUG00000015417	CSTF3	100	90.516	Oryctolagus_cuniculus
ENSORLG00015003551	cstf3	100	99.720	ENSORLG00000009762	cstf3	100	99.720	Oryzias_latipes
ENSORLG00015003551	cstf3	100	99.860	ENSORLG00020005540	cstf3	100	99.860	Oryzias_latipes_hni
ENSORLG00015003551	cstf3	100	98.039	ENSOMEG00000003848	cstf3	100	98.039	Oryzias_melastigma
ENSORLG00015003551	cstf3	100	90.417	ENSOGAG00000010229	CSTF3	100	90.417	Otolemur_garnettii
ENSORLG00015003551	cstf3	90	90.669	ENSOARG00000017271	CSTF3	99	90.669	Ovis_aries
ENSORLG00015003551	cstf3	99	88.984	ENSPPAG00000027358	CSTF3	99	88.984	Pan_paniscus
ENSORLG00015003551	cstf3	100	90.656	ENSPPRG00000016852	CSTF3	100	90.656	Panthera_pardus
ENSORLG00015003551	cstf3	100	90.656	ENSPTIG00000008716	CSTF3	100	90.656	Panthera_tigris_altaica
ENSORLG00015003551	cstf3	100	90.795	ENSPTRG00000003485	CSTF3	100	90.795	Pan_troglodytes
ENSORLG00015003551	cstf3	100	90.795	ENSPANG00000013722	CSTF3	98	92.905	Papio_anubis
ENSORLG00015003551	cstf3	100	92.179	ENSPKIG00000023648	cstf3	100	92.179	Paramormyrops_kingsleyae
ENSORLG00015003551	cstf3	100	90.947	ENSPSIG00000009173	CSTF3	100	90.947	Pelodiscus_sinensis
ENSORLG00015003551	cstf3	76	95.978	ENSPMGG00000000164	cstf3	99	95.978	Periophthalmus_magnuspinnatus
ENSORLG00015003551	cstf3	100	90.516	ENSPEMG00000011481	Cstf3	100	90.516	Peromyscus_maniculatus_bairdii
ENSORLG00015003551	cstf3	99	79.237	ENSPMAG00000007282	cstf3	98	79.549	Petromyzon_marinus
ENSORLG00015003551	cstf3	100	76.462	ENSPCIG00000030419	-	90	76.741	Phascolarctos_cinereus
ENSORLG00015003551	cstf3	99	89.689	ENSPCIG00000026406	-	100	91.200	Phascolarctos_cinereus
ENSORLG00015003551	cstf3	100	95.251	ENSPFOG00000017239	cstf3	100	95.251	Poecilia_formosa
ENSORLG00015003551	cstf3	100	95.391	ENSPLAG00000009456	cstf3	100	95.391	Poecilia_latipinna
ENSORLG00015003551	cstf3	100	95.251	ENSPMEG00000010320	cstf3	100	95.251	Poecilia_mexicana
ENSORLG00015003551	cstf3	100	95.112	ENSPREG00000013549	cstf3	100	95.112	Poecilia_reticulata
ENSORLG00015003551	cstf3	100	90.795	ENSPPYG00000003375	CSTF3	100	90.795	Pongo_abelii
ENSORLG00015003551	cstf3	71	94.425	ENSPCAG00000008025	-	71	94.425	Procavia_capensis
ENSORLG00015003551	cstf3	99	87.356	ENSPCOG00000014417	CSTF3	99	87.356	Propithecus_coquereli
ENSORLG00015003551	cstf3	100	85.495	ENSPVAG00000002350	CSTF3	100	85.495	Pteropus_vampyrus
ENSORLG00015003551	cstf3	100	95.810	ENSPNYG00000018259	cstf3	100	95.810	Pundamilia_nyererei
ENSORLG00015003551	cstf3	100	92.039	ENSPNAG00000020182	cstf3	100	92.039	Pygocentrus_nattereri
ENSORLG00015003551	cstf3	89	89.920	ENSRNOG00000012089	Cstf3	100	89.920	Rattus_norvegicus
ENSORLG00015003551	cstf3	99	89.563	ENSRBIG00000044258	CSTF3	100	90.560	Rhinopithecus_bieti
ENSORLG00015003551	cstf3	100	90.795	ENSRROG00000043450	CSTF3	100	90.795	Rhinopithecus_roxellana
ENSORLG00015003551	cstf3	100	90.795	ENSSBOG00000024764	CSTF3	98	95.333	Saimiri_boliviensis_boliviensis
ENSORLG00015003551	cstf3	99	91.268	ENSSHAG00000018128	-	99	91.268	Sarcophilus_harrisii
ENSORLG00015003551	cstf3	100	81.172	ENSSHAG00000003135	-	99	81.172	Sarcophilus_harrisii
ENSORLG00015003551	cstf3	100	93.017	ENSSFOG00015022133	cstf3	100	93.017	Scleropages_formosus
ENSORLG00015003551	cstf3	100	94.553	ENSSMAG00000002197	cstf3	100	94.553	Scophthalmus_maximus
ENSORLG00015003551	cstf3	100	96.089	ENSSDUG00000020426	cstf3	100	96.089	Seriola_dumerili
ENSORLG00015003551	cstf3	100	96.229	ENSSLDG00000025649	cstf3	100	96.229	Seriola_lalandi_dorsalis
ENSORLG00015003551	cstf3	100	90.656	ENSSARG00000000391	CSTF3	100	90.656	Sorex_araneus
ENSORLG00015003551	cstf3	96	90.738	ENSSPUG00000010546	CSTF3	100	90.738	Sphenodon_punctatus
ENSORLG00015003551	cstf3	100	95.810	ENSSPAG00000004958	cstf3	100	95.810	Stegastes_partitus
ENSORLG00015003551	cstf3	99	90.629	ENSSSCG00000040954	CSTF3	99	90.629	Sus_scrofa
ENSORLG00015003551	cstf3	99	91.231	ENSTGUG00000005010	CSTF3	99	91.231	Taeniopygia_guttata
ENSORLG00015003551	cstf3	100	93.715	ENSTRUG00000004959	cstf3	100	93.715	Takifugu_rubripes
ENSORLG00015003551	cstf3	99	95.177	ENSTNIG00000013811	cstf3	98	95.177	Tetraodon_nigroviridis
ENSORLG00015003551	cstf3	90	88.006	ENSTBEG00000001544	CSTF3	90	88.006	Tupaia_belangeri
ENSORLG00015003551	cstf3	100	88.145	ENSTTRG00000016366	CSTF3	100	88.145	Tursiops_truncatus
ENSORLG00015003551	cstf3	99	90.832	ENSUMAG00000018971	CSTF3	100	90.400	Ursus_maritimus
ENSORLG00015003551	cstf3	100	90.656	ENSVPAG00000007800	CSTF3	100	90.656	Vicugna_pacos
ENSORLG00015003551	cstf3	99	91.092	ENSVVUG00000014938	CSTF3	100	90.560	Vulpes_vulpes
ENSORLG00015003551	cstf3	88	74.375	ENSXETG00000021399	cstf3	100	75.728	Xenopus_tropicalis
ENSORLG00015003551	cstf3	66	41.250	ENSXETG00000017946	-	99	41.250	Xenopus_tropicalis
ENSORLG00015003551	cstf3	89	95.345	ENSXCOG00000011741	cstf3	100	95.345	Xiphophorus_couchianus
ENSORLG00015003551	cstf3	100	95.670	ENSXMAG00000009545	cstf3	100	95.670	Xiphophorus_maculatus