EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015003698 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 3238 bases
Position: chr10:19291103-19294340
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023614	Sua5_yciO_yrdC	PF01300.18	1.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015010046	-	2508	-	ENSORLP00015023614	836 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003698	si:ch211-153b23.3	100	70.877	ENSACIG00000006968	si:ch211-153b23.3	97	70.877	Amphilophus_citrinellus
ENSORLG00015003698	si:ch211-153b23.3	100	82.305	ENSAOCG00000010974	si:ch211-153b23.3	97	82.305	Amphiprion_ocellaris
ENSORLG00015003698	si:ch211-153b23.3	100	81.956	ENSAPEG00000014700	si:ch211-153b23.3	97	81.956	Amphiprion_percula
ENSORLG00015003698	si:ch211-153b23.3	100	77.442	ENSATEG00000004956	si:ch211-153b23.3	97	77.442	Anabas_testudineus
ENSORLG00015003698	si:ch211-153b23.3	100	77.661	ENSACLG00000005894	si:ch211-153b23.3	97	77.661	Astatotilapia_calliptera
ENSORLG00015003698	si:ch211-153b23.3	100	70.657	ENSAMXG00000038564	si:ch211-153b23.3	97	70.657	Astyanax_mexicanus
ENSORLG00015003698	si:ch211-153b23.3	100	75.494	ENSCSEG00000014853	si:ch211-153b23.3	97	75.494	Cynoglossus_semilaevis
ENSORLG00015003698	si:ch211-153b23.3	75	30.312	ENSCVAG00000021145	si:ch211-153b23.4	77	30.469	Cyprinodon_variegatus
ENSORLG00015003698	si:ch211-153b23.3	100	79.907	ENSCVAG00000021124	si:ch211-153b23.3	97	79.907	Cyprinodon_variegatus
ENSORLG00015003698	si:ch211-153b23.3	100	69.302	ENSDARG00000104919	si:ch211-153b23.3	97	69.302	Danio_rerio
ENSORLG00015003698	si:ch211-153b23.3	78	88.235	ENSELUG00000004912	si:ch211-153b23.3	96	88.235	Esox_lucius
ENSORLG00015003698	si:ch211-153b23.3	100	81.192	ENSFHEG00000010030	si:ch211-153b23.3	97	81.192	Fundulus_heteroclitus
ENSORLG00015003698	si:ch211-153b23.3	72	30.146	ENSFHEG00000010001	si:ch211-153b23.4	74	30.308	Fundulus_heteroclitus
ENSORLG00015003698	si:ch211-153b23.3	100	80.374	ENSGAFG00000007455	si:ch211-153b23.3	97	80.374	Gambusia_affinis
ENSORLG00015003698	si:ch211-153b23.3	74	30.671	ENSHBUG00000000013	si:ch211-153b23.4	80	30.671	Haplochromis_burtoni
ENSORLG00015003698	si:ch211-153b23.3	100	78.154	ENSHBUG00000001760	si:ch211-153b23.3	97	78.154	Haplochromis_burtoni
ENSORLG00015003698	si:ch211-153b23.3	100	70.401	ENSIPUG00000015213	si:ch211-153b23.3	97	70.401	Ictalurus_punctatus
ENSORLG00015003698	si:ch211-153b23.3	100	79.439	ENSKMAG00000006792	si:ch211-153b23.3	97	79.439	Kryptolebias_marmoratus
ENSORLG00015003698	si:ch211-153b23.3	100	78.721	ENSLBEG00000026324	si:ch211-153b23.3	97	78.721	Labrus_bergylta
ENSORLG00015003698	si:ch211-153b23.3	72	32.190	ENSLACG00000017592	si:ch211-153b23.4	71	31.922	Latimeria_chalumnae
ENSORLG00015003698	si:ch211-153b23.3	94	56.064	ENSLACG00000005800	-	96	55.857	Latimeria_chalumnae
ENSORLG00015003698	si:ch211-153b23.3	89	55.102	ENSLOCG00000015063	si:ch211-153b23.3	98	55.102	Lepisosteus_oculatus
ENSORLG00015003698	si:ch211-153b23.3	100	77.558	ENSMAMG00000009328	si:ch211-153b23.3	97	77.558	Mastacembelus_armatus
ENSORLG00015003698	si:ch211-153b23.3	74	30.586	ENSMZEG00005011433	si:ch211-153b23.4	74	30.586	Maylandia_zebra
ENSORLG00015003698	si:ch211-153b23.3	100	77.661	ENSMZEG00005011450	si:ch211-153b23.3	97	77.661	Maylandia_zebra
ENSORLG00015003698	si:ch211-153b23.3	100	77.130	ENSMMOG00000004436	si:ch211-153b23.3	97	77.130	Mola_mola
ENSORLG00015003698	si:ch211-153b23.3	74	30.586	ENSNBRG00000013392	si:ch211-153b23.4	76	30.586	Neolamprologus_brichardi
ENSORLG00015003698	si:ch211-153b23.3	100	77.895	ENSNBRG00000013370	si:ch211-153b23.3	97	77.895	Neolamprologus_brichardi
ENSORLG00015003698	si:ch211-153b23.3	72	30.894	ENSONIG00000017875	si:ch211-153b23.4	68	30.894	Oreochromis_niloticus
ENSORLG00015003698	si:ch211-153b23.3	100	97.743	ENSORLG00000006161	si:ch211-153b23.3	97	97.743	Oryzias_latipes
ENSORLG00015003698	si:ch211-153b23.3	100	97.847	ENSORLG00020000910	si:ch211-153b23.3	100	97.847	Oryzias_latipes_hni
ENSORLG00015003698	si:ch211-153b23.3	100	90.510	ENSOMEG00000007661	si:ch211-153b23.3	97	90.510	Oryzias_melastigma
ENSORLG00015003698	si:ch211-153b23.3	99	49.772	ENSPKIG00000021029	-	96	49.886	Paramormyrops_kingsleyae
ENSORLG00015003698	si:ch211-153b23.3	100	70.671	ENSPKIG00000022450	si:ch211-153b23.3	100	70.671	Paramormyrops_kingsleyae
ENSORLG00015003698	si:ch211-153b23.3	67	32.168	ENSPKIG00000014429	si:ch211-153b23.4	66	32.168	Paramormyrops_kingsleyae
ENSORLG00015003698	si:ch211-153b23.3	77	75.932	ENSPMGG00000001311	si:ch211-153b23.3	89	75.932	Periophthalmus_magnuspinnatus
ENSORLG00015003698	si:ch211-153b23.3	100	80.836	ENSPFOG00000012289	si:ch211-153b23.3	97	80.836	Poecilia_formosa
ENSORLG00015003698	si:ch211-153b23.3	100	81.447	ENSPLAG00000016320	si:ch211-153b23.3	97	81.447	Poecilia_latipinna
ENSORLG00015003698	si:ch211-153b23.3	100	81.776	ENSPMEG00000008884	si:ch211-153b23.3	97	81.776	Poecilia_mexicana
ENSORLG00015003698	si:ch211-153b23.3	100	78.037	ENSPNYG00000000251	si:ch211-153b23.3	97	78.037	Pundamilia_nyererei
ENSORLG00015003698	si:ch211-153b23.3	74	30.586	ENSPNYG00000000250	si:ch211-153b23.4	74	30.586	Pundamilia_nyererei
ENSORLG00015003698	si:ch211-153b23.3	100	71.795	ENSPNAG00000019592	si:ch211-153b23.3	97	71.795	Pygocentrus_nattereri
ENSORLG00015003698	si:ch211-153b23.3	69	50.333	ENSSFOG00015009030	-	92	50.333	Scleropages_formosus
ENSORLG00015003698	si:ch211-153b23.3	100	70.574	ENSSFOG00015010910	si:ch211-153b23.3	97	70.574	Scleropages_formosus
ENSORLG00015003698	si:ch211-153b23.3	100	79.744	ENSSMAG00000005446	si:ch211-153b23.3	98	79.744	Scophthalmus_maximus
ENSORLG00015003698	si:ch211-153b23.3	100	79.791	ENSSLDG00000008629	si:ch211-153b23.3	97	79.791	Seriola_lalandi_dorsalis
ENSORLG00015003698	si:ch211-153b23.3	54	33.261	ENSTGUG00000005499	-	54	33.261	Taeniopygia_guttata
ENSORLG00015003698	si:ch211-153b23.3	99	74.435	ENSTRUG00000020530	si:ch211-153b23.3	97	74.911	Takifugu_rubripes
ENSORLG00015003698	si:ch211-153b23.3	92	84.232	ENSTNIG00000008962	si:ch211-153b23.3	97	84.232	Tetraodon_nigroviridis
ENSORLG00015003698	si:ch211-153b23.3	100	81.722	ENSXMAG00000029318	si:ch211-153b23.3	97	81.722	Xiphophorus_maculatus
ENSORLG00015003698	si:ch211-153b23.3	72	30.179	ENSXMAG00000009416	-	70	30.343	Xiphophorus_maculatus