EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015003907 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: -
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 6747 bases
Position: chr23:313009-319755
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015003191	tRNA_Me_trans	PF03054.16	5.6e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009702	-	1977	-	ENSORLP00015003191	414 (aa)	-	-

Gene Model

Click here to download ENSORLG00015003907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015003907	trmu	98	68.642	ENSG00000100416	TRMU	99	70.270	Homo_sapiens
ENSORLG00015003907	trmu	99	82.212	ENSAPOG00000014458	trmu	99	82.212	Acanthochromis_polyacanthus
ENSORLG00015003907	trmu	97	69.825	ENSAMEG00000003319	TRMU	96	69.825	Ailuropoda_melanoleuca
ENSORLG00015003907	trmu	99	81.490	ENSACIG00000002101	trmu	100	81.490	Amphilophus_citrinellus
ENSORLG00015003907	trmu	99	83.816	ENSAOCG00000013155	trmu	99	83.816	Amphiprion_ocellaris
ENSORLG00015003907	trmu	99	83.333	ENSAPEG00000013350	trmu	99	83.333	Amphiprion_percula
ENSORLG00015003907	trmu	99	80.825	ENSATEG00000007814	trmu	100	80.825	Anabas_testudineus
ENSORLG00015003907	trmu	92	70.185	ENSAPLG00000016380	TRMU	97	70.185	Anas_platyrhynchos
ENSORLG00015003907	trmu	97	70.398	ENSACAG00000007720	TRMU	96	70.398	Anolis_carolinensis
ENSORLG00015003907	trmu	98	68.642	ENSANAG00000038053	TRMU	96	68.642	Aotus_nancymaae
ENSORLG00015003907	trmu	99	83.293	ENSACLG00000005395	trmu	99	83.293	Astatotilapia_calliptera
ENSORLG00015003907	trmu	99	73.415	ENSAMXG00000005282	trmu	99	73.415	Astyanax_mexicanus
ENSORLG00015003907	trmu	99	68.460	ENSBTAG00000005595	TRMU	98	68.460	Bos_taurus
ENSORLG00015003907	trmu	92	39.276	WBGene00007114	mttu-1	98	39.276	Caenorhabditis_elegans
ENSORLG00015003907	trmu	99	66.993	ENSCJAG00000000198	TRMU	97	66.993	Callithrix_jacchus
ENSORLG00015003907	trmu	98	68.889	ENSCAFG00000000779	TRMU	95	68.889	Canis_familiaris
ENSORLG00015003907	trmu	98	68.889	ENSCAFG00020009184	TRMU	95	68.889	Canis_lupus_dingo
ENSORLG00015003907	trmu	98	68.642	ENSCHIG00000017074	TRMU	97	68.642	Capra_hircus
ENSORLG00015003907	trmu	96	69.925	ENSTSYG00000003853	TRMU	95	69.925	Carlito_syrichta
ENSORLG00015003907	trmu	94	65.356	ENSCAPG00000013034	TRMU	96	65.356	Cavia_aperea
ENSORLG00015003907	trmu	97	69.479	ENSCPOG00000020780	TRMU	96	69.479	Cavia_porcellus
ENSORLG00015003907	trmu	99	67.718	ENSCCAG00000021641	TRMU	98	67.718	Cebus_capucinus
ENSORLG00015003907	trmu	98	67.241	ENSCATG00000032800	TRMU	96	67.241	Cercocebus_atys
ENSORLG00015003907	trmu	97	69.479	ENSCLAG00000017269	TRMU	96	69.479	Chinchilla_lanigera
ENSORLG00015003907	trmu	98	67.734	ENSCSAG00000005279	TRMU	96	67.734	Chlorocebus_sabaeus
ENSORLG00015003907	trmu	90	69.086	ENSCPBG00000011621	TRMU	93	69.086	Chrysemys_picta_bellii
ENSORLG00015003907	trmu	94	48.454	ENSCING00000019371	-	95	48.454	Ciona_intestinalis
ENSORLG00015003907	trmu	99	67.233	ENSCANG00000041645	TRMU	98	67.233	Colobus_angolensis_palliatus
ENSORLG00015003907	trmu	99	66.344	ENSCGRG00001001739	Trmu	97	66.344	Cricetulus_griseus_chok1gshd
ENSORLG00015003907	trmu	99	60.775	ENSCGRG00000002781	Trmu	97	60.775	Cricetulus_griseus_crigri
ENSORLG00015003907	trmu	99	76.829	ENSCSEG00000012382	trmu	99	76.829	Cynoglossus_semilaevis
ENSORLG00015003907	trmu	99	81.928	ENSCVAG00000001366	trmu	99	81.928	Cyprinodon_variegatus
ENSORLG00015003907	trmu	99	70.913	ENSDARG00000043734	trmu	100	70.913	Danio_rerio
ENSORLG00015003907	trmu	64	57.463	ENSDNOG00000047245	-	94	57.463	Dasypus_novemcinctus
ENSORLG00015003907	trmu	99	69.363	ENSDORG00000007455	Trmu	99	69.363	Dipodomys_ordii
ENSORLG00015003907	trmu	93	43.782	FBgn0040337	CG3021	95	43.782	Drosophila_melanogaster
ENSORLG00015003907	trmu	93	55.499	ENSEBUG00000007454	trmu	100	54.179	Eptatretus_burgeri
ENSORLG00015003907	trmu	98	70.123	ENSEASG00005021725	TRMU	96	70.123	Equus_asinus_asinus
ENSORLG00015003907	trmu	98	70.123	ENSECAG00000000467	TRMU	96	70.123	Equus_caballus
ENSORLG00015003907	trmu	69	52.448	ENSEEUG00000000074	-	68	52.448	Erinaceus_europaeus
ENSORLG00015003907	trmu	99	76.570	ENSELUG00000009464	trmu	99	77.989	Esox_lucius
ENSORLG00015003907	trmu	96	70.175	ENSFCAG00000006533	TRMU	95	70.175	Felis_catus
ENSORLG00015003907	trmu	92	69.509	ENSFALG00000010035	TRMU	98	69.509	Ficedula_albicollis
ENSORLG00015003907	trmu	91	67.196	ENSFDAG00000017472	TRMU	96	67.196	Fukomys_damarensis
ENSORLG00015003907	trmu	99	82.651	ENSFHEG00000003162	trmu	98	83.651	Fundulus_heteroclitus
ENSORLG00015003907	trmu	97	71.499	ENSGMOG00000001323	trmu	100	71.499	Gadus_morhua
ENSORLG00015003907	trmu	97	69.756	ENSGALG00000031922	TRMU	97	69.756	Gallus_gallus
ENSORLG00015003907	trmu	98	84.236	ENSGAFG00000013331	trmu	97	84.236	Gambusia_affinis
ENSORLG00015003907	trmu	99	79.621	ENSGACG00000019024	trmu	99	79.621	Gasterosteus_aculeatus
ENSORLG00015003907	trmu	98	68.395	ENSGGOG00000000203	TRMU	96	68.395	Gorilla_gorilla
ENSORLG00015003907	trmu	99	83.293	ENSHBUG00000023421	trmu	99	83.293	Haplochromis_burtoni
ENSORLG00015003907	trmu	97	68.159	ENSHGLG00000009278	TRMU	95	68.159	Heterocephalus_glaber_female
ENSORLG00015003907	trmu	97	68.159	ENSHGLG00100018863	TRMU	95	68.159	Heterocephalus_glaber_male
ENSORLG00015003907	trmu	100	78.554	ENSHCOG00000013459	trmu	100	78.554	Hippocampus_comes
ENSORLG00015003907	trmu	96	75.940	ENSIPUG00000009785	trmu	98	75.940	Ictalurus_punctatus
ENSORLG00015003907	trmu	99	68.949	ENSSTOG00000010993	TRMU	96	68.949	Ictidomys_tridecemlineatus
ENSORLG00015003907	trmu	97	68.905	ENSJJAG00000000667	Trmu	96	68.905	Jaculus_jaculus
ENSORLG00015003907	trmu	99	81.687	ENSKMAG00000008516	trmu	99	81.687	Kryptolebias_marmoratus
ENSORLG00015003907	trmu	99	80.241	ENSLBEG00000018831	trmu	99	80.241	Labrus_bergylta
ENSORLG00015003907	trmu	97	72.208	ENSLACG00000013713	TRMU	96	72.208	Latimeria_chalumnae
ENSORLG00015003907	trmu	97	77.057	ENSLOCG00000016066	trmu	96	77.057	Lepisosteus_oculatus
ENSORLG00015003907	trmu	95	61.809	ENSLAFG00000005129	TRMU	95	61.809	Loxodonta_africana
ENSORLG00015003907	trmu	98	67.980	ENSMFAG00000039767	TRMU	96	67.980	Macaca_fascicularis
ENSORLG00015003907	trmu	98	67.980	ENSMMUG00000000807	TRMU	96	67.980	Macaca_mulatta
ENSORLG00015003907	trmu	98	67.980	ENSMNEG00000028164	TRMU	96	67.980	Macaca_nemestrina
ENSORLG00015003907	trmu	98	67.488	ENSMLEG00000033884	TRMU	96	67.488	Mandrillus_leucophaeus
ENSORLG00015003907	trmu	99	80.387	ENSMAMG00000004717	trmu	99	80.387	Mastacembelus_armatus
ENSORLG00015003907	trmu	99	83.293	ENSMZEG00005015797	trmu	99	83.293	Maylandia_zebra
ENSORLG00015003907	trmu	79	67.568	ENSMGAG00000007550	TRMU	97	67.568	Meleagris_gallopavo
ENSORLG00015003907	trmu	96	67.419	ENSMAUG00000022282	Trmu	96	67.419	Mesocricetus_auratus
ENSORLG00015003907	trmu	95	69.114	ENSMICG00000029046	TRMU	96	69.114	Microcebus_murinus
ENSORLG00015003907	trmu	97	67.742	ENSMOCG00000014641	Trmu	97	67.742	Microtus_ochrogaster
ENSORLG00015003907	trmu	99	78.554	ENSMMOG00000007229	trmu	99	78.554	Mola_mola
ENSORLG00015003907	trmu	96	66.332	ENSMODG00000007433	TRMU	93	66.332	Monodelphis_domestica
ENSORLG00015003907	trmu	99	79.277	ENSMALG00000007721	trmu	99	79.277	Monopterus_albus
ENSORLG00015003907	trmu	99	66.344	MGP_CAROLIEiJ_G0020134	Trmu	98	66.344	Mus_caroli
ENSORLG00015003907	trmu	99	66.344	ENSMUSG00000022386	Trmu	98	66.344	Mus_musculus
ENSORLG00015003907	trmu	99	66.102	MGP_PahariEiJ_G0020139	Trmu	98	66.102	Mus_pahari
ENSORLG00015003907	trmu	99	66.344	MGP_SPRETEiJ_G0021031	Trmu	98	66.344	Mus_spretus
ENSORLG00015003907	trmu	98	69.136	ENSMPUG00000002523	TRMU	96	69.136	Mustela_putorius_furo
ENSORLG00015003907	trmu	99	67.874	ENSNGAG00000005132	Trmu	99	67.874	Nannospalax_galili
ENSORLG00015003907	trmu	99	82.809	ENSNBRG00000022690	trmu	99	82.963	Neolamprologus_brichardi
ENSORLG00015003907	trmu	98	68.395	ENSNLEG00000015773	TRMU	96	68.395	Nomascus_leucogenys
ENSORLG00015003907	trmu	79	56.881	ENSMEUG00000000216	TRMU	99	56.881	Notamacropus_eugenii
ENSORLG00015003907	trmu	97	68.734	ENSODEG00000014745	TRMU	97	68.395	Octodon_degus
ENSORLG00015003907	trmu	99	83.535	ENSONIG00000009821	trmu	99	83.535	Oreochromis_niloticus
ENSORLG00015003907	trmu	93	63.918	ENSOANG00000001891	TRMU	98	63.918	Ornithorhynchus_anatinus
ENSORLG00015003907	trmu	91	68.351	ENSOCUG00000003664	TRMU	94	67.259	Oryctolagus_cuniculus
ENSORLG00015003907	trmu	100	99.517	ENSORLG00000019015	trmu	100	99.517	Oryzias_latipes
ENSORLG00015003907	trmu	100	100.000	ENSORLG00020006830	trmu	100	100.000	Oryzias_latipes_hni
ENSORLG00015003907	trmu	55	92.140	ENSOMEG00000015541	trmu	83	92.140	Oryzias_melastigma
ENSORLG00015003907	trmu	98	67.160	ENSOGAG00000008096	TRMU	97	67.160	Otolemur_garnettii
ENSORLG00015003907	trmu	92	66.579	ENSOARG00000019475	TRMU	93	66.579	Ovis_aries
ENSORLG00015003907	trmu	98	68.395	ENSPPAG00000033944	TRMU	96	68.395	Pan_paniscus
ENSORLG00015003907	trmu	96	70.175	ENSPPRG00000004197	TRMU	95	70.175	Panthera_pardus
ENSORLG00015003907	trmu	67	69.314	ENSPTIG00000014122	TRMU	97	70.833	Panthera_tigris_altaica
ENSORLG00015003907	trmu	98	68.395	ENSPTRG00000014510	TRMU	96	68.395	Pan_troglodytes
ENSORLG00015003907	trmu	95	68.861	ENSPANG00000023074	TRMU	97	65.753	Papio_anubis
ENSORLG00015003907	trmu	99	72.639	ENSPKIG00000002849	trmu	99	72.639	Paramormyrops_kingsleyae
ENSORLG00015003907	trmu	88	70.055	ENSPSIG00000013020	TRMU	95	70.055	Pelodiscus_sinensis
ENSORLG00015003907	trmu	99	79.805	ENSPMGG00000004083	trmu	99	79.805	Periophthalmus_magnuspinnatus
ENSORLG00015003907	trmu	96	67.419	ENSPEMG00000014007	Trmu	96	67.419	Peromyscus_maniculatus_bairdii
ENSORLG00015003907	trmu	95	65.394	ENSPCIG00000009923	TRMU	93	65.239	Phascolarctos_cinereus
ENSORLG00015003907	trmu	97	79.250	ENSPFOG00000008197	trmu	89	79.250	Poecilia_formosa
ENSORLG00015003907	trmu	99	82.927	ENSPLAG00000008414	trmu	99	82.927	Poecilia_latipinna
ENSORLG00015003907	trmu	99	83.171	ENSPMEG00000004326	trmu	99	83.171	Poecilia_mexicana
ENSORLG00015003907	trmu	99	82.651	ENSPREG00000007980	trmu	99	82.651	Poecilia_reticulata
ENSORLG00015003907	trmu	98	68.395	ENSPPYG00000011949	TRMU	96	68.395	Pongo_abelii
ENSORLG00015003907	trmu	91	62.334	ENSPCAG00000013462	TRMU	97	62.334	Procavia_capensis
ENSORLG00015003907	trmu	97	67.830	ENSPCOG00000016539	TRMU	96	67.830	Propithecus_coquereli
ENSORLG00015003907	trmu	97	63.342	ENSPVAG00000013202	TRMU	96	63.342	Pteropus_vampyrus
ENSORLG00015003907	trmu	99	82.809	ENSPNYG00000005629	trmu	99	82.809	Pundamilia_nyererei
ENSORLG00015003907	trmu	97	76.060	ENSPNAG00000006339	trmu	94	76.060	Pygocentrus_nattereri
ENSORLG00015003907	trmu	99	66.344	ENSRNOG00000016465	Trmu	98	66.344	Rattus_norvegicus
ENSORLG00015003907	trmu	98	66.995	ENSRBIG00000038973	TRMU	96	66.995	Rhinopithecus_bieti
ENSORLG00015003907	trmu	98	67.241	ENSRROG00000004267	TRMU	96	67.241	Rhinopithecus_roxellana
ENSORLG00015003907	trmu	93	33.333	YDL033C	SLM3	93	33.333	Saccharomyces_cerevisiae
ENSORLG00015003907	trmu	98	68.317	ENSSBOG00000030184	TRMU	96	68.317	Saimiri_boliviensis_boliviensis
ENSORLG00015003907	trmu	89	72.703	ENSSFOG00015020664	trmu	97	72.703	Scleropages_formosus
ENSORLG00015003907	trmu	99	82.169	ENSSMAG00000019450	trmu	99	82.169	Scophthalmus_maximus
ENSORLG00015003907	trmu	99	83.614	ENSSDUG00000011913	trmu	99	83.614	Seriola_dumerili
ENSORLG00015003907	trmu	99	83.373	ENSSLDG00000011684	trmu	99	83.373	Seriola_lalandi_dorsalis
ENSORLG00015003907	trmu	99	58.537	ENSSPUG00000017123	TRMU	97	58.537	Sphenodon_punctatus
ENSORLG00015003907	trmu	99	82.082	ENSSPAG00000021875	trmu	99	82.082	Stegastes_partitus
ENSORLG00015003907	trmu	99	67.482	ENSSSCG00000000007	TRMU	98	66.828	Sus_scrofa
ENSORLG00015003907	trmu	90	71.582	ENSTGUG00000003663	-	100	71.582	Taeniopygia_guttata
ENSORLG00015003907	trmu	99	80.825	ENSTRUG00000001231	trmu	99	80.825	Takifugu_rubripes
ENSORLG00015003907	trmu	100	79.187	ENSTNIG00000010484	trmu	99	79.187	Tetraodon_nigroviridis
ENSORLG00015003907	trmu	89	42.547	ENSTBEG00000011276	-	95	42.547	Tupaia_belangeri
ENSORLG00015003907	trmu	97	70.075	ENSTTRG00000004160	TRMU	95	70.075	Tursiops_truncatus
ENSORLG00015003907	trmu	71	70.548	ENSUAMG00000024825	TRMU	97	70.548	Ursus_americanus
ENSORLG00015003907	trmu	96	57.683	ENSUMAG00000019079	TRMU	97	69.650	Ursus_maritimus
ENSORLG00015003907	trmu	51	60.094	ENSVPAG00000000685	-	98	60.094	Vicugna_pacos
ENSORLG00015003907	trmu	98	68.148	ENSVVUG00000024963	TRMU	96	68.148	Vulpes_vulpes
ENSORLG00015003907	trmu	97	71.960	ENSXETG00000023304	trmu	95	71.960	Xenopus_tropicalis
ENSORLG00015003907	trmu	99	80.861	ENSXCOG00000015105	trmu	99	80.861	Xiphophorus_couchianus
ENSORLG00015003907	trmu	99	83.373	ENSXMAG00000006697	trmu	99	83.373	Xiphophorus_maculatus