EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004280 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 25400 bases
Position: chr17:31472448-31497847
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015003524	RRM_1	PF00076.22	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015009125	-	2657	-	ENSORLP00015003524	288 (aa)	-	-
ENSORLT00015009162	-	543	-	ENSORLP00015023969	180 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004280	-	100	70.608	ENSORLG00015004727	-	100	72.635
ENSORLG00015004280	-	75	53.571	ENSORLG00015019755	-	68	53.540
ENSORLG00015004280	-	75	51.739	ENSORLG00015009460	-	66	55.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004280	-	100	86.986	ENSAPOG00000008744	-	100	86.986	Acanthochromis_polyacanthus
ENSORLG00015004280	-	97	78.694	ENSACIG00000007143	-	97	79.038	Amphilophus_citrinellus
ENSORLG00015004280	-	100	88.699	ENSAOCG00000023599	-	100	89.041	Amphiprion_ocellaris
ENSORLG00015004280	-	100	71.622	ENSAOCG00000001605	-	100	73.311	Amphiprion_ocellaris
ENSORLG00015004280	-	97	83.051	ENSATEG00000022219	-	88	83.871	Anabas_testudineus
ENSORLG00015004280	-	84	71.837	ENSATEG00000023356	-	96	71.315	Anabas_testudineus
ENSORLG00015004280	-	100	71.284	ENSACLG00000006949	-	100	71.622	Astatotilapia_calliptera
ENSORLG00015004280	-	100	88.014	ENSACLG00000011720	-	100	88.014	Astatotilapia_calliptera
ENSORLG00015004280	-	100	70.608	ENSAMXG00000019031	-	100	70.946	Astyanax_mexicanus
ENSORLG00015004280	-	100	63.087	ENSAMXG00000032617	-	90	66.045	Astyanax_mexicanus
ENSORLG00015004280	-	100	77.055	ENSCSEG00000014237	-	100	77.397	Cynoglossus_semilaevis
ENSORLG00015004280	-	100	87.329	ENSCVAG00000013624	-	100	87.671	Cyprinodon_variegatus
ENSORLG00015004280	-	100	71.284	ENSCVAG00000018104	-	100	72.297	Cyprinodon_variegatus
ENSORLG00015004280	-	63	71.585	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSORLG00015004280	-	97	61.972	ENSELUG00000001702	-	92	61.624	Esox_lucius
ENSORLG00015004280	-	57	72.727	ENSGMOG00000005914	-	100	72.727	Gadus_morhua
ENSORLG00015004280	-	61	78.652	ENSGACG00000004991	-	91	82.530	Gasterosteus_aculeatus
ENSORLG00015004280	-	100	88.014	ENSHBUG00000010040	-	100	88.356	Haplochromis_burtoni
ENSORLG00015004280	-	100	71.284	ENSHBUG00000015412	-	100	71.622	Haplochromis_burtoni
ENSORLG00015004280	-	100	70.946	ENSIPUG00000000507	ralyl	100	71.284	Ictalurus_punctatus
ENSORLG00015004280	-	100	70.608	ENSKMAG00000018155	-	100	72.635	Kryptolebias_marmoratus
ENSORLG00015004280	-	100	84.589	ENSKMAG00000022093	-	100	85.616	Kryptolebias_marmoratus
ENSORLG00015004280	-	100	84.247	ENSLBEG00000012873	-	100	84.589	Labrus_bergylta
ENSORLG00015004280	-	100	71.284	ENSLBEG00000011011	-	100	71.959	Labrus_bergylta
ENSORLG00015004280	-	100	69.932	ENSLOCG00000012787	ralyl	99	68.581	Lepisosteus_oculatus
ENSORLG00015004280	-	99	83.448	ENSMAMG00000001723	-	97	83.793	Mastacembelus_armatus
ENSORLG00015004280	-	97	69.863	ENSMZEG00005018748	-	93	70.652	Maylandia_zebra
ENSORLG00015004280	-	100	88.014	ENSMZEG00005024447	-	100	88.014	Maylandia_zebra
ENSORLG00015004280	-	97	78.378	ENSMMOG00000020441	-	81	81.429	Mola_mola
ENSORLG00015004280	-	100	87.671	ENSMALG00000019019	-	78	88.014	Monopterus_albus
ENSORLG00015004280	-	100	69.595	ENSMALG00000012952	-	100	70.270	Monopterus_albus
ENSORLG00015004280	-	97	75.000	ENSNBRG00000011206	-	91	78.909	Neolamprologus_brichardi
ENSORLG00015004280	-	97	69.521	ENSNBRG00000011376	-	93	72.101	Neolamprologus_brichardi
ENSORLG00015004280	-	100	99.306	ENSORLG00000017934	-	100	99.306	Oryzias_latipes
ENSORLG00015004280	-	100	70.608	ENSORLG00000012719	-	100	72.635	Oryzias_latipes
ENSORLG00015004280	-	100	70.608	ENSORLG00020004438	-	100	72.635	Oryzias_latipes_hni
ENSORLG00015004280	-	100	98.264	ENSORLG00020000082	-	100	98.264	Oryzias_latipes_hni
ENSORLG00015004280	-	100	70.608	ENSOMEG00000001170	-	100	72.635	Oryzias_melastigma
ENSORLG00015004280	-	100	90.690	ENSOMEG00000011821	-	100	90.690	Oryzias_melastigma
ENSORLG00015004280	-	100	69.966	ENSPKIG00000015926	-	100	70.307	Paramormyrops_kingsleyae
ENSORLG00015004280	-	79	68.240	ENSPMGG00000014481	-	95	69.528	Periophthalmus_magnuspinnatus
ENSORLG00015004280	-	97	71.478	ENSPMGG00000009532	-	91	72.628	Periophthalmus_magnuspinnatus
ENSORLG00015004280	-	97	82.993	ENSPFOG00000006120	-	93	83.813	Poecilia_formosa
ENSORLG00015004280	-	97	80.496	ENSPLAG00000009877	-	71	80.827	Poecilia_latipinna
ENSORLG00015004280	-	97	71.034	ENSPLAG00000011323	ralyl	94	73.358	Poecilia_latipinna
ENSORLG00015004280	-	97	80.496	ENSPMEG00000013624	-	75	80.827	Poecilia_mexicana
ENSORLG00015004280	-	97	71.034	ENSPMEG00000023847	ralyl	94	73.358	Poecilia_mexicana
ENSORLG00015004280	-	97	70.690	ENSPREG00000001956	ralyl	94	72.628	Poecilia_reticulata
ENSORLG00015004280	-	97	86.572	ENSPREG00000013805	-	100	80.769	Poecilia_reticulata
ENSORLG00015004280	-	97	75.000	ENSPNYG00000008772	-	91	78.909	Pundamilia_nyererei
ENSORLG00015004280	-	97	69.863	ENSPNYG00000003548	-	93	70.652	Pundamilia_nyererei
ENSORLG00015004280	-	100	69.932	ENSPNAG00000000498	-	88	70.270	Pygocentrus_nattereri
ENSORLG00015004280	-	100	65.753	ENSPNAG00000026098	-	100	65.411	Pygocentrus_nattereri
ENSORLG00015004280	-	100	72.635	ENSSFOG00015009401	-	100	72.973	Scleropages_formosus
ENSORLG00015004280	-	100	59.727	ENSSFOG00015004575	-	100	60.068	Scleropages_formosus
ENSORLG00015004280	-	100	70.946	ENSSMAG00000005608	-	100	71.284	Scophthalmus_maximus
ENSORLG00015004280	-	97	82.807	ENSSMAG00000015907	-	87	83.643	Scophthalmus_maximus
ENSORLG00015004280	-	100	70.946	ENSSDUG00000007587	-	100	71.622	Seriola_dumerili
ENSORLG00015004280	-	100	89.041	ENSSDUG00000012473	-	100	89.384	Seriola_dumerili
ENSORLG00015004280	-	100	88.699	ENSSLDG00000011534	-	100	89.041	Seriola_lalandi_dorsalis
ENSORLG00015004280	-	100	70.270	ENSSLDG00000020603	-	100	71.622	Seriola_lalandi_dorsalis
ENSORLG00015004280	-	97	75.801	ENSSPAG00000013858	-	87	76.226	Stegastes_partitus
ENSORLG00015004280	-	85	82.000	ENSTRUG00000003829	-	90	80.524	Takifugu_rubripes
ENSORLG00015004280	-	97	77.891	ENSTNIG00000005594	-	99	77.891	Tetraodon_nigroviridis
ENSORLG00015004280	-	100	63.087	ENSXETG00000017729	ralyl	99	63.087	Xenopus_tropicalis
ENSORLG00015004280	-	97	68.792	ENSXCOG00000015156	-	88	71.277	Xiphophorus_couchianus
ENSORLG00015004280	-	100	71.622	ENSXMAG00000008396	-	100	73.311	Xiphophorus_maculatus
ENSORLG00015004280	-	100	86.644	ENSXMAG00000007614	-	100	86.986	Xiphophorus_maculatus