EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015004126 (Gene tree)
Gene ID
-
Gene Symbol
hdlbpa
Alias
-
Full Name
high density lipoprotein binding protein a
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
19638 bases
Position
chr4:4442301-4461938
Accession
ZDB-GENE-030131-2032
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015003352KH_1PF00013.291.2e-182114
ENSORLP00015003352KH_1PF00013.291.2e-182214
ENSORLP00015003352KH_1PF00013.291.2e-182314
ENSORLP00015003352KH_1PF00013.291.2e-182414
ENSORLP00015003352KH_1PF00013.291.2e-182514
ENSORLP00015003352KH_1PF00013.291.2e-182614
ENSORLP00015003352KH_1PF00013.291.2e-182714
ENSORLP00015003352KH_1PF00013.291.2e-182814
ENSORLP00015003352KH_1PF00013.291.2e-182914
ENSORLP00015003352KH_1PF00013.291.2e-1821014
ENSORLP00015003352KH_1PF00013.291.2e-1821114
ENSORLP00015003352KH_1PF00013.291.2e-1821214
ENSORLP00015003352KH_1PF00013.291.2e-1821314
ENSORLP00015003352KH_1PF00013.291.2e-1821414
ENSORLP00015003326KH_1PF00013.292.2e-176113
ENSORLP00015003326KH_1PF00013.292.2e-176213
ENSORLP00015003326KH_1PF00013.292.2e-176313
ENSORLP00015003326KH_1PF00013.292.2e-176413
ENSORLP00015003326KH_1PF00013.292.2e-176513
ENSORLP00015003326KH_1PF00013.292.2e-176613
ENSORLP00015003326KH_1PF00013.292.2e-176713
ENSORLP00015003326KH_1PF00013.292.2e-176813
ENSORLP00015003326KH_1PF00013.292.2e-176913
ENSORLP00015003326KH_1PF00013.292.2e-1761013
ENSORLP00015003326KH_1PF00013.292.2e-1761113
ENSORLP00015003326KH_1PF00013.292.2e-1761213
ENSORLP00015003326KH_1PF00013.292.2e-1761313
ENSORLP00015003267KH_1PF00013.296.9e-169113
ENSORLP00015003267KH_1PF00013.296.9e-169213
ENSORLP00015003267KH_1PF00013.296.9e-169313
ENSORLP00015003267KH_1PF00013.296.9e-169413
ENSORLP00015003267KH_1PF00013.296.9e-169513
ENSORLP00015003267KH_1PF00013.296.9e-169613
ENSORLP00015003267KH_1PF00013.296.9e-169713
ENSORLP00015003267KH_1PF00013.296.9e-169813
ENSORLP00015003267KH_1PF00013.296.9e-169913
ENSORLP00015003267KH_1PF00013.296.9e-1691013
ENSORLP00015003267KH_1PF00013.296.9e-1691113
ENSORLP00015003267KH_1PF00013.296.9e-1691213
ENSORLP00015003267KH_1PF00013.296.9e-1691313
ENSORLP00015003239KH_1PF00013.291.1e-8316
ENSORLP00015003239KH_1PF00013.291.1e-8326
ENSORLP00015003239KH_1PF00013.291.1e-8336
ENSORLP00015003239KH_1PF00013.291.1e-8346
ENSORLP00015003239KH_1PF00013.291.1e-8356
ENSORLP00015003239KH_1PF00013.291.1e-8366
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015009483-8175-ENSORLP000150033261235 (aa)--
ENSORLT00015009414-8310-ENSORLP000150033521280 (aa)--
ENSORLT00015009620-1965-ENSORLP00015003239654 (aa)--
ENSORLT00015009564-8091-ENSORLP000150032671207 (aa)--
Gene Model
Click here to download ENSORLG00015004126's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004126's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015004126hdlbpa10070.983ENSORLG00015006863hdlbpb10071.217
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015004126hdlbpa9978.227ENSG00000115677HDLBP9883.071Homo_sapiens
ENSORLG00015004126hdlbpa10093.370ENSAPOG00000012609hdlbpa10093.448Acanthochromis_polyacanthus
ENSORLG00015004126hdlbpa9978.288ENSAMEG00000016552HDLBP10078.288Ailuropoda_melanoleuca
ENSORLG00015004126hdlbpa10091.105ENSACIG00000006015hdlbpa10091.105Amphilophus_citrinellus
ENSORLG00015004126hdlbpa10093.682ENSAOCG00000000300hdlbpa10093.760Amphiprion_ocellaris
ENSORLG00015004126hdlbpa10093.682ENSAPEG00000000522hdlbpa10093.760Amphiprion_percula
ENSORLG00015004126hdlbpa10092.668ENSATEG00000009748hdlbpa10092.512Anabas_testudineus
ENSORLG00015004126hdlbpa9979.128ENSACAG00000001556HDLBP10079.128Anolis_carolinensis
ENSORLG00015004126hdlbpa9977.821ENSANAG00000020545HDLBP9881.475Aotus_nancymaae
ENSORLG00015004126hdlbpa10092.278ENSACLG00000025965hdlbpa10092.278Astatotilapia_calliptera
ENSORLG00015004126hdlbpa9390.572ENSAMXG00000004221hdlbpa10090.404Astyanax_mexicanus
ENSORLG00015004126hdlbpa9977.605ENSBTAG00000004315HDLBP10077.605Bos_taurus
ENSORLG00015004126hdlbpa9977.933ENSCJAG00000006152HDLBP10077.933Callithrix_jacchus
ENSORLG00015004126hdlbpa9978.132ENSCAFG00000012913HDLBP10078.925Canis_familiaris
ENSORLG00015004126hdlbpa9978.132ENSCAFG00020025089HDLBP10078.132Canis_lupus_dingo
ENSORLG00015004126hdlbpa9977.510ENSCHIG00000022364HDLBP10077.510Capra_hircus
ENSORLG00015004126hdlbpa9977.665ENSTSYG00000002379HDLBP10077.665Carlito_syrichta
ENSORLG00015004126hdlbpa9975.332ENSCAPG00000008584HDLBP10075.332Cavia_aperea
ENSORLG00015004126hdlbpa9978.159ENSCPOG00000006297HDLBP10078.159Cavia_porcellus
ENSORLG00015004126hdlbpa9162.826ENSCCAG00000037920-10062.826Cebus_capucinus
ENSORLG00015004126hdlbpa9977.977ENSCCAG00000023361-10077.977Cebus_capucinus
ENSORLG00015004126hdlbpa9978.066ENSCATG00000039363HDLBP10077.977Cercocebus_atys
ENSORLG00015004126hdlbpa9978.159ENSCLAG00000002365HDLBP10078.159Chinchilla_lanigera
ENSORLG00015004126hdlbpa9977.248ENSCSAG00000005781HDLBP10077.248Chlorocebus_sabaeus
ENSORLG00015004126hdlbpa8868.056ENSCHOG00000003882-9468.056Choloepus_hoffmanni
ENSORLG00015004126hdlbpa9979.201ENSCPBG00000002442HDLBP10079.201Chrysemys_picta_bellii
ENSORLG00015004126hdlbpa9978.132ENSCANG00000033571HDLBP10078.132Colobus_angolensis_palliatus
ENSORLG00015004126hdlbpa9042.798ENSCGRG000010105704921511C20Rik10042.798Cricetulus_griseus_chok1gshd
ENSORLG00015004126hdlbpa9978.054ENSCGRG00001006086Hdlbp10078.054Cricetulus_griseus_chok1gshd
ENSORLG00015004126hdlbpa9644.720ENSCGRG00000015720Gm3829744.397Cricetulus_griseus_crigri
ENSORLG00015004126hdlbpa9978.054ENSCGRG00000014444Hdlbp10078.054Cricetulus_griseus_crigri
ENSORLG00015004126hdlbpa10091.257ENSCSEG00000008853hdlbpa10091.023Cynoglossus_semilaevis
ENSORLG00015004126hdlbpa10091.881ENSCVAG00000017892hdlbpa10091.647Cyprinodon_variegatus
ENSORLG00015004126hdlbpa10088.162ENSDARG00000009830hdlbpa10089.171Danio_rerio
ENSORLG00015004126hdlbpa9976.238ENSDNOG00000006753HDLBP10076.238Dasypus_novemcinctus
ENSORLG00015004126hdlbpa9777.291ENSETEG00000005416-7977.291Echinops_telfairi
ENSORLG00015004126hdlbpa9978.305ENSEASG00005008249HDLBP10078.305Equus_asinus_asinus
ENSORLG00015004126hdlbpa9978.305ENSECAG00000012829HDLBP10078.305Equus_caballus
ENSORLG00015004126hdlbpa9948.063ENSECAG00000028723-9948.063Equus_caballus
ENSORLG00015004126hdlbpa9953.026ENSECAG00000030885-9953.026Equus_caballus
ENSORLG00015004126hdlbpa9468.081ENSEEUG00000014648HDLBP10068.081Erinaceus_europaeus
ENSORLG00015004126hdlbpa10086.769ENSELUG00000010700hdlbpa10086.493Esox_lucius
ENSORLG00015004126hdlbpa9978.054ENSFCAG00000010455HDLBP10078.054Felis_catus
ENSORLG00015004126hdlbpa9979.829ENSFALG00000003437HDLBP10080.140Ficedula_albicollis
ENSORLG00015004126hdlbpa9978.176ENSFDAG00000000456HDLBP10078.176Fukomys_damarensis
ENSORLG00015004126hdlbpa10091.966ENSFHEG00000004848hdlbpa10092.044Fundulus_heteroclitus
ENSORLG00015004126hdlbpa10086.547ENSGMOG00000009932hdlbpa10086.470Gadus_morhua
ENSORLG00015004126hdlbpa9979.907ENSGALG00000005823HDLBP10080.140Gallus_gallus
ENSORLG00015004126hdlbpa9887.695ENSGAFG00000016766hdlbpa9487.695Gambusia_affinis
ENSORLG00015004126hdlbpa10088.309ENSGACG00000004648hdlbpa10088.231Gasterosteus_aculeatus
ENSORLG00015004126hdlbpa9980.218ENSGAGG00000004256HDLBP10080.140Gopherus_agassizii
ENSORLG00015004126hdlbpa9978.227ENSGGOG00000004392HDLBP9979.235Gorilla_gorilla
ENSORLG00015004126hdlbpa10092.434ENSHBUG00000001136hdlbpa10092.434Haplochromis_burtoni
ENSORLG00015004126hdlbpa9977.786ENSHGLG00000004910HDLBP10077.786Heterocephalus_glaber_female
ENSORLG00015004126hdlbpa9977.786ENSHGLG00100013326HDLBP10077.786Heterocephalus_glaber_male
ENSORLG00015004126hdlbpa10089.977ENSHCOG00000014837hdlbpa10089.744Hippocampus_comes
ENSORLG00015004126hdlbpa10088.467ENSIPUG00000013088hdlbp10088.313Ictalurus_punctatus
ENSORLG00015004126hdlbpa8477.455ENSIPUG00000013177-9376.727Ictalurus_punctatus
ENSORLG00015004126hdlbpa9977.708ENSSTOG00000013331HDLBP10078.176Ictidomys_tridecemlineatus
ENSORLG00015004126hdlbpa9978.538ENSJJAG00000003596Hdlbp10078.538Jaculus_jaculus
ENSORLG00015004126hdlbpa8940.854ENSJJAG00000013712-9340.854Jaculus_jaculus
ENSORLG00015004126hdlbpa10090.710ENSKMAG00000007571hdlbpa10090.710Kryptolebias_marmoratus
ENSORLG00015004126hdlbpa10090.994ENSLBEG00000027461hdlbpa10090.994Labrus_bergylta
ENSORLG00015004126hdlbpa10082.775ENSLACG00000003592HDLBP10082.775Latimeria_chalumnae
ENSORLG00015004126hdlbpa10086.895ENSLOCG00000006278hdlbpa10086.817Lepisosteus_oculatus
ENSORLG00015004126hdlbpa9978.072ENSLAFG00000014826HDLBP10078.072Loxodonta_africana
ENSORLG00015004126hdlbpa9977.977ENSMFAG00000033641HDLBP10077.977Macaca_fascicularis
ENSORLG00015004126hdlbpa9977.994ENSMMUG00000004730HDLBP10077.994Macaca_mulatta
ENSORLG00015004126hdlbpa9977.977ENSMNEG00000024260HDLBP10077.977Macaca_nemestrina
ENSORLG00015004126hdlbpa9977.977ENSMLEG00000042734HDLBP10077.977Mandrillus_leucophaeus
ENSORLG00015004126hdlbpa10092.512ENSMAMG00000008611hdlbpa10092.434Mastacembelus_armatus
ENSORLG00015004126hdlbpa10092.278ENSMZEG00005009513hdlbpa10092.278Maylandia_zebra
ENSORLG00015004126hdlbpa9977.726ENSMGAG00000003686HDLBP10081.326Meleagris_gallopavo
ENSORLG00015004126hdlbpa9978.210ENSMAUG00000017743Hdlbp10078.210Mesocricetus_auratus
ENSORLG00015004126hdlbpa9978.288ENSMICG00000004569HDLBP10078.460Microcebus_murinus
ENSORLG00015004126hdlbpa9978.288ENSMOCG00000006679Hdlbp10078.288Microtus_ochrogaster
ENSORLG00015004126hdlbpa9886.800ENSMMOG00000006880hdlbpa9986.720Mola_mola
ENSORLG00015004126hdlbpa9977.915ENSMODG00000016033HDLBP10077.915Monodelphis_domestica
ENSORLG00015004126hdlbpa10091.803ENSMALG00000015095hdlbpa10092.037Monopterus_albus
ENSORLG00015004126hdlbpa9978.210MGP_CAROLIEiJ_G0014456Hdlbp10078.210Mus_caroli
ENSORLG00015004126hdlbpa9041.201MGP_CAROLIEiJ_G00333744921511C20Rik10041.201Mus_caroli
ENSORLG00015004126hdlbpa9444.408MGP_CAROLIEiJ_G0033373Gm3829544.297Mus_caroli
ENSORLG00015004126hdlbpa9041.201ENSMUSG000000498154921511C20Rik10041.408Mus_musculus
ENSORLG00015004126hdlbpa9978.210ENSMUSG00000034088Hdlbp10078.210Mus_musculus
ENSORLG00015004126hdlbpa9543.252ENSMUSG00000062791Gm3829643.031Mus_musculus
ENSORLG00015004126hdlbpa8941.615MGP_PahariEiJ_G00319144921511C20Rik10041.615Mus_pahari
ENSORLG00015004126hdlbpa9443.594MGP_PahariEiJ_G0031913Gm3829444.176Mus_pahari
ENSORLG00015004126hdlbpa9978.132MGP_PahariEiJ_G0027692Hdlbp10078.132Mus_pahari
ENSORLG00015004126hdlbpa9543.978MGP_SPRETEiJ_G0034538Gm3829643.757Mus_spretus
ENSORLG00015004126hdlbpa9041.201MGP_SPRETEiJ_G00345394921511C20Rik10041.201Mus_spretus
ENSORLG00015004126hdlbpa9978.210MGP_SPRETEiJ_G0015260Hdlbp10078.210Mus_spretus
ENSORLG00015004126hdlbpa9978.227ENSMPUG00000000163HDLBP10078.227Mustela_putorius_furo
ENSORLG00015004126hdlbpa9978.254ENSMLUG00000005628HDLBP10078.254Myotis_lucifugus
ENSORLG00015004126hdlbpa9978.616ENSNGAG00000014873Hdlbp10078.616Nannospalax_galili
ENSORLG00015004126hdlbpa9892.601ENSNBRG00000000051hdlbpa9992.601Neolamprologus_brichardi
ENSORLG00015004126hdlbpa9977.899ENSNLEG00000013818HDLBP9980.494Nomascus_leucogenys
ENSORLG00015004126hdlbpa9474.322ENSNLEG00000031018-9874.322Nomascus_leucogenys
ENSORLG00015004126hdlbpa9984.300ENSMEUG00000008427HDLBP8884.300Notamacropus_eugenii
ENSORLG00015004126hdlbpa9478.755ENSOPRG00000011965-9478.755Ochotona_princeps
ENSORLG00015004126hdlbpa9973.479ENSODEG00000017391-10073.479Octodon_degus
ENSORLG00015004126hdlbpa9977.691ENSODEG00000012313-10077.691Octodon_degus
ENSORLG00015004126hdlbpa10092.044ENSONIG00000019272hdlbpa10092.044Oreochromis_niloticus
ENSORLG00015004126hdlbpa5988.732ENSOANG00000021864-10088.732Ornithorhynchus_anatinus
ENSORLG00015004126hdlbpa9979.189ENSOANG00000011759-10079.111Ornithorhynchus_anatinus
ENSORLG00015004126hdlbpa9978.227ENSOCUG00000012667HDLBP10078.227Oryctolagus_cuniculus
ENSORLG00015004126hdlbpa10099.453ENSORLG00000002226hdlbpa10099.453Oryzias_latipes
ENSORLG00015004126hdlbpa10099.453ENSORLG00020007905hdlbpa10099.453Oryzias_latipes_hni
ENSORLG00015004126hdlbpa10094.297ENSOMEG00000000247hdlbpa10094.297Oryzias_melastigma
ENSORLG00015004126hdlbpa9977.510ENSOGAG00000000738HDLBP10077.510Otolemur_garnettii
ENSORLG00015004126hdlbpa9975.851ENSOARG00000017870HDLBP10075.851Ovis_aries
ENSORLG00015004126hdlbpa9881.311ENSPPAG00000023318HDLBP9979.235Pan_paniscus
ENSORLG00015004126hdlbpa9978.132ENSPPRG00000010215HDLBP10078.132Panthera_pardus
ENSORLG00015004126hdlbpa9580.750ENSPTIG00000009328HDLBP9780.750Panthera_tigris_altaica
ENSORLG00015004126hdlbpa9881.475ENSPTRG00000013121HDLBP9979.235Pan_troglodytes
ENSORLG00015004126hdlbpa9977.899ENSPANG00000011832HDLBP10077.899Papio_anubis
ENSORLG00015004126hdlbpa10087.891ENSPKIG00000002392hdlbpa10087.656Paramormyrops_kingsleyae
ENSORLG00015004126hdlbpa9481.169ENSPSIG00000010068HDLBP10081.169Pelodiscus_sinensis
ENSORLG00015004126hdlbpa10082.484ENSPMGG00000002102hdlbpa10082.237Periophthalmus_magnuspinnatus
ENSORLG00015004126hdlbpa9978.366ENSPEMG00000017704Hdlbp10078.366Peromyscus_maniculatus_bairdii
ENSORLG00015004126hdlbpa9979.104ENSPCIG00000015375HDLBP9876.277Phascolarctos_cinereus
ENSORLG00015004126hdlbpa10092.356ENSPFOG00000000236hdlbpa10092.122Poecilia_formosa
ENSORLG00015004126hdlbpa9493.506ENSPLAG00000006033hdlbpa10093.605Poecilia_latipinna
ENSORLG00015004126hdlbpa10092.200ENSPMEG00000006627hdlbpa10092.200Poecilia_mexicana
ENSORLG00015004126hdlbpa9393.279ENSPREG00000014450hdlbpa9493.279Poecilia_reticulata
ENSORLG00015004126hdlbpa9977.821ENSPPYG00000013351HDLBP10077.821Pongo_abelii
ENSORLG00015004126hdlbpa9878.489ENSPCAG00000011136HDLBP7973.829Procavia_capensis
ENSORLG00015004126hdlbpa9969.754ENSPCOG00000021622HDLBP10069.754Propithecus_coquereli
ENSORLG00015004126hdlbpa9977.804ENSPVAG00000000555HDLBP10077.804Pteropus_vampyrus
ENSORLG00015004126hdlbpa10092.356ENSPNYG00000020753hdlbpa10092.356Pundamilia_nyererei
ENSORLG00015004126hdlbpa10084.489ENSPNAG00000029610hdlbpa10084.334Pygocentrus_nattereri
ENSORLG00015004126hdlbpa9978.210ENSRNOG00000031479Hdlbp10078.210Rattus_norvegicus
ENSORLG00015004126hdlbpa9341.641ENSRNOG00000042823RGD15612309341.277Rattus_norvegicus
ENSORLG00015004126hdlbpa9643.984ENSRNOG00000031294RGD15631049744.075Rattus_norvegicus
ENSORLG00015004126hdlbpa8941.280ENSRNOG00000028847AABR07040251.110041.150Rattus_norvegicus
ENSORLG00015004126hdlbpa9978.054ENSRBIG00000041381HDLBP10078.054Rhinopithecus_bieti
ENSORLG00015004126hdlbpa9978.054ENSRROG00000034263HDLBP10078.054Rhinopithecus_roxellana
ENSORLG00015004126hdlbpa9269.863ENSSBOG00000033067-9669.863Saimiri_boliviensis_boliviensis
ENSORLG00015004126hdlbpa9977.726ENSSBOG00000029714-9979.508Saimiri_boliviensis_boliviensis
ENSORLG00015004126hdlbpa9978.849ENSSHAG00000012422HDLBP10078.833Sarcophilus_harrisii
ENSORLG00015004126hdlbpa10088.222ENSSFOG00015018627hdlbp10088.125Scleropages_formosus
ENSORLG00015004126hdlbpa10091.247ENSSMAG00000002382hdlbpa10091.325Scophthalmus_maximus
ENSORLG00015004126hdlbpa10093.069ENSSDUG00000022258hdlbpa10092.835Seriola_dumerili
ENSORLG00015004126hdlbpa10092.991ENSSLDG00000004437hdlbpa10092.757Seriola_lalandi_dorsalis
ENSORLG00015004126hdlbpa8771.083ENSSARG00000012639HDLBP8871.083Sorex_araneus
ENSORLG00015004126hdlbpa9978.894ENSSPUG00000009182HDLBP10078.894Sphenodon_punctatus
ENSORLG00015004126hdlbpa10092.751ENSSPAG00000009145hdlbpa10093.141Stegastes_partitus
ENSORLG00015004126hdlbpa9977.276ENSSSCG00000016379HDLBP10077.918Sus_scrofa
ENSORLG00015004126hdlbpa9382.430ENSTGUG00000006189HDLBP10082.430Taeniopygia_guttata
ENSORLG00015004126hdlbpa10089.852ENSTRUG00000012148hdlbpa10089.852Takifugu_rubripes
ENSORLG00015004126hdlbpa9990.055ENSTNIG00000004185hdlbpa10090.055Tetraodon_nigroviridis
ENSORLG00015004126hdlbpa9573.585ENSTBEG00000001860HDLBP8873.585Tupaia_belangeri
ENSORLG00015004126hdlbpa9980.690ENSTTRG00000015251HDLBP7780.690Tursiops_truncatus
ENSORLG00015004126hdlbpa9978.366ENSUAMG00000018383HDLBP9980.844Ursus_americanus
ENSORLG00015004126hdlbpa9978.288ENSUMAG00000010539HDLBP9881.475Ursus_maritimus
ENSORLG00015004126hdlbpa9156.071ENSVPAG00000003112HDLBP9258.544Vicugna_pacos
ENSORLG00015004126hdlbpa9981.475ENSVVUG00000022797HDLBP9981.475Vulpes_vulpes
ENSORLG00015004126hdlbpa9977.432ENSXETG00000012164hdlbp9977.414Xenopus_tropicalis
ENSORLG00015004126hdlbpa10091.257ENSXCOG00000005943hdlbpa10091.257Xiphophorus_couchianus
ENSORLG00015004126hdlbpa10091.453ENSXMAG00000003787hdlbpa10091.453Xiphophorus_maculatus

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