EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004157 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 28832 bases
Position: chr9:29806254-29835085
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023871	PARP	PF00644.20	2.4e-28	1	1
ENSORLP00015003387	PARP	PF00644.20	7.7e-28	1	1
ENSORLP00015023881	PARP	PF00644.20	4.8e-25	1	1
ENSORLP00015003392	PARP	PF00644.20	5.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009382	-	1570	-	ENSORLP00015003387	351 (aa)	-	-
ENSORLT00015009394	-	1358	-	ENSORLP00015023871	252 (aa)	-	-
ENSORLT00015009360	-	4593	-	ENSORLP00015003392	1530 (aa)	-	-
ENSORLT00015009373	-	1080	-	ENSORLP00015023881	359 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004157	-	77	35.681	ENSORLG00015013142	PARP11	62	35.681
ENSORLG00015004157	-	91	94.094	ENSORLG00015004253	-	88	94.094
ENSORLG00015004157	-	77	44.949	ENSORLG00015003387	-	73	39.286
ENSORLG00015004157	-	98	46.245	ENSORLG00015021971	si:ch211-219a4.3	98	42.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004157	-	91	65.854	ENSAPOG00000002274	-	97	52.083	Acanthochromis_polyacanthus
ENSORLG00015004157	-	89	62.264	ENSACIG00000014929	-	78	74.172	Amphilophus_citrinellus
ENSORLG00015004157	-	68	45.714	ENSACIG00000005931	-	75	69.565	Amphilophus_citrinellus
ENSORLG00015004157	-	63	61.585	ENSACIG00000001702	-	90	63.500	Amphilophus_citrinellus
ENSORLG00015004157	-	63	60.366	ENSACIG00000008604	-	85	59.777	Amphilophus_citrinellus
ENSORLG00015004157	-	100	63.636	ENSAOCG00000020608	-	85	64.646	Amphiprion_ocellaris
ENSORLG00015004157	-	100	64.567	ENSAPEG00000022069	-	75	69.091	Amphiprion_percula
ENSORLG00015004157	-	100	65.769	ENSATEG00000012173	-	85	64.986	Anabas_testudineus
ENSORLG00015004157	-	100	62.646	ENSACLG00000005627	-	92	62.360	Astatotilapia_calliptera
ENSORLG00015004157	-	100	68.872	ENSACLG00000005600	-	100	67.647	Astatotilapia_calliptera
ENSORLG00015004157	-	99	34.191	ENSAMXG00000010209	-	92	40.606	Astyanax_mexicanus
ENSORLG00015004157	-	99	55.686	ENSAMXG00000010091	-	84	53.103	Astyanax_mexicanus
ENSORLG00015004157	-	98	55.556	ENSAMXG00000031328	-	87	52.408	Astyanax_mexicanus
ENSORLG00015004157	-	99	61.961	ENSCSEG00000009834	-	99	62.805	Cynoglossus_semilaevis
ENSORLG00015004157	-	95	56.680	ENSCVAG00000000686	-	99	56.680	Cyprinodon_variegatus
ENSORLG00015004157	-	100	64.062	ENSCVAG00000009352	-	99	54.545	Cyprinodon_variegatus
ENSORLG00015004157	-	98	61.111	ENSDARG00000112454	FO744833.2	82	55.517	Danio_rerio
ENSORLG00015004157	-	76	37.000	ENSDARG00000098398	CABZ01079480.1	57	40.230	Danio_rerio
ENSORLG00015004157	-	99	32.836	ENSELUG00000004826	-	68	34.862	Esox_lucius
ENSORLG00015004157	-	99	61.719	ENSELUG00000013643	-	93	54.639	Esox_lucius
ENSORLG00015004157	-	100	51.984	ENSFHEG00000011780	-	97	55.957	Fundulus_heteroclitus
ENSORLG00015004157	-	98	33.459	ENSGMOG00000011217	-	70	42.500	Gadus_morhua
ENSORLG00015004157	-	100	64.844	ENSGAFG00000015867	-	100	63.971	Gambusia_affinis
ENSORLG00015004157	-	89	60.185	ENSHBUG00000013327	-	85	64.975	Haplochromis_burtoni
ENSORLG00015004157	-	100	63.035	ENSHBUG00000015143	-	96	62.921	Haplochromis_burtoni
ENSORLG00015004157	-	100	68.750	ENSHBUG00000015159	-	99	68.151	Haplochromis_burtoni
ENSORLG00015004157	-	74	52.000	ENSIPUG00000019762	-	63	52.000	Ictalurus_punctatus
ENSORLG00015004157	-	99	57.874	ENSIPUG00000019562	-	90	55.655	Ictalurus_punctatus
ENSORLG00015004157	-	99	31.818	ENSIPUG00000001876	-	83	38.636	Ictalurus_punctatus
ENSORLG00015004157	-	99	69.577	ENSKMAG00000010882	-	98	62.807	Kryptolebias_marmoratus
ENSORLG00015004157	-	99	67.323	ENSLBEG00000026419	-	99	54.950	Labrus_bergylta
ENSORLG00015004157	-	100	65.234	ENSMAMG00000018192	-	94	63.739	Mastacembelus_armatus
ENSORLG00015004157	-	99	64.567	ENSMAMG00000018261	-	93	63.736	Mastacembelus_armatus
ENSORLG00015004157	-	100	58.893	ENSMZEG00005002061	-	99	54.261	Maylandia_zebra
ENSORLG00015004157	-	100	67.843	ENSMZEG00005002038	-	84	67.232	Maylandia_zebra
ENSORLG00015004157	-	100	62.646	ENSMZEG00005027858	-	100	62.132	Maylandia_zebra
ENSORLG00015004157	-	100	67.717	ENSMZEG00005027852	-	76	73.118	Maylandia_zebra
ENSORLG00015004157	-	99	51.870	ENSMZEG00005027856	-	99	52.030	Maylandia_zebra
ENSORLG00015004157	-	90	72.549	ENSMMOG00000010419	-	95	72.549	Mola_mola
ENSORLG00015004157	-	99	66.929	ENSMALG00000004165	-	88	66.193	Monopterus_albus
ENSORLG00015004157	-	100	62.548	ENSNBRG00000002998	-	100	61.765	Neolamprologus_brichardi
ENSORLG00015004157	-	100	63.281	ENSNBRG00000003116	-	97	63.356	Neolamprologus_brichardi
ENSORLG00015004157	-	100	68.898	ENSONIG00000000241	-	77	71.429	Oreochromis_niloticus
ENSORLG00015004157	-	100	62.257	ENSONIG00000000234	-	82	63.793	Oreochromis_niloticus
ENSORLG00015004157	-	99	100.000	ENSORLG00000017404	-	95	100.000	Oryzias_latipes
ENSORLG00015004157	-	100	97.721	ENSORLG00000017386	-	96	97.674	Oryzias_latipes
ENSORLG00015004157	-	100	98.016	ENSORLG00020014046	-	100	98.016	Oryzias_latipes_hni
ENSORLG00015004157	-	100	69.531	ENSORLG00020014210	-	78	79.412	Oryzias_latipes_hni
ENSORLG00015004157	-	100	69.641	ENSOMEG00000009483	-	100	69.708	Oryzias_melastigma
ENSORLG00015004157	-	99	77.220	ENSOMEG00000009413	-	100	76.727	Oryzias_melastigma
ENSORLG00015004157	-	95	42.484	ENSPKIG00000004064	-	85	43.478	Paramormyrops_kingsleyae
ENSORLG00015004157	-	99	60.474	ENSPMGG00000011629	-	95	59.041	Periophthalmus_magnuspinnatus
ENSORLG00015004157	-	100	66.797	ENSPFOG00000015738	-	85	61.168	Poecilia_formosa
ENSORLG00015004157	-	89	61.702	ENSPLAG00000022742	-	86	67.839	Poecilia_latipinna
ENSORLG00015004157	-	100	67.188	ENSPMEG00000003192	-	100	66.168	Poecilia_mexicana
ENSORLG00015004157	-	100	67.188	ENSPREG00000017145	-	100	65.441	Poecilia_reticulata
ENSORLG00015004157	-	100	68.359	ENSPNYG00000008208	-	99	67.808	Pundamilia_nyererei
ENSORLG00015004157	-	100	68.504	ENSPNYG00000003575	-	100	66.566	Pundamilia_nyererei
ENSORLG00015004157	-	96	64.082	ENSPNYG00000023890	-	94	64.413	Pundamilia_nyererei
ENSORLG00015004157	-	100	57.634	ENSPNYG00000006865	-	100	49.682	Pundamilia_nyererei
ENSORLG00015004157	-	99	58.431	ENSPNAG00000004111	-	92	58.303	Pygocentrus_nattereri
ENSORLG00015004157	-	99	33.333	ENSPNAG00000005968	-	89	36.041	Pygocentrus_nattereri
ENSORLG00015004157	-	99	58.984	ENSPNAG00000026750	-	94	59.391	Pygocentrus_nattereri
ENSORLG00015004157	-	99	32.963	ENSPNAG00000006111	-	81	35.632	Pygocentrus_nattereri
ENSORLG00015004157	-	99	54.086	ENSPNAG00000005029	-	99	53.676	Pygocentrus_nattereri
ENSORLG00015004157	-	88	40.984	ENSSFOG00015019732	-	85	37.126	Scleropages_formosus
ENSORLG00015004157	-	99	55.118	ENSSFOG00015006999	-	83	51.724	Scleropages_formosus
ENSORLG00015004157	-	100	66.406	ENSSMAG00000016922	-	100	64.500	Scophthalmus_maximus
ENSORLG00015004157	-	100	67.188	ENSSDUG00000013560	-	73	65.979	Seriola_dumerili
ENSORLG00015004157	-	99	66.535	ENSSLDG00000011620	-	92	65.556	Seriola_lalandi_dorsalis
ENSORLG00015004157	-	98	65.600	ENSSPAG00000014708	-	90	66.316	Stegastes_partitus
ENSORLG00015004157	-	99	56.522	ENSTRUG00000003423	-	92	50.987	Takifugu_rubripes
ENSORLG00015004157	-	97	54.217	ENSTRUG00000010891	-	100	52.941	Takifugu_rubripes
ENSORLG00015004157	-	100	54.331	ENSTNIG00000018877	-	80	50.442	Tetraodon_nigroviridis
ENSORLG00015004157	-	100	66.406	ENSXCOG00000012535	-	100	65.074	Xiphophorus_couchianus
ENSORLG00015004157	-	100	66.797	ENSXMAG00000015158	-	91	66.332	Xiphophorus_maculatus