EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015003916 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Minus strand
Length
32491 bases
Position
chr5:18930578-18963068
Accession
101154771
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015003132RRM_1PF00076.221.8e-3412
ENSORLP00015003132RRM_1PF00076.221.8e-3422
ENSORLP00015003186RRM_1PF00076.222.5e-3412
ENSORLP00015003186RRM_1PF00076.222.5e-3422
ENSORLP00015003162RRM_1PF00076.222.6e-3412
ENSORLP00015003162RRM_1PF00076.222.6e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015009723MSI1-2013442XM_023955028ENSORLP00015003186349 (aa)XP_023810796UPI0009DA90A3
ENSORLT00015009781MSI1-203954-ENSORLP00015003132317 (aa)--
ENSORLT00015009749MSI1-2022009-ENSORLP00015003162355 (aa)-UPI000CE22FFB
Gene Model
Click here to download ENSORLG00015003916's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015003916's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015003916MSI15642.529ENSORLG00015022294-5642.135
ENSORLG00015003916MSI16133.178ENSORLG00015016236HNRNPA07333.333
ENSORLG00015003916MSI15837.241ENSORLG00015005048tardbpl5337.241
ENSORLG00015003916MSI16234.337ENSORLG00015015204-7335.443
ENSORLG00015003916MSI15433.918ENSORLG00015017343tardbp5534.524
ENSORLG00015003916MSI15638.857ENSORLG00015016302HNRNPA09433.219
ENSORLG00015003916MSI15444.379ENSORLG00015014131hnrnpabb8336.957
ENSORLG00015003916MSI15237.079ENSORLG00015013567rbm24a8638.636
ENSORLG00015003916MSI15444.970ENSORLG00015022877hnrnpaba7936.996
ENSORLG00015003916MSI19974.576ENSORLG00015004592msi2a9474.576
ENSORLG00015003916MSI15436.207ENSORLG00015017144-5836.207
ENSORLG00015003916MSI15037.079ENSORLG00015000583rbm24b8935.789
ENSORLG00015003916MSI16034.555ENSORLG00015015185-8331.837
ENSORLG00015003916MSI16035.417ENSORLG00015015182-8235.417
ENSORLG00015003916MSI15548.366ENSORLG00015002382hnrnpd7938.911
ENSORLG00015003916MSI15941.848ENSORLG00015014774hnrnpa38135.235
ENSORLG00015003916MSI15935.484ENSORLG00015016507-5935.897
ENSORLG00015003916MSI19992.258ENSORLG00015013672-7290.566
ENSORLG00015003916MSI16034.737ENSORLG00015016169HNRNPA06236.364
ENSORLG00015003916MSI16035.870ENSORLG00015016157-7135.870
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015003916MSI110083.791ENSG00000135097MSI19986.207Homo_sapiens
ENSORLG00015003916MSI110091.168ENSAPOG00000023458-10091.168Acanthochromis_polyacanthus
ENSORLG00015003916MSI110098.281ENSAPOG00000003191MSI110098.281Acanthochromis_polyacanthus
ENSORLG00015003916MSI19967.680ENSAMEG00000013302MSI18392.308Ailuropoda_melanoleuca
ENSORLG00015003916MSI19396.831ENSACIG00000017754-7993.016Amphilophus_citrinellus
ENSORLG00015003916MSI110098.281ENSAOCG00000003804MSI110098.281Amphiprion_ocellaris
ENSORLG00015003916MSI19985.580ENSAOCG00000009031-9885.266Amphiprion_ocellaris
ENSORLG00015003916MSI110091.168ENSAPEG00000006857-8491.168Amphiprion_percula
ENSORLG00015003916MSI110098.281ENSAPEG00000003245MSI110098.281Amphiprion_percula
ENSORLG00015003916MSI110090.085ENSATEG00000023779-10090.085Anabas_testudineus
ENSORLG00015003916MSI110086.835ENSATEG00000017059MSI110086.835Anabas_testudineus
ENSORLG00015003916MSI110083.425ENSACAG00000002762MSI110084.254Anolis_carolinensis
ENSORLG00015003916MSI110083.791ENSANAG00000027151MSI110083.791Aotus_nancymaae
ENSORLG00015003916MSI18282.986ENSANAG00000027901-8882.986Aotus_nancymaae
ENSORLG00015003916MSI110096.296ENSACLG00000011230MSI110096.296Astatotilapia_calliptera
ENSORLG00015003916MSI110091.429ENSACLG00000000117-10092.355Astatotilapia_calliptera
ENSORLG00015003916MSI19988.333ENSAMXG00000038960msi17688.401Astyanax_mexicanus
ENSORLG00015003916MSI19987.888ENSBTAG00000009800MSI110087.888Bos_taurus
ENSORLG00015003916MSI19986.970ENSCJAG00000008578MSI110083.791Callithrix_jacchus
ENSORLG00015003916MSI110083.516ENSCAFG00000010283MSI110083.516Canis_familiaris
ENSORLG00015003916MSI19981.994ENSCAFG00020020585MSI110085.209Canis_lupus_dingo
ENSORLG00015003916MSI110082.385ENSCHIG00000024304MSI110082.385Capra_hircus
ENSORLG00015003916MSI19982.263ENSTSYG00000033949MSI19585.321Carlito_syrichta
ENSORLG00015003916MSI19485.348ENSCAPG00000003919MSI17885.348Cavia_aperea
ENSORLG00015003916MSI19983.041ENSCPOG00000012361MSI110085.965Cavia_porcellus
ENSORLG00015003916MSI110083.791ENSCCAG00000035567MSI110083.791Cebus_capucinus
ENSORLG00015003916MSI19985.241ENSCATG00000030019MSI110083.791Cercocebus_atys
ENSORLG00015003916MSI19983.041ENSCLAG00000011329MSI110085.965Chinchilla_lanigera
ENSORLG00015003916MSI17391.518ENSCSAG00000002265MSI19682.437Chlorocebus_sabaeus
ENSORLG00015003916MSI19989.557ENSCPBG00000011349MSI110086.402Chrysemys_picta_bellii
ENSORLG00015003916MSI19982.317ENSCANG00000040651MSI110085.366Colobus_angolensis_palliatus
ENSORLG00015003916MSI110083.791ENSCGRG00001018883Msi110083.791Cricetulus_griseus_chok1gshd
ENSORLG00015003916MSI19982.371ENSCGRG00000002191Msi17285.410Cricetulus_griseus_crigri
ENSORLG00015003916MSI19988.274ENSCSEG00000011032MSI110088.274Cynoglossus_semilaevis
ENSORLG00015003916MSI110090.000ENSCSEG00000008352-10090.000Cynoglossus_semilaevis
ENSORLG00015003916MSI110096.571ENSCSEG00000005834-10096.571Cynoglossus_semilaevis
ENSORLG00015003916MSI15173.134ENSCVAG00000017430zgc:1107969473.134Cyprinodon_variegatus
ENSORLG00015003916MSI16280.556ENSCVAG00000017463-8980.556Cyprinodon_variegatus
ENSORLG00015003916MSI110091.714ENSCVAG00000009100MSI110091.714Cyprinodon_variegatus
ENSORLG00015003916MSI19989.527ENSDARG00000010710msi110092.056Danio_rerio
ENSORLG00015003916MSI17990.698ENSDARG00000102015CABZ01037298.18990.698Danio_rerio
ENSORLG00015003916MSI19979.114ENSDNOG00000005713MSI19182.278Dasypus_novemcinctus
ENSORLG00015003916MSI19981.737ENSDORG00000005610Msi19484.731Dipodomys_ordii
ENSORLG00015003916MSI19979.878ENSETEG00000004756MSI110082.622Echinops_telfairi
ENSORLG00015003916MSI19987.926ENSEASG00005004736MSI19887.926Equus_asinus_asinus
ENSORLG00015003916MSI19987.273ENSECAG00000017526MSI110083.791Equus_caballus
ENSORLG00015003916MSI19684.494ENSELUG00000023219MSI19285.100Esox_lucius
ENSORLG00015003916MSI19987.188ENSELUG00000023280-10087.188Esox_lucius
ENSORLG00015003916MSI19986.970ENSFCAG00000011007MSI110083.791Felis_catus
ENSORLG00015003916MSI19985.000ENSFALG00000007574MSI110088.333Ficedula_albicollis
ENSORLG00015003916MSI19982.012ENSFDAG00000019586MSI110085.061Fukomys_damarensis
ENSORLG00015003916MSI110091.453ENSFHEG00000022446MSI110091.453Fundulus_heteroclitus
ENSORLG00015003916MSI110098.286ENSFHEG00000003560-10098.286Fundulus_heteroclitus
ENSORLG00015003916MSI110090.258ENSGMOG00000001006MSI19989.971Gadus_morhua
ENSORLG00015003916MSI110085.876ENSGMOG00000017838-10085.876Gadus_morhua
ENSORLG00015003916MSI19985.115ENSGALG00000007227MSI19677.273Gallus_gallus
ENSORLG00015003916MSI19475.667ENSGAFG00000005860-10069.405Gambusia_affinis
ENSORLG00015003916MSI110092.429ENSGAFG00000021522MSI19498.165Gambusia_affinis
ENSORLG00015003916MSI110087.603ENSGACG00000008674-10087.603Gasterosteus_aculeatus
ENSORLG00015003916MSI110089.459ENSGACG00000012679MSI110089.459Gasterosteus_aculeatus
ENSORLG00015003916MSI19990.385ENSGAGG00000016037MSI110086.119Gopherus_agassizii
ENSORLG00015003916MSI19981.847ENSGGOG00000010328MSI110085.032Gorilla_gorilla
ENSORLG00015003916MSI110091.429ENSHBUG00000011841-10091.429Haplochromis_burtoni
ENSORLG00015003916MSI110096.296ENSHBUG00000021921MSI110096.296Haplochromis_burtoni
ENSORLG00015003916MSI110083.516ENSHGLG00000012782MSI110083.516Heterocephalus_glaber_female
ENSORLG00015003916MSI19982.012ENSHGLG00100016848MSI110085.061Heterocephalus_glaber_male
ENSORLG00015003916MSI19996.091ENSHCOG00000012019MSI110096.091Hippocampus_comes
ENSORLG00015003916MSI19991.892ENSHCOG00000012067-10086.441Hippocampus_comes
ENSORLG00015003916MSI110087.179ENSIPUG00000001976msi110087.179Ictalurus_punctatus
ENSORLG00015003916MSI19981.994ENSSTOG00000009799MSI110085.209Ictidomys_tridecemlineatus
ENSORLG00015003916MSI19974.847ENSJJAG00000010643-10071.389Jaculus_jaculus
ENSORLG00015003916MSI110083.791ENSJJAG00000010463Msi110083.791Jaculus_jaculus
ENSORLG00015003916MSI110091.691ENSKMAG00000011251MSI110091.691Kryptolebias_marmoratus
ENSORLG00015003916MSI19999.349ENSKMAG00000019877-10099.349Kryptolebias_marmoratus
ENSORLG00015003916MSI110097.143ENSLBEG00000001375-10097.143Labrus_bergylta
ENSORLG00015003916MSI19992.581ENSLBEG00000008789MSI110091.453Labrus_bergylta
ENSORLG00015003916MSI19981.471ENSLACG00000018287MSI110082.749Latimeria_chalumnae
ENSORLG00015003916MSI15275.893ENSLOCG00000008618zgc:1107967175.893Lepisosteus_oculatus
ENSORLG00015003916MSI19379.016ENSLAFG00000009412MSI110078.689Loxodonta_africana
ENSORLG00015003916MSI19983.041ENSMFAG00000001798MSI110085.965Macaca_fascicularis
ENSORLG00015003916MSI19983.041ENSMMUG00000031527MSI19982.778Macaca_mulatta
ENSORLG00015003916MSI19987.926ENSMNEG00000040034MSI19887.926Macaca_nemestrina
ENSORLG00015003916MSI19982.317ENSMLEG00000003921MSI110085.366Mandrillus_leucophaeus
ENSORLG00015003916MSI110091.404ENSMAMG00000002279MSI110091.404Mastacembelus_armatus
ENSORLG00015003916MSI110097.994ENSMAMG00000018426-10097.994Mastacembelus_armatus
ENSORLG00015003916MSI110096.296ENSMZEG00005026892MSI110096.296Maylandia_zebra
ENSORLG00015003916MSI110091.429ENSMZEG00005000340-10091.429Maylandia_zebra
ENSORLG00015003916MSI17291.716ENSMGAG00000016518-10091.716Meleagris_gallopavo
ENSORLG00015003916MSI17391.518ENSMAUG00000016820Msi110088.477Mesocricetus_auratus
ENSORLG00015003916MSI110083.791ENSMICG00000033181MSI110083.791Microcebus_murinus
ENSORLG00015003916MSI110083.516ENSMOCG00000002286Msi110083.516Microtus_ochrogaster
ENSORLG00015003916MSI19995.380ENSMMOG00000012265-9995.380Mola_mola
ENSORLG00015003916MSI19985.397ENSMMOG00000010492MSI19685.397Mola_mola
ENSORLG00015003916MSI19357.831ENSMODG00000003189-10059.036Monodelphis_domestica
ENSORLG00015003916MSI19997.068ENSMALG00000001426-10097.068Monopterus_albus
ENSORLG00015003916MSI110091.429ENSMALG00000017889MSI110091.429Monopterus_albus
ENSORLG00015003916MSI110083.242MGP_CAROLIEiJ_G0027626Msi19889.354Mus_caroli
ENSORLG00015003916MSI19985.185ENSMUSG00000054256Msi19889.354Mus_musculus
ENSORLG00015003916MSI110086.080MGP_PahariEiJ_G0024206Msi19889.695Mus_pahari
ENSORLG00015003916MSI110083.242MGP_SPRETEiJ_G0028624Msi19889.354Mus_spretus
ENSORLG00015003916MSI19981.994ENSMPUG00000003168MSI110085.209Mustela_putorius_furo
ENSORLG00015003916MSI19973.512ENSMLUG00000010313MSI110076.488Myotis_lucifugus
ENSORLG00015003916MSI19982.371ENSNGAG00000014508Msi19880.055Nannospalax_galili
ENSORLG00015003916MSI110091.429ENSNBRG00000000841-10091.429Neolamprologus_brichardi
ENSORLG00015003916MSI18787.705ENSNBRG00000018012MSI19987.705Neolamprologus_brichardi
ENSORLG00015003916MSI19075.610ENSNLEG00000015636MSI110075.610Nomascus_leucogenys
ENSORLG00015003916MSI19963.415ENSMEUG00000015759MSI110066.463Notamacropus_eugenii
ENSORLG00015003916MSI19674.603ENSOPRG00000016879MSI110077.778Ochotona_princeps
ENSORLG00015003916MSI19982.317ENSODEG00000006328MSI110085.366Octodon_degus
ENSORLG00015003916MSI110093.132ENSONIG00000019452-10093.132Oreochromis_niloticus
ENSORLG00015003916MSI110091.429ENSONIG00000011182MSI110091.429Oreochromis_niloticus
ENSORLG00015003916MSI19982.315ENSOCUG00000027716MSI110085.531Oryctolagus_cuniculus
ENSORLG00015003916MSI1100100.000ENSORLG00000029593MSI1100100.000Oryzias_latipes
ENSORLG00015003916MSI19991.919ENSORLG00000019978-10090.883Oryzias_latipes
ENSORLG00015003916MSI1100100.000ENSORLG00020008266MSI1100100.000Oryzias_latipes_hni
ENSORLG00015003916MSI110090.883ENSORLG00020001208-7190.883Oryzias_latipes_hni
ENSORLG00015003916MSI110099.140ENSOMEG00000002272-10099.140Oryzias_melastigma
ENSORLG00015003916MSI110091.168ENSOMEG00000017536MSI110091.168Oryzias_melastigma
ENSORLG00015003916MSI19982.319ENSOGAG00000003847MSI19885.217Otolemur_garnettii
ENSORLG00015003916MSI19980.000ENSOARG00000012097MSI110083.030Ovis_aries
ENSORLG00015003916MSI19982.317ENSPPAG00000043073MSI110085.366Pan_paniscus
ENSORLG00015003916MSI110083.791ENSPPRG00000000370MSI110083.791Panthera_pardus
ENSORLG00015003916MSI19981.994ENSPTIG00000008913MSI110085.209Panthera_tigris_altaica
ENSORLG00015003916MSI19985.241ENSPTRG00000005531MSI110083.791Pan_troglodytes
ENSORLG00015003916MSI110083.516ENSPANG00000006335MSI110083.516Papio_anubis
ENSORLG00015003916MSI19994.175ENSPKIG00000016497MSI110093.143Paramormyrops_kingsleyae
ENSORLG00015003916MSI110090.286ENSPKIG00000023575-10090.286Paramormyrops_kingsleyae
ENSORLG00015003916MSI17981.140ENSPSIG00000009621-10081.579Pelodiscus_sinensis
ENSORLG00015003916MSI15383.761ENSPSIG00000016295-9583.761Pelodiscus_sinensis
ENSORLG00015003916MSI19982.979ENSPSIG00000011608-9386.280Pelodiscus_sinensis
ENSORLG00015003916MSI19691.892ENSPMGG00000000514MSI19791.892Periophthalmus_magnuspinnatus
ENSORLG00015003916MSI19975.312ENSPMGG00000007743-9871.182Periophthalmus_magnuspinnatus
ENSORLG00015003916MSI19981.009ENSPEMG00000010491Msi19583.976Peromyscus_maniculatus_bairdii
ENSORLG00015003916MSI110091.168ENSPFOG00000013113MSI110091.168Poecilia_formosa
ENSORLG00015003916MSI110098.286ENSPFOG00000008319-8698.286Poecilia_formosa
ENSORLG00015003916MSI110091.168ENSPLAG00000014025-10091.168Poecilia_latipinna
ENSORLG00015003916MSI110098.286ENSPLAG00000012431-9798.286Poecilia_latipinna
ENSORLG00015003916MSI110091.168ENSPMEG00000012796MSI110091.168Poecilia_mexicana
ENSORLG00015003916MSI110098.281ENSPMEG00000007025-9691.022Poecilia_mexicana
ENSORLG00015003916MSI19994.304ENSPREG00000021416-9494.304Poecilia_reticulata
ENSORLG00015003916MSI17887.129ENSPREG00000014574-10087.129Poecilia_reticulata
ENSORLG00015003916MSI110082.967ENSPPYG00000005027MSI110082.967Pongo_abelii
ENSORLG00015003916MSI17788.325ENSPCAG00000002300MSI17288.325Procavia_capensis
ENSORLG00015003916MSI110083.791ENSPCOG00000017341MSI110083.791Propithecus_coquereli
ENSORLG00015003916MSI19966.768ENSPVAG00000002225MSI110069.512Pteropus_vampyrus
ENSORLG00015003916MSI110091.429ENSPNYG00000002529-10091.429Pundamilia_nyererei
ENSORLG00015003916MSI110096.296ENSPNYG00000004379MSI110096.296Pundamilia_nyererei
ENSORLG00015003916MSI110087.749ENSPNAG00000019337msi110087.749Pygocentrus_nattereri
ENSORLG00015003916MSI19981.672ENSRNOG00000001156Msi110084.887Rattus_norvegicus
ENSORLG00015003916MSI19981.994ENSRBIG00000036889MSI110085.209Rhinopithecus_bieti
ENSORLG00015003916MSI19982.121ENSRROG00000041076MSI110079.452Rhinopithecus_roxellana
ENSORLG00015003916MSI19982.235ENSSBOG00000030259MSI19986.006Saimiri_boliviensis_boliviensis
ENSORLG00015003916MSI19971.242ENSSHAG00000006834MSI110074.510Sarcophilus_harrisii
ENSORLG00015003916MSI19992.880ENSSFOG00015005350MSI110092.880Scleropages_formosus
ENSORLG00015003916MSI19990.878ENSSFOG00015014964-9594.833Scleropages_formosus
ENSORLG00015003916MSI19497.318ENSSMAG00000009156-7297.030Scophthalmus_maximus
ENSORLG00015003916MSI19991.582ENSSMAG00000018824MSI19791.582Scophthalmus_maximus
ENSORLG00015003916MSI110097.429ENSSDUG00000022697-10097.429Seriola_dumerili
ENSORLG00015003916MSI110091.168ENSSDUG00000001027MSI110091.168Seriola_dumerili
ENSORLG00015003916MSI19991.195ENSSLDG00000018706-9991.195Seriola_lalandi_dorsalis
ENSORLG00015003916MSI110091.168ENSSLDG00000016832MSI110091.168Seriola_lalandi_dorsalis
ENSORLG00015003916MSI110086.119ENSSPUG00000015741MSI110086.119Sphenodon_punctatus
ENSORLG00015003916MSI15093.162ENSSPAG00000015573zgc:1107968279.012Stegastes_partitus
ENSORLG00015003916MSI17882.105ENSSPAG00000014085-10082.105Stegastes_partitus
ENSORLG00015003916MSI19996.835ENSSPAG00000013098-10097.256Stegastes_partitus
ENSORLG00015003916MSI19987.616ENSSSCG00000029365MSI19887.616Sus_scrofa
ENSORLG00015003916MSI19983.235ENSTGUG00000009534MSI110086.176Taeniopygia_guttata
ENSORLG00015003916MSI15079.798ENSTRUG00000021586-9979.798Takifugu_rubripes
ENSORLG00015003916MSI18089.862ENSTRUG00000016249MSI110081.028Takifugu_rubripes
ENSORLG00015003916MSI19990.508ENSTRUG00000015636-7990.508Takifugu_rubripes
ENSORLG00015003916MSI110086.648ENSTNIG00000011469MSI110086.648Tetraodon_nigroviridis
ENSORLG00015003916MSI19969.108ENSTNIG00000019814-9766.176Tetraodon_nigroviridis
ENSORLG00015003916MSI19973.723ENSTBEG00000007182MSI110075.177Tupaia_belangeri
ENSORLG00015003916MSI17787.970ENSTTRG00000005663MSI17887.970Tursiops_truncatus
ENSORLG00015003916MSI18084.259ENSUAMG00000015514MSI19486.512Ursus_americanus
ENSORLG00015003916MSI19983.221ENSUMAG00000006176MSI18883.221Ursus_maritimus
ENSORLG00015003916MSI19983.642ENSVVUG00000020993MSI110084.685Vulpes_vulpes
ENSORLG00015003916MSI110083.954ENSXETG00000012216msi110083.954Xenopus_tropicalis
ENSORLG00015003916MSI110085.489ENSXCOG00000017605MSI19285.489Xiphophorus_couchianus
ENSORLG00015003916MSI110091.714ENSXMAG00000027103MSI110079.552Xiphophorus_maculatus
ENSORLG00015003916MSI110098.567ENSXMAG00000018237-10098.567Xiphophorus_maculatus

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