EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 34635 bases
Position: chr9:29752980-29787614
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015023916	PARP	PF00644.20	5.4e-28	1	1
ENSORLP00015003479	PARP	PF00644.20	2.2e-26	1	1
ENSORLP00015003442	PARP	PF00644.20	3.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009266	-	5037	-	ENSORLP00015003442	1678 (aa)	-	-
ENSORLT00015009206	-	5606	-	ENSORLP00015003479	1668 (aa)	-	-
ENSORLT00015009283	-	927	-	ENSORLP00015023916	308 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004253	-	63	41.919	ENSORLG00015003387	-	58	41.919
ENSORLG00015004253	-	88	94.094	ENSORLG00015004157	-	91	94.094
ENSORLG00015004253	-	63	38.889	ENSORLG00015002400	si:ch73-252i11.1	50	32.740
ENSORLG00015004253	-	63	32.710	ENSORLG00015013142	PARP11	62	32.710
ENSORLG00015004253	-	95	45.118	ENSORLG00015021971	si:ch211-219a4.3	90	53.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004253	-	95	57.840	ENSAPOG00000002274	-	99	57.840	Acanthochromis_polyacanthus
ENSORLG00015004253	-	60	53.514	ENSACIG00000008604	-	85	55.307	Amphilophus_citrinellus
ENSORLG00015004253	-	67	57.561	ENSACIG00000001702	-	89	59.000	Amphilophus_citrinellus
ENSORLG00015004253	-	52	71.069	ENSACIG00000014929	-	80	72.368	Amphilophus_citrinellus
ENSORLG00015004253	-	99	59.539	ENSAOCG00000020608	-	100	58.223	Amphiprion_ocellaris
ENSORLG00015004253	-	96	58.725	ENSAPEG00000022069	-	100	60.345	Amphiprion_percula
ENSORLG00015004253	-	96	62.416	ENSATEG00000012173	-	99	61.058	Anabas_testudineus
ENSORLG00015004253	-	96	65.436	ENSACLG00000005600	-	100	64.809	Astatotilapia_calliptera
ENSORLG00015004253	-	96	61.824	ENSACLG00000005627	-	96	61.351	Astatotilapia_calliptera
ENSORLG00015004253	-	96	52.013	ENSAMXG00000010091	-	99	47.832	Astyanax_mexicanus
ENSORLG00015004253	-	95	31.333	ENSAMXG00000010209	-	91	31.518	Astyanax_mexicanus
ENSORLG00015004253	-	96	50.000	ENSAMXG00000031328	-	99	48.039	Astyanax_mexicanus
ENSORLG00015004253	-	96	58.923	ENSCSEG00000009834	-	99	60.182	Cynoglossus_semilaevis
ENSORLG00015004253	-	97	61.333	ENSCVAG00000009352	-	99	57.181	Cyprinodon_variegatus
ENSORLG00015004253	-	81	57.708	ENSCVAG00000000686	-	99	59.109	Cyprinodon_variegatus
ENSORLG00015004253	-	96	52.365	ENSDARG00000112454	FO744833.2	96	44.254	Danio_rerio
ENSORLG00015004253	-	96	56.229	ENSELUG00000013643	-	99	51.455	Esox_lucius
ENSORLG00015004253	-	95	36.567	ENSELUG00000004826	-	81	36.567	Esox_lucius
ENSORLG00015004253	-	78	74.126	ENSFHEG00000011780	-	100	74.126	Fundulus_heteroclitus
ENSORLG00015004253	-	84	33.456	ENSGMOG00000011217	-	52	33.456	Gadus_morhua
ENSORLG00015004253	-	90	63.309	ENSGAFG00000015867	-	100	64.706	Gambusia_affinis
ENSORLG00015004253	-	96	61.149	ENSHBUG00000015143	-	99	61.081	Haplochromis_burtoni
ENSORLG00015004253	-	96	64.646	ENSHBUG00000015159	-	99	65.411	Haplochromis_burtoni
ENSORLG00015004253	-	63	67.010	ENSHBUG00000013327	-	79	74.510	Haplochromis_burtoni
ENSORLG00015004253	-	84	32.210	ENSIPUG00000001876	-	54	32.210	Ictalurus_punctatus
ENSORLG00015004253	-	82	46.742	ENSIPUG00000019762	-	87	46.023	Ictalurus_punctatus
ENSORLG00015004253	-	96	52.027	ENSIPUG00000019562	-	91	62.500	Ictalurus_punctatus
ENSORLG00015004253	-	100	62.709	ENSKMAG00000010882	-	90	67.480	Kryptolebias_marmoratus
ENSORLG00015004253	-	96	62.500	ENSLBEG00000026419	-	99	55.806	Labrus_bergylta
ENSORLG00015004253	-	96	63.423	ENSMAMG00000018192	-	98	62.703	Mastacembelus_armatus
ENSORLG00015004253	-	91	63.214	ENSMAMG00000018261	-	93	64.599	Mastacembelus_armatus
ENSORLG00015004253	-	96	64.310	ENSMZEG00005027852	-	100	65.139	Maylandia_zebra
ENSORLG00015004253	-	81	77.551	ENSMZEG00005027856	-	84	77.551	Maylandia_zebra
ENSORLG00015004253	-	90	61.011	ENSMZEG00005027858	-	100	61.397	Maylandia_zebra
ENSORLG00015004253	-	98	62.376	ENSMZEG00005002038	-	92	62.916	Maylandia_zebra
ENSORLG00015004253	-	95	60.516	ENSMZEG00005002061	-	99	54.304	Maylandia_zebra
ENSORLG00015004253	-	88	71.053	ENSMMOG00000010419	-	97	71.053	Mola_mola
ENSORLG00015004253	-	96	62.290	ENSMALG00000004165	-	97	62.791	Monopterus_albus
ENSORLG00015004253	-	94	61.246	ENSNBRG00000002998	-	100	62.132	Neolamprologus_brichardi
ENSORLG00015004253	-	96	60.811	ENSNBRG00000003116	-	96	61.301	Neolamprologus_brichardi
ENSORLG00015004253	-	96	61.824	ENSONIG00000000234	-	99	54.045	Oreochromis_niloticus
ENSORLG00015004253	-	96	64.310	ENSONIG00000000241	-	100	65.347	Oreochromis_niloticus
ENSORLG00015004253	-	100	94.964	ENSORLG00000017404	-	97	91.949	Oryzias_latipes
ENSORLG00015004253	-	94	95.580	ENSORLG00000017386	-	95	90.326	Oryzias_latipes
ENSORLG00015004253	-	96	68.350	ENSORLG00020014046	-	100	68.750	Oryzias_latipes_hni
ENSORLG00015004253	-	96	92.256	ENSORLG00020014210	-	100	94.783	Oryzias_latipes_hni
ENSORLG00015004253	-	90	79.783	ENSOMEG00000009413	-	100	79.783	Oryzias_melastigma
ENSORLG00015004253	-	94	73.885	ENSOMEG00000009483	-	97	73.885	Oryzias_melastigma
ENSORLG00015004253	-	99	31.395	ENSPKIG00000004064	-	86	46.610	Paramormyrops_kingsleyae
ENSORLG00015004253	-	90	52.878	ENSPMGG00000011629	-	95	54.044	Periophthalmus_magnuspinnatus
ENSORLG00015004253	-	96	63.851	ENSPFOG00000015738	-	95	57.508	Poecilia_formosa
ENSORLG00015004253	-	66	68.812	ENSPLAG00000022742	-	86	69.697	Poecilia_latipinna
ENSORLG00015004253	-	96	63.973	ENSPMEG00000003192	-	100	65.269	Poecilia_mexicana
ENSORLG00015004253	-	93	74.172	ENSPREG00000017145	-	99	74.172	Poecilia_reticulata
ENSORLG00015004253	-	96	64.983	ENSPNYG00000003575	-	100	65.269	Pundamilia_nyererei
ENSORLG00015004253	-	96	64.646	ENSPNYG00000008208	-	99	65.411	Pundamilia_nyererei
ENSORLG00015004253	-	93	61.538	ENSPNYG00000023890	-	93	62.633	Pundamilia_nyererei
ENSORLG00015004253	-	97	56.333	ENSPNYG00000006865	-	96	56.757	Pundamilia_nyererei
ENSORLG00015004253	-	95	30.693	ENSPNAG00000006111	-	61	30.693	Pygocentrus_nattereri
ENSORLG00015004253	-	90	53.957	ENSPNAG00000004111	-	92	54.945	Pygocentrus_nattereri
ENSORLG00015004253	-	90	46.503	ENSPNAG00000005029	-	99	47.143	Pygocentrus_nattereri
ENSORLG00015004253	-	62	37.056	ENSPNAG00000005968	-	86	36.464	Pygocentrus_nattereri
ENSORLG00015004253	-	90	54.839	ENSPNAG00000026750	-	94	58.209	Pygocentrus_nattereri
ENSORLG00015004253	-	100	44.517	ENSSFOG00015006999	-	98	41.224	Scleropages_formosus
ENSORLG00015004253	-	96	34.091	ENSSFOG00015019732	-	78	43.011	Scleropages_formosus
ENSORLG00015004253	-	96	60.943	ENSSMAG00000016922	-	98	71.429	Scophthalmus_maximus
ENSORLG00015004253	-	96	61.149	ENSSDUG00000013560	-	95	63.833	Seriola_dumerili
ENSORLG00015004253	-	90	59.928	ENSSLDG00000011620	-	92	61.255	Seriola_lalandi_dorsalis
ENSORLG00015004253	-	97	62.000	ENSSPAG00000014708	-	90	66.154	Stegastes_partitus
ENSORLG00015004253	-	100	48.780	ENSTRUG00000003423	-	94	47.014	Takifugu_rubripes
ENSORLG00015004253	-	90	49.286	ENSTRUG00000010891	-	100	50.365	Takifugu_rubripes
ENSORLG00015004253	-	96	49.495	ENSTNIG00000018877	-	100	51.690	Tetraodon_nigroviridis
ENSORLG00015004253	-	94	74.834	ENSXCOG00000012535	-	99	74.834	Xiphophorus_couchianus
ENSORLG00015004253	-	96	65.203	ENSXMAG00000015158	-	100	65.936	Xiphophorus_maculatus