EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015004104 (Gene tree)
Gene ID: -
Gene Symbol: sf3a3
Alias: -
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 5044 bases
Position: chr11:11840336-11845379
Accession: 101175578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023831	SF3a60_bindingd	PF12108.8	1.4e-14	1	1
ENSORLP00015023861	SF3a60_bindingd	PF12108.8	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009486	-	1371	-	ENSORLP00015023831	456 (aa)	-	-
ENSORLT00015009428	-	1937	XM_004074097	ENSORLP00015023861	501 (aa)	XP_004074145	-

Gene Model

Click here to download ENSORLG00015004104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004104	sf3a3	100	89.621	ENSG00000183431	SF3A3	100	89.621	Homo_sapiens
ENSORLG00015004104	sf3a3	100	95.409	ENSAPOG00000015608	sf3a3	100	95.409	Acanthochromis_polyacanthus
ENSORLG00015004104	sf3a3	100	89.621	ENSAMEG00000001262	SF3A3	100	89.621	Ailuropoda_melanoleuca
ENSORLG00015004104	sf3a3	95	88.560	ENSACIG00000009061	sf3a3	99	88.560	Amphilophus_citrinellus
ENSORLG00015004104	sf3a3	100	95.609	ENSAOCG00000013954	sf3a3	100	95.609	Amphiprion_ocellaris
ENSORLG00015004104	sf3a3	100	95.609	ENSAPEG00000007297	sf3a3	100	95.609	Amphiprion_percula
ENSORLG00015004104	sf3a3	100	95.609	ENSATEG00000008754	sf3a3	100	95.609	Anabas_testudineus
ENSORLG00015004104	sf3a3	94	89.765	ENSAPLG00000014900	SF3A3	100	89.765	Anas_platyrhynchos
ENSORLG00015004104	sf3a3	100	88.623	ENSACAG00000017058	SF3A3	100	88.623	Anolis_carolinensis
ENSORLG00015004104	sf3a3	99	86.345	ENSANAG00000014878	SF3A3	100	86.345	Aotus_nancymaae
ENSORLG00015004104	sf3a3	100	69.661	ENSANAG00000036903	-	100	69.661	Aotus_nancymaae
ENSORLG00015004104	sf3a3	100	95.210	ENSACLG00000017977	sf3a3	100	95.210	Astatotilapia_calliptera
ENSORLG00015004104	sf3a3	100	92.016	ENSAMXG00000016855	sf3a3	87	92.016	Astyanax_mexicanus
ENSORLG00015004104	sf3a3	100	89.621	ENSBTAG00000007299	SF3A3	100	89.621	Bos_taurus
ENSORLG00015004104	sf3a3	100	51.889	WBGene00011758	T13H5.4	100	51.889	Caenorhabditis_elegans
ENSORLG00015004104	sf3a3	100	89.621	ENSCJAG00000002176	SF3A3	100	89.621	Callithrix_jacchus
ENSORLG00015004104	sf3a3	100	89.621	ENSCAFG00000000683	-	100	89.621	Canis_familiaris
ENSORLG00015004104	sf3a3	100	89.621	ENSCAFG00000003222	-	100	89.621	Canis_familiaris
ENSORLG00015004104	sf3a3	100	89.621	ENSCAFG00020006186	SF3A3	100	89.621	Canis_lupus_dingo
ENSORLG00015004104	sf3a3	100	89.621	ENSCHIG00000020638	SF3A3	100	89.621	Capra_hircus
ENSORLG00015004104	sf3a3	100	83.633	ENSTSYG00000008417	SF3A3	100	83.633	Carlito_syrichta
ENSORLG00015004104	sf3a3	85	58.810	ENSCAPG00000003466	SF3A3	100	56.064	Cavia_aperea
ENSORLG00015004104	sf3a3	100	89.820	ENSCPOG00000008660	SF3A3	100	89.820	Cavia_porcellus
ENSORLG00015004104	sf3a3	100	89.621	ENSCCAG00000033732	SF3A3	100	89.621	Cebus_capucinus
ENSORLG00015004104	sf3a3	100	64.811	ENSCCAG00000034048	-	100	61.829	Cebus_capucinus
ENSORLG00015004104	sf3a3	100	67.131	ENSCATG00000043537	-	100	67.729	Cercocebus_atys
ENSORLG00015004104	sf3a3	100	89.621	ENSCATG00000043496	SF3A3	100	89.621	Cercocebus_atys
ENSORLG00015004104	sf3a3	94	72.495	ENSCATG00000041660	-	100	73.987	Cercocebus_atys
ENSORLG00015004104	sf3a3	100	90.220	ENSCLAG00000010838	SF3A3	100	90.220	Chinchilla_lanigera
ENSORLG00015004104	sf3a3	95	89.076	ENSCSAG00000001120	SF3A3	100	89.076	Chlorocebus_sabaeus
ENSORLG00015004104	sf3a3	86	86.243	ENSCHOG00000006849	SF3A3	80	86.243	Choloepus_hoffmanni
ENSORLG00015004104	sf3a3	70	59.834	ENSCPBG00000007472	-	95	59.834	Chrysemys_picta_bellii
ENSORLG00015004104	sf3a3	100	81.836	ENSCPBG00000018291	-	100	81.836	Chrysemys_picta_bellii
ENSORLG00015004104	sf3a3	100	67.131	ENSCING00000002730	-	100	67.131	Ciona_intestinalis
ENSORLG00015004104	sf3a3	100	65.868	ENSCSAVG00000005063	-	100	65.868	Ciona_savignyi
ENSORLG00015004104	sf3a3	100	89.621	ENSCANG00000042083	SF3A3	100	89.621	Colobus_angolensis_palliatus
ENSORLG00015004104	sf3a3	100	64.671	ENSCANG00000035535	-	100	64.671	Colobus_angolensis_palliatus
ENSORLG00015004104	sf3a3	100	90.419	ENSCGRG00001011320	Sf3a3	100	90.419	Cricetulus_griseus_chok1gshd
ENSORLG00015004104	sf3a3	100	90.419	ENSCGRG00000012156	Sf3a3	100	90.419	Cricetulus_griseus_crigri
ENSORLG00015004104	sf3a3	100	93.613	ENSCSEG00000010401	sf3a3	100	93.613	Cynoglossus_semilaevis
ENSORLG00015004104	sf3a3	94	94.243	ENSCVAG00000010239	sf3a3	95	94.243	Cyprinodon_variegatus
ENSORLG00015004104	sf3a3	100	92.016	ENSDARG00000100114	sf3a3	100	92.363	Danio_rerio
ENSORLG00015004104	sf3a3	91	89.059	ENSDNOG00000046628	SF3A3	99	89.059	Dasypus_novemcinctus
ENSORLG00015004104	sf3a3	100	89.820	ENSDORG00000008798	Sf3a3	100	89.820	Dipodomys_ordii
ENSORLG00015004104	sf3a3	100	64.032	FBgn0014366	noi	100	63.834	Drosophila_melanogaster
ENSORLG00015004104	sf3a3	100	77.137	ENSEBUG00000015411	sf3a3	92	77.535	Eptatretus_burgeri
ENSORLG00015004104	sf3a3	100	89.621	ENSEASG00005012906	SF3A3	100	89.621	Equus_asinus_asinus
ENSORLG00015004104	sf3a3	100	89.621	ENSECAG00000017333	SF3A3	100	89.621	Equus_caballus
ENSORLG00015004104	sf3a3	100	91.417	ENSELUG00000010024	sf3a3	100	91.417	Esox_lucius
ENSORLG00015004104	sf3a3	100	89.621	ENSFCAG00000027772	SF3A3	100	89.621	Felis_catus
ENSORLG00015004104	sf3a3	100	89.222	ENSFALG00000001003	SF3A3	100	89.222	Ficedula_albicollis
ENSORLG00015004104	sf3a3	100	89.820	ENSFDAG00000020908	SF3A3	100	89.820	Fukomys_damarensis
ENSORLG00015004104	sf3a3	100	95.808	ENSFHEG00000019107	sf3a3	100	95.808	Fundulus_heteroclitus
ENSORLG00015004104	sf3a3	100	91.018	ENSGMOG00000015540	sf3a3	100	91.018	Gadus_morhua
ENSORLG00015004104	sf3a3	100	89.022	ENSGALG00000001540	SF3A3	100	89.022	Gallus_gallus
ENSORLG00015004104	sf3a3	100	95.609	ENSGAFG00000002320	sf3a3	100	95.609	Gambusia_affinis
ENSORLG00015004104	sf3a3	100	94.212	ENSGACG00000007842	sf3a3	100	94.212	Gasterosteus_aculeatus
ENSORLG00015004104	sf3a3	100	89.621	ENSGAGG00000014980	SF3A3	100	89.621	Gopherus_agassizii
ENSORLG00015004104	sf3a3	100	69.261	ENSGGOG00000022611	-	100	68.862	Gorilla_gorilla
ENSORLG00015004104	sf3a3	100	89.621	ENSGGOG00000013928	SF3A3	100	89.621	Gorilla_gorilla
ENSORLG00015004104	sf3a3	100	95.210	ENSHBUG00000018158	sf3a3	100	95.395	Haplochromis_burtoni
ENSORLG00015004104	sf3a3	100	90.020	ENSHGLG00000012502	SF3A3	100	90.020	Heterocephalus_glaber_female
ENSORLG00015004104	sf3a3	100	90.020	ENSHGLG00100010546	SF3A3	100	90.020	Heterocephalus_glaber_male
ENSORLG00015004104	sf3a3	100	92.615	ENSHCOG00000015109	sf3a3	100	92.615	Hippocampus_comes
ENSORLG00015004104	sf3a3	100	92.016	ENSIPUG00000011603	sf3a3	100	92.016	Ictalurus_punctatus
ENSORLG00015004104	sf3a3	100	90.220	ENSSTOG00000001691	SF3A3	100	90.220	Ictidomys_tridecemlineatus
ENSORLG00015004104	sf3a3	100	90.020	ENSJJAG00000012404	Sf3a3	100	90.020	Jaculus_jaculus
ENSORLG00015004104	sf3a3	100	96.008	ENSKMAG00000007632	sf3a3	100	96.008	Kryptolebias_marmoratus
ENSORLG00015004104	sf3a3	100	86.454	ENSLBEG00000000816	sf3a3	100	86.905	Labrus_bergylta
ENSORLG00015004104	sf3a3	100	92.016	ENSLOCG00000003273	sf3a3	100	92.016	Lepisosteus_oculatus
ENSORLG00015004104	sf3a3	100	78.443	ENSLAFG00000008094	SF3A3	100	78.443	Loxodonta_africana
ENSORLG00015004104	sf3a3	100	89.621	ENSMFAG00000043047	SF3A3	100	89.621	Macaca_fascicularis
ENSORLG00015004104	sf3a3	94	71.429	ENSMFAG00000036706	-	100	73.134	Macaca_fascicularis
ENSORLG00015004104	sf3a3	100	89.621	ENSMMUG00000023199	SF3A3	100	89.621	Macaca_mulatta
ENSORLG00015004104	sf3a3	100	70.459	ENSMMUG00000038820	-	100	72.056	Macaca_mulatta
ENSORLG00015004104	sf3a3	100	89.621	ENSMNEG00000044291	SF3A3	100	89.621	Macaca_nemestrina
ENSORLG00015004104	sf3a3	94	69.510	ENSMNEG00000028686	-	100	71.215	Macaca_nemestrina
ENSORLG00015004104	sf3a3	100	66.534	ENSMLEG00000028631	-	100	67.131	Mandrillus_leucophaeus
ENSORLG00015004104	sf3a3	100	74.651	ENSMLEG00000036714	-	100	76.048	Mandrillus_leucophaeus
ENSORLG00015004104	sf3a3	100	89.621	ENSMLEG00000030641	SF3A3	100	89.621	Mandrillus_leucophaeus
ENSORLG00015004104	sf3a3	100	95.409	ENSMAMG00000001942	sf3a3	100	95.409	Mastacembelus_armatus
ENSORLG00015004104	sf3a3	100	95.210	ENSMZEG00005016987	sf3a3	100	95.210	Maylandia_zebra
ENSORLG00015004104	sf3a3	100	84.493	ENSMGAG00000002875	SF3A3	100	84.493	Meleagris_gallopavo
ENSORLG00015004104	sf3a3	91	87.336	ENSMICG00000026541	-	100	87.336	Microcebus_murinus
ENSORLG00015004104	sf3a3	100	84.431	ENSMICG00000043548	-	100	84.431	Microcebus_murinus
ENSORLG00015004104	sf3a3	100	86.028	ENSMICG00000001485	-	100	86.028	Microcebus_murinus
ENSORLG00015004104	sf3a3	100	88.224	ENSMOCG00000019939	-	100	88.224	Microtus_ochrogaster
ENSORLG00015004104	sf3a3	95	84.421	ENSMOCG00000014565	-	97	83.158	Microtus_ochrogaster
ENSORLG00015004104	sf3a3	100	94.810	ENSMMOG00000014307	sf3a3	100	94.810	Mola_mola
ENSORLG00015004104	sf3a3	100	70.485	ENSMODG00000017729	-	100	69.498	Monodelphis_domestica
ENSORLG00015004104	sf3a3	100	83.234	ENSMODG00000024045	-	100	83.234	Monodelphis_domestica
ENSORLG00015004104	sf3a3	100	94.611	ENSMALG00000004836	sf3a3	100	94.956	Monopterus_albus
ENSORLG00015004104	sf3a3	100	90.419	MGP_CAROLIEiJ_G0026449	Sf3a3	100	90.419	Mus_caroli
ENSORLG00015004104	sf3a3	100	90.419	ENSMUSG00000028902	Sf3a3	100	90.419	Mus_musculus
ENSORLG00015004104	sf3a3	100	85.030	MGP_PahariEiJ_G0028780	Sf3a3	100	85.030	Mus_pahari
ENSORLG00015004104	sf3a3	100	90.419	MGP_SPRETEiJ_G0027428	Sf3a3	100	90.419	Mus_spretus
ENSORLG00015004104	sf3a3	100	89.621	ENSMLUG00000000991	SF3A3	100	89.621	Myotis_lucifugus
ENSORLG00015004104	sf3a3	100	85.629	ENSNGAG00000018032	Sf3a3	100	85.629	Nannospalax_galili
ENSORLG00015004104	sf3a3	100	82.236	ENSNLEG00000011720	SF3A3	100	82.236	Nomascus_leucogenys
ENSORLG00015004104	sf3a3	100	90.020	ENSOPRG00000012785	SF3A3	100	90.020	Ochotona_princeps
ENSORLG00015004104	sf3a3	100	84.631	ENSODEG00000006854	-	100	87.226	Octodon_degus
ENSORLG00015004104	sf3a3	100	86.228	ENSODEG00000007470	-	100	86.228	Octodon_degus
ENSORLG00015004104	sf3a3	100	78.443	ENSODEG00000018393	-	100	78.244	Octodon_degus
ENSORLG00015004104	sf3a3	100	76.096	ENSODEG00000000937	-	100	78.486	Octodon_degus
ENSORLG00015004104	sf3a3	87	95.632	ENSONIG00000010296	sf3a3	100	95.632	Oreochromis_niloticus
ENSORLG00015004104	sf3a3	94	89.552	ENSOANG00000002473	SF3A3	100	89.552	Ornithorhynchus_anatinus
ENSORLG00015004104	sf3a3	100	90.020	ENSOCUG00000005407	SF3A3	100	90.020	Oryctolagus_cuniculus
ENSORLG00015004104	sf3a3	100	99.601	ENSORLG00000008175	sf3a3	100	99.601	Oryzias_latipes
ENSORLG00015004104	sf3a3	100	99.401	ENSORLG00020013708	sf3a3	100	99.401	Oryzias_latipes_hni
ENSORLG00015004104	sf3a3	100	98.204	ENSOMEG00000020177	sf3a3	100	98.204	Oryzias_melastigma
ENSORLG00015004104	sf3a3	100	89.621	ENSOARG00000019950	SF3A3	100	89.621	Ovis_aries
ENSORLG00015004104	sf3a3	100	68.663	ENSPPAG00000039955	-	100	68.263	Pan_paniscus
ENSORLG00015004104	sf3a3	100	89.621	ENSPPAG00000034066	SF3A3	100	89.621	Pan_paniscus
ENSORLG00015004104	sf3a3	100	89.621	ENSPPRG00000001258	SF3A3	100	89.621	Panthera_pardus
ENSORLG00015004104	sf3a3	100	89.621	ENSPTIG00000007515	SF3A3	100	89.621	Panthera_tigris_altaica
ENSORLG00015004104	sf3a3	100	89.621	ENSPTRG00000000559	SF3A3	100	89.621	Pan_troglodytes
ENSORLG00015004104	sf3a3	100	69.661	ENSPTRG00000046013	-	100	69.261	Pan_troglodytes
ENSORLG00015004104	sf3a3	100	77.046	ENSPANG00000029393	-	100	78.443	Papio_anubis
ENSORLG00015004104	sf3a3	100	89.621	ENSPANG00000021859	SF3A3	100	89.621	Papio_anubis
ENSORLG00015004104	sf3a3	87	81.818	ENSPANG00000031214	-	100	65.070	Papio_anubis
ENSORLG00015004104	sf3a3	100	92.016	ENSPKIG00000004719	sf3a3	100	92.016	Paramormyrops_kingsleyae
ENSORLG00015004104	sf3a3	100	87.475	ENSPSIG00000004273	SF3A3	100	87.475	Pelodiscus_sinensis
ENSORLG00015004104	sf3a3	91	94.311	ENSPMGG00000003610	sf3a3	94	94.311	Periophthalmus_magnuspinnatus
ENSORLG00015004104	sf3a3	100	90.419	ENSPEMG00000020805	Sf3a3	100	90.419	Peromyscus_maniculatus_bairdii
ENSORLG00015004104	sf3a3	54	75.926	ENSPMAG00000001044	sf3a3	98	75.926	Petromyzon_marinus
ENSORLG00015004104	sf3a3	100	89.820	ENSPCIG00000025719	SF3A3	100	89.820	Phascolarctos_cinereus
ENSORLG00015004104	sf3a3	100	95.808	ENSPFOG00000005284	sf3a3	100	95.808	Poecilia_formosa
ENSORLG00015004104	sf3a3	99	92.555	ENSPLAG00000003979	sf3a3	92	92.555	Poecilia_latipinna
ENSORLG00015004104	sf3a3	78	90.840	ENSPMEG00000021132	sf3a3	88	90.840	Poecilia_mexicana
ENSORLG00015004104	sf3a3	100	95.808	ENSPREG00000013802	sf3a3	100	95.808	Poecilia_reticulata
ENSORLG00015004104	sf3a3	100	87.226	ENSPPYG00000001519	SF3A3	100	87.226	Pongo_abelii
ENSORLG00015004104	sf3a3	100	83.433	ENSPCAG00000010734	SF3A3	100	83.433	Procavia_capensis
ENSORLG00015004104	sf3a3	100	78.649	ENSPCOG00000017131	-	100	78.649	Propithecus_coquereli
ENSORLG00015004104	sf3a3	100	78.926	ENSPCOG00000020389	-	100	79.324	Propithecus_coquereli
ENSORLG00015004104	sf3a3	93	95.767	ENSPVAG00000010158	SF3A3	85	95.767	Pteropus_vampyrus
ENSORLG00015004104	sf3a3	100	95.210	ENSPNYG00000000786	sf3a3	100	95.210	Pundamilia_nyererei
ENSORLG00015004104	sf3a3	100	92.415	ENSPNAG00000010298	sf3a3	100	92.415	Pygocentrus_nattereri
ENSORLG00015004104	sf3a3	100	90.419	ENSRNOG00000007629	Sf3a3	100	90.419	Rattus_norvegicus
ENSORLG00015004104	sf3a3	100	66.667	ENSRBIG00000041123	-	100	66.667	Rhinopithecus_bieti
ENSORLG00015004104	sf3a3	100	89.621	ENSRBIG00000043567	SF3A3	100	89.621	Rhinopithecus_bieti
ENSORLG00015004104	sf3a3	100	66.267	ENSRBIG00000043833	-	100	66.267	Rhinopithecus_bieti
ENSORLG00015004104	sf3a3	100	89.621	ENSRROG00000033888	SF3A3	100	89.621	Rhinopithecus_roxellana
ENSORLG00015004104	sf3a3	94	71.002	ENSRROG00000032346	-	100	71.002	Rhinopithecus_roxellana
ENSORLG00015004104	sf3a3	100	65.070	ENSSBOG00000026932	-	100	64.072	Saimiri_boliviensis_boliviensis
ENSORLG00015004104	sf3a3	83	92.744	ENSSBOG00000032688	SF3A3	100	92.453	Saimiri_boliviensis_boliviensis
ENSORLG00015004104	sf3a3	90	90.066	ENSSHAG00000014530	SF3A3	100	90.066	Sarcophilus_harrisii
ENSORLG00015004104	sf3a3	100	94.012	ENSSFOG00015005975	sf3a3	100	94.012	Scleropages_formosus
ENSORLG00015004104	sf3a3	100	95.010	ENSSMAG00000020213	sf3a3	100	95.010	Scophthalmus_maximus
ENSORLG00015004104	sf3a3	100	91.417	ENSSDUG00000011590	sf3a3	100	91.417	Seriola_dumerili
ENSORLG00015004104	sf3a3	100	95.808	ENSSLDG00000020635	sf3a3	100	95.808	Seriola_lalandi_dorsalis
ENSORLG00015004104	sf3a3	100	89.222	ENSSPUG00000004010	SF3A3	100	89.222	Sphenodon_punctatus
ENSORLG00015004104	sf3a3	100	95.808	ENSSPAG00000018653	sf3a3	100	95.808	Stegastes_partitus
ENSORLG00015004104	sf3a3	100	89.621	ENSSSCG00000003643	SF3A3	100	89.621	Sus_scrofa
ENSORLG00015004104	sf3a3	87	90.115	ENSTGUG00000001466	SF3A3	99	90.115	Taeniopygia_guttata
ENSORLG00015004104	sf3a3	100	94.411	ENSTRUG00000009089	sf3a3	100	94.411	Takifugu_rubripes
ENSORLG00015004104	sf3a3	100	94.036	ENSTNIG00000009800	sf3a3	100	94.036	Tetraodon_nigroviridis
ENSORLG00015004104	sf3a3	100	78.443	ENSTBEG00000007614	SF3A3	100	78.443	Tupaia_belangeri
ENSORLG00015004104	sf3a3	100	89.421	ENSTTRG00000013519	SF3A3	100	89.421	Tursiops_truncatus
ENSORLG00015004104	sf3a3	100	89.621	ENSUAMG00000006134	SF3A3	100	89.621	Ursus_americanus
ENSORLG00015004104	sf3a3	100	89.621	ENSUMAG00000021250	SF3A3	100	89.621	Ursus_maritimus
ENSORLG00015004104	sf3a3	66	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSORLG00015004104	sf3a3	100	85.828	ENSVVUG00000022908	SF3A3	100	85.828	Vulpes_vulpes
ENSORLG00015004104	sf3a3	100	87.824	ENSXETG00000022923	sf3a3	100	87.824	Xenopus_tropicalis
ENSORLG00015004104	sf3a3	100	95.609	ENSXMAG00000017165	sf3a3	100	95.609	Xiphophorus_maculatus