EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015004156 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 8076 bases
Position: chr12:13693122-13701197
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023905	RRM_1	PF00076.22	1.3e-09	1	1
ENSORLP00015003421	RRM_1	PF00076.22	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009323	-	3759	-	ENSORLP00015003421	1252 (aa)	-	-
ENSORLT00015009312	-	3642	-	ENSORLP00015023905	1213 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004156	setd1ba	96	79.083	ENSAPOG00000014731	setd1ba	66	78.571	Acanthochromis_polyacanthus
ENSORLG00015004156	setd1ba	52	59.507	ENSAMEG00000014455	SETD1B	55	46.344	Ailuropoda_melanoleuca
ENSORLG00015004156	setd1ba	98	73.201	ENSACIG00000016453	setd1ba	67	72.533	Amphilophus_citrinellus
ENSORLG00015004156	setd1ba	81	83.941	ENSAOCG00000012148	setd1ba	68	78.947	Amphiprion_ocellaris
ENSORLG00015004156	setd1ba	98	75.000	ENSAPEG00000010762	setd1ba	55	81.009	Amphiprion_percula
ENSORLG00015004156	setd1ba	81	82.440	ENSATEG00000021563	setd1ba	70	77.928	Anabas_testudineus
ENSORLG00015004156	setd1ba	77	56.474	ENSAPLG00000005217	SETD1B	50	54.870	Anas_platyrhynchos
ENSORLG00015004156	setd1ba	81	81.746	ENSACLG00000016584	setd1ba	66	77.659	Astatotilapia_calliptera
ENSORLG00015004156	setd1ba	78	63.222	ENSAMXG00000020648	setd1ba	65	59.250	Astyanax_mexicanus
ENSORLG00015004156	setd1ba	52	59.859	ENSCHIG00000013406	SETD1B	54	51.921	Capra_hircus
ENSORLG00015004156	setd1ba	74	50.891	ENSCATG00000035803	SETD1B	52	51.295	Cercocebus_atys
ENSORLG00015004156	setd1ba	52	55.117	ENSCPBG00000026067	SETD1B	53	55.140	Chrysemys_picta_bellii
ENSORLG00015004156	setd1ba	80	79.032	ENSCSEG00000001458	setd1ba	66	72.116	Cynoglossus_semilaevis
ENSORLG00015004156	setd1ba	81	75.298	ENSCVAG00000022068	setd1ba	65	69.053	Cyprinodon_variegatus
ENSORLG00015004156	setd1ba	81	63.908	ENSDARG00000060847	setd1ba	62	59.011	Danio_rerio
ENSORLG00015004156	setd1ba	60	42.793	ENSDARG00000077244	setd1bb	63	45.736	Danio_rerio
ENSORLG00015004156	setd1ba	81	69.163	ENSELUG00000020846	setd1ba	55	70.126	Esox_lucius
ENSORLG00015004156	setd1ba	73	65.141	ENSFALG00000009136	SETD1B	51	55.261	Ficedula_albicollis
ENSORLG00015004156	setd1ba	81	78.261	ENSFHEG00000013126	setd1ba	67	71.650	Fundulus_heteroclitus
ENSORLG00015004156	setd1ba	52	55.669	ENSGALG00000004324	SETD1B	52	56.215	Gallus_gallus
ENSORLG00015004156	setd1ba	81	77.525	ENSGAFG00000008712	setd1ba	56	76.931	Gambusia_affinis
ENSORLG00015004156	setd1ba	52	54.825	ENSGAGG00000025013	SETD1B	53	54.995	Gopherus_agassizii
ENSORLG00015004156	setd1ba	81	81.647	ENSHBUG00000019992	setd1ba	66	76.733	Haplochromis_burtoni
ENSORLG00015004156	setd1ba	99	72.654	ENSHCOG00000001951	setd1ba	65	72.431	Hippocampus_comes
ENSORLG00015004156	setd1ba	82	59.903	ENSIPUG00000024741	setd1b	55	60.271	Ictalurus_punctatus
ENSORLG00015004156	setd1ba	88	46.465	ENSIPUG00000003992	-	55	47.103	Ictalurus_punctatus
ENSORLG00015004156	setd1ba	81	76.839	ENSKMAG00000007804	setd1ba	54	76.839	Kryptolebias_marmoratus
ENSORLG00015004156	setd1ba	80	76.854	ENSLBEG00000020113	setd1ba	54	75.848	Labrus_bergylta
ENSORLG00015004156	setd1ba	51	64.715	ENSLOCG00000005190	setd1ba	65	55.381	Lepisosteus_oculatus
ENSORLG00015004156	setd1ba	76	50.000	ENSLAFG00000026518	SETD1B	54	50.249	Loxodonta_africana
ENSORLG00015004156	setd1ba	74	49.208	ENSMFAG00000030930	SETD1B	51	51.144	Macaca_fascicularis
ENSORLG00015004156	setd1ba	52	58.803	ENSMLEG00000039573	SETD1B	52	49.453	Mandrillus_leucophaeus
ENSORLG00015004156	setd1ba	99	75.606	ENSMAMG00000011027	setd1ba	66	75.123	Mastacembelus_armatus
ENSORLG00015004156	setd1ba	81	81.746	ENSMZEG00005026617	setd1ba	66	77.659	Maylandia_zebra
ENSORLG00015004156	setd1ba	100	73.120	ENSMMOG00000008190	setd1ba	55	80.396	Mola_mola
ENSORLG00015004156	setd1ba	98	76.046	ENSMALG00000005362	setd1ba	66	75.472	Monopterus_albus
ENSORLG00015004156	setd1ba	82	81.281	ENSNBRG00000002915	setd1ba	64	74.585	Neolamprologus_brichardi
ENSORLG00015004156	setd1ba	70	53.169	ENSNLEG00000001254	SETD1B	56	44.592	Nomascus_leucogenys
ENSORLG00015004156	setd1ba	81	81.610	ENSONIG00000013898	setd1ba	66	77.082	Oreochromis_niloticus
ENSORLG00015004156	setd1ba	100	92.510	ENSORLG00000008435	setd1ba	67	92.510	Oryzias_latipes
ENSORLG00015004156	setd1ba	99	93.161	ENSORLG00020017079	setd1ba	66	93.060	Oryzias_latipes_hni
ENSORLG00015004156	setd1ba	97	91.983	ENSOMEG00000002270	setd1ba	67	91.814	Oryzias_melastigma
ENSORLG00015004156	setd1ba	71	59.507	ENSOGAG00000034809	SETD1B	51	49.952	Otolemur_garnettii
ENSORLG00015004156	setd1ba	76	50.298	ENSPPAG00000043308	SETD1B	53	49.905	Pan_paniscus
ENSORLG00015004156	setd1ba	74	50.101	ENSPPRG00000021041	SETD1B	53	49.703	Panthera_pardus
ENSORLG00015004156	setd1ba	77	74.608	ENSPMGG00000011527	setd1ba	57	71.429	Periophthalmus_magnuspinnatus
ENSORLG00015004156	setd1ba	81	78.248	ENSPFOG00000019768	setd1ba	67	72.295	Poecilia_formosa
ENSORLG00015004156	setd1ba	81	77.044	ENSPLAG00000023459	setd1ba	66	71.405	Poecilia_latipinna
ENSORLG00015004156	setd1ba	81	78.346	ENSPMEG00000020446	setd1ba	67	72.459	Poecilia_mexicana
ENSORLG00015004156	setd1ba	98	72.190	ENSPREG00000011589	setd1ba	67	72.354	Poecilia_reticulata
ENSORLG00015004156	setd1ba	98	73.632	ENSPNYG00000009484	setd1ba	64	74.129	Pundamilia_nyererei
ENSORLG00015004156	setd1ba	81	63.795	ENSPNAG00000016011	setd1ba	68	60.926	Pygocentrus_nattereri
ENSORLG00015004156	setd1ba	76	50.298	ENSRBIG00000034516	SETD1B	55	50.380	Rhinopithecus_bieti
ENSORLG00015004156	setd1ba	85	61.201	ENSSFOG00015015331	setd1ba	57	57.441	Scleropages_formosus
ENSORLG00015004156	setd1ba	99	67.257	ENSSMAG00000001244	setd1ba	53	73.313	Scophthalmus_maximus
ENSORLG00015004156	setd1ba	81	82.725	ENSSDUG00000018313	setd1ba	67	78.465	Seriola_dumerili
ENSORLG00015004156	setd1ba	81	82.725	ENSSLDG00000015543	setd1ba	67	78.389	Seriola_lalandi_dorsalis
ENSORLG00015004156	setd1ba	52	56.041	ENSSPUG00000011847	SETD1B	53	54.722	Sphenodon_punctatus
ENSORLG00015004156	setd1ba	98	77.878	ENSSPAG00000015470	setd1ba	66	77.969	Stegastes_partitus
ENSORLG00015004156	setd1ba	76	53.361	ENSSSCG00000009806	SETD1B	54	54.878	Sus_scrofa
ENSORLG00015004156	setd1ba	51	55.440	ENSTGUG00000006093	-	51	55.398	Taeniopygia_guttata
ENSORLG00015004156	setd1ba	90	70.578	ENSTRUG00000009533	setd1ba	55	76.162	Takifugu_rubripes
ENSORLG00015004156	setd1ba	98	69.699	ENSTNIG00000009090	setd1ba	66	70.579	Tetraodon_nigroviridis
ENSORLG00015004156	setd1ba	81	76.407	ENSXCOG00000004451	setd1ba	65	69.104	Xiphophorus_couchianus
ENSORLG00015004156	setd1ba	81	78.522	ENSXMAG00000014097	setd1ba	66	71.703	Xiphophorus_maculatus