EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004215 (Gene tree)
Gene ID: -
Gene Symbol: thrap3a
Alias: -
Full Name: thyroid hormone receptor associated protein 3a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 15020 bases
Position: chr16:24064520-24079539
Accession: ZDB-GENE-030219-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015003464	THRAP3_BCLAF1	PF15440.6	3.4e-121	1	1
ENSORLP00015023935	THRAP3_BCLAF1	PF15440.6	5.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009239	-	3036	-	ENSORLP00015023935	907 (aa)	-	-
ENSORLT00015009219	-	3494	-	ENSORLP00015003464	872 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004215	thrap3a	69	36.489	ENSORLG00015007831	thrap3b	93	35.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004215	thrap3a	98	61.136	ENSAPOG00000024453	thrap3a	97	61.845	Acanthochromis_polyacanthus
ENSORLG00015004215	thrap3a	84	54.724	ENSACIG00000018110	thrap3a	94	54.617	Amphilophus_citrinellus
ENSORLG00015004215	thrap3a	53	37.474	ENSACIG00000015331	thrap3b	91	34.743	Amphilophus_citrinellus
ENSORLG00015004215	thrap3a	98	61.748	ENSAOCG00000014738	thrap3a	97	62.002	Amphiprion_ocellaris
ENSORLG00015004215	thrap3a	98	61.591	ENSAPEG00000005696	thrap3a	97	62.187	Amphiprion_percula
ENSORLG00015004215	thrap3a	64	44.915	ENSATEG00000006350	thrap3b	91	33.590	Anabas_testudineus
ENSORLG00015004215	thrap3a	97	55.859	ENSATEG00000009618	thrap3a	97	55.631	Anabas_testudineus
ENSORLG00015004215	thrap3a	98	55.869	ENSACLG00000027851	thrap3a	93	55.493	Astatotilapia_calliptera
ENSORLG00015004215	thrap3a	79	35.890	ENSACLG00000004763	thrap3b	94	35.529	Astatotilapia_calliptera
ENSORLG00015004215	thrap3a	96	35.487	ENSAMXG00000001863	thrap3a	92	35.016	Astyanax_mexicanus
ENSORLG00015004215	thrap3a	65	39.224	ENSAMXG00000020877	thrap3b	80	35.203	Astyanax_mexicanus
ENSORLG00015004215	thrap3a	96	41.163	ENSCSEG00000020325	thrap3a	90	41.299	Cynoglossus_semilaevis
ENSORLG00015004215	thrap3a	96	55.995	ENSCVAG00000017634	thrap3a	98	56.393	Cyprinodon_variegatus
ENSORLG00015004215	thrap3a	98	36.714	ENSDARG00000101989	thrap3a	97	37.879	Danio_rerio
ENSORLG00015004215	thrap3a	96	35.103	ENSELUG00000007499	thrap3b	92	36.453	Esox_lucius
ENSORLG00015004215	thrap3a	98	44.984	ENSELUG00000017733	thrap3a	97	45.640	Esox_lucius
ENSORLG00015004215	thrap3a	94	54.142	ENSFHEG00000000989	thrap3a	93	55.168	Fundulus_heteroclitus
ENSORLG00015004215	thrap3a	86	47.619	ENSGMOG00000006512	thrap3a	98	38.016	Gadus_morhua
ENSORLG00015004215	thrap3a	96	54.895	ENSGAFG00000008649	thrap3a	96	55.543	Gambusia_affinis
ENSORLG00015004215	thrap3a	50	39.468	ENSGAFG00000007090	thrap3b	73	40.179	Gambusia_affinis
ENSORLG00015004215	thrap3a	98	48.800	ENSGACG00000013745	thrap3a	92	49.199	Gasterosteus_aculeatus
ENSORLG00015004215	thrap3a	79	36.164	ENSHBUG00000001708	thrap3b	91	35.802	Haplochromis_burtoni
ENSORLG00015004215	thrap3a	98	55.982	ENSHBUG00000009602	thrap3a	97	55.717	Haplochromis_burtoni
ENSORLG00015004215	thrap3a	70	35.045	ENSHCOG00000004098	thrap3b	71	35.565	Hippocampus_comes
ENSORLG00015004215	thrap3a	69	39.837	ENSIPUG00000005707	thrap3b	93	33.633	Ictalurus_punctatus
ENSORLG00015004215	thrap3a	72	35.532	ENSIPUG00000015339	thrap3a	96	34.509	Ictalurus_punctatus
ENSORLG00015004215	thrap3a	96	56.794	ENSKMAG00000005707	thrap3a	98	61.576	Kryptolebias_marmoratus
ENSORLG00015004215	thrap3a	98	56.222	ENSLBEG00000008813	thrap3a	97	56.527	Labrus_bergylta
ENSORLG00015004215	thrap3a	77	36.107	ENSLBEG00000017803	thrap3b	91	35.172	Labrus_bergylta
ENSORLG00015004215	thrap3a	98	55.480	ENSMAMG00000007707	thrap3a	96	53.681	Mastacembelus_armatus
ENSORLG00015004215	thrap3a	97	34.821	ENSMZEG00005026309	thrap3b	94	34.881	Maylandia_zebra
ENSORLG00015004215	thrap3a	98	55.869	ENSMZEG00005007212	thrap3a	97	55.605	Maylandia_zebra
ENSORLG00015004215	thrap3a	97	50.111	ENSMMOG00000018587	thrap3a	98	50.055	Mola_mola
ENSORLG00015004215	thrap3a	98	50.285	ENSMALG00000011980	thrap3a	93	50.342	Monopterus_albus
ENSORLG00015004215	thrap3a	71	35.420	ENSMALG00000012582	thrap3b	94	33.908	Monopterus_albus
ENSORLG00015004215	thrap3a	86	58.065	ENSNBRG00000014237	thrap3b	95	34.705	Neolamprologus_brichardi
ENSORLG00015004215	thrap3a	98	56.566	ENSNBRG00000009991	thrap3a	97	56.054	Neolamprologus_brichardi
ENSORLG00015004215	thrap3a	98	55.431	ENSONIG00000016278	thrap3a	92	57.069	Oreochromis_niloticus
ENSORLG00015004215	thrap3a	68	37.134	ENSONIG00000013673	thrap3b	96	33.888	Oreochromis_niloticus
ENSORLG00015004215	thrap3a	69	37.403	ENSORLG00000009543	thrap3b	93	35.906	Oryzias_latipes
ENSORLG00015004215	thrap3a	100	98.456	ENSORLG00000014550	thrap3a	100	98.456	Oryzias_latipes
ENSORLG00015004215	thrap3a	100	98.678	ENSORLG00020019116	thrap3a	100	98.678	Oryzias_latipes_hni
ENSORLG00015004215	thrap3a	69	36.600	ENSORLG00020016319	thrap3b	93	35.347	Oryzias_latipes_hni
ENSORLG00015004215	thrap3a	99	82.413	ENSOMEG00000019164	thrap3a	99	83.671	Oryzias_melastigma
ENSORLG00015004215	thrap3a	67	37.539	ENSOMEG00000005716	thrap3b	93	34.884	Oryzias_melastigma
ENSORLG00015004215	thrap3a	82	42.010	ENSPKIG00000005150	thrap3a	97	43.716	Paramormyrops_kingsleyae
ENSORLG00015004215	thrap3a	95	55.477	ENSPFOG00000013297	thrap3a	92	56.132	Poecilia_formosa
ENSORLG00015004215	thrap3a	71	36.310	ENSPFOG00000000525	thrap3b	69	37.134	Poecilia_formosa
ENSORLG00015004215	thrap3a	71	36.310	ENSPLAG00000016521	thrap3b	69	37.134	Poecilia_latipinna
ENSORLG00015004215	thrap3a	95	55.477	ENSPLAG00000000635	thrap3a	92	56.132	Poecilia_latipinna
ENSORLG00015004215	thrap3a	95	55.477	ENSPMEG00000019022	thrap3a	92	55.962	Poecilia_mexicana
ENSORLG00015004215	thrap3a	71	36.747	ENSPMEG00000009021	thrap3b	69	37.288	Poecilia_mexicana
ENSORLG00015004215	thrap3a	96	54.748	ENSPREG00000005816	thrap3a	93	55.399	Poecilia_reticulata
ENSORLG00015004215	thrap3a	72	36.041	ENSPREG00000009927	thrap3b	71	35.945	Poecilia_reticulata
ENSORLG00015004215	thrap3a	98	56.095	ENSPNYG00000013314	thrap3a	93	55.493	Pundamilia_nyererei
ENSORLG00015004215	thrap3a	63	41.346	ENSPNAG00000028762	thrap3b	61	41.346	Pygocentrus_nattereri
ENSORLG00015004215	thrap3a	73	35.364	ENSPNAG00000015136	thrap3a	98	36.154	Pygocentrus_nattereri
ENSORLG00015004215	thrap3a	82	40.979	ENSSFOG00015020057	thrap3	93	42.966	Scleropages_formosus
ENSORLG00015004215	thrap3a	97	55.506	ENSSMAG00000003703	thrap3a	93	56.517	Scophthalmus_maximus
ENSORLG00015004215	thrap3a	52	37.474	ENSSDUG00000007054	thrap3b	91	36.292	Seriola_dumerili
ENSORLG00015004215	thrap3a	97	59.389	ENSSDUG00000010132	thrap3a	99	59.071	Seriola_dumerili
ENSORLG00015004215	thrap3a	97	59.570	ENSSLDG00000003306	thrap3a	94	59.163	Seriola_lalandi_dorsalis
ENSORLG00015004215	thrap3a	51	37.554	ENSSLDG00000009210	thrap3b	95	37.085	Seriola_lalandi_dorsalis
ENSORLG00015004215	thrap3a	97	59.545	ENSSPAG00000017651	thrap3a	97	61.276	Stegastes_partitus
ENSORLG00015004215	thrap3a	99	47.566	ENSTRUG00000010702	thrap3a	96	47.766	Takifugu_rubripes
ENSORLG00015004215	thrap3a	96	31.511	ENSTNIG00000004582	thrap3b	93	31.629	Tetraodon_nigroviridis
ENSORLG00015004215	thrap3a	94	45.952	ENSTNIG00000012194	thrap3a	94	46.796	Tetraodon_nigroviridis
ENSORLG00015004215	thrap3a	94	50.657	ENSXCOG00000001569	thrap3a	92	51.257	Xiphophorus_couchianus
ENSORLG00015004215	thrap3a	72	35.565	ENSXMAG00000017962	thrap3b	71	36.930	Xiphophorus_maculatus
ENSORLG00015004215	thrap3a	96	55.180	ENSXMAG00000014797	thrap3a	93	55.659	Xiphophorus_maculatus