EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015004425 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 13163 bases
Position: chr21:32295792-32308954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015003672	Nop52	PF05997.12	8e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015008891	-	3958	-	ENSORLP00015003672	878 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004425	-	56	48.000	ENSG00000160208	RRP1B	65	46.257	Homo_sapiens
ENSORLG00015004425	-	56	45.600	ENSAMEG00000011401	RRP1B	68	44.800	Ailuropoda_melanoleuca
ENSORLG00015004425	-	51	67.979	ENSAOCG00000017894	-	100	67.979	Amphiprion_ocellaris
ENSORLG00015004425	-	51	49.849	ENSAPLG00000004310	RRP1B	65	49.231	Anas_platyrhynchos
ENSORLG00015004425	-	60	48.980	ENSACAG00000017851	RRP1B	66	48.744	Anolis_carolinensis
ENSORLG00015004425	-	59	47.480	ENSANAG00000034889	RRP1B	68	46.791	Aotus_nancymaae
ENSORLG00015004425	-	56	47.619	ENSBTAG00000017418	RRP1B	68	43.972	Bos_taurus
ENSORLG00015004425	-	62	46.154	ENSCJAG00000017077	RRP1B	68	45.455	Callithrix_jacchus
ENSORLG00015004425	-	51	45.600	ENSCAFG00000010621	RRP1B	63	45.600	Canis_familiaris
ENSORLG00015004425	-	56	45.867	ENSCAFG00020018901	RRP1B	67	45.600	Canis_lupus_dingo
ENSORLG00015004425	-	56	46.825	ENSCHIG00000021519	RRP1B	68	44.772	Capra_hircus
ENSORLG00015004425	-	54	48.000	ENSCPOG00000002396	RRP1B	74	43.548	Cavia_porcellus
ENSORLG00015004425	-	59	47.215	ENSCCAG00000029384	RRP1B	68	46.524	Cebus_capucinus
ENSORLG00015004425	-	56	48.000	ENSCATG00000017423	RRP1B	65	45.989	Cercocebus_atys
ENSORLG00015004425	-	54	46.087	ENSCLAG00000005622	RRP1B	70	41.728	Chinchilla_lanigera
ENSORLG00015004425	-	56	47.200	ENSCSAG00000007961	RRP1B	65	46.257	Chlorocebus_sabaeus
ENSORLG00015004425	-	62	52.925	ENSCPBG00000010310	RRP1B	65	51.682	Chrysemys_picta_bellii
ENSORLG00015004425	-	56	48.000	ENSCANG00000040952	RRP1B	65	46.524	Colobus_angolensis_palliatus
ENSORLG00015004425	-	54	47.656	ENSCGRG00001010889	-	64	45.652	Cricetulus_griseus_chok1gshd
ENSORLG00015004425	-	54	47.656	ENSCGRG00001023882	-	58	68.182	Cricetulus_griseus_chok1gshd
ENSORLG00015004425	-	51	47.656	ENSCGRG00000001553	Rrp1b	61	45.528	Cricetulus_griseus_crigri
ENSORLG00015004425	-	54	60.367	ENSCSEG00000020711	-	86	62.069	Cynoglossus_semilaevis
ENSORLG00015004425	-	61	54.986	ENSDARG00000103337	rrp1	90	54.032	Danio_rerio
ENSORLG00015004425	-	53	42.675	ENSDNOG00000019880	RRP1	75	49.854	Dasypus_novemcinctus
ENSORLG00015004425	-	59	45.699	ENSDNOG00000032774	RRP1B	68	44.595	Dasypus_novemcinctus
ENSORLG00015004425	-	55	55.172	ENSETEG00000019489	RRP1B	62	54.118	Echinops_telfairi
ENSORLG00015004425	-	56	46.400	ENSEASG00005001687	RRP1B	65	46.400	Equus_asinus_asinus
ENSORLG00015004425	-	56	46.400	ENSECAG00000018018	RRP1B	65	46.400	Equus_caballus
ENSORLG00015004425	-	56	46.212	ENSFCAG00000010272	RRP1B	66	44.652	Felis_catus
ENSORLG00015004425	-	62	46.897	ENSFALG00000002024	RRP1B	64	47.419	Ficedula_albicollis
ENSORLG00015004425	-	55	44.056	ENSFDAG00000010899	RRP1B	65	42.566	Fukomys_damarensis
ENSORLG00015004425	-	62	59.836	ENSGMOG00000001953	-	73	58.886	Gadus_morhua
ENSORLG00015004425	-	58	50.136	ENSGALG00000035696	RRP1B	61	51.429	Gallus_gallus
ENSORLG00015004425	-	62	63.315	ENSGACG00000001438	rrp1	76	65.301	Gasterosteus_aculeatus
ENSORLG00015004425	-	62	53.022	ENSGAGG00000000375	RRP1B	67	51.081	Gopherus_agassizii
ENSORLG00015004425	-	56	48.000	ENSGGOG00000012069	RRP1B	65	46.257	Gorilla_gorilla
ENSORLG00015004425	-	55	44.961	ENSHGLG00000004968	RRP1B	65	45.968	Heterocephalus_glaber_female
ENSORLG00015004425	-	51	61.386	ENSIPUG00000000673	-	76	49.876	Ictalurus_punctatus
ENSORLG00015004425	-	56	47.143	ENSSTOG00000011790	RRP1B	67	46.113	Ictidomys_tridecemlineatus
ENSORLG00015004425	-	51	47.656	ENSJJAG00000021279	Rrp1b	61	43.902	Jaculus_jaculus
ENSORLG00015004425	-	65	61.337	ENSKMAG00000005539	rrp1	100	60.766	Kryptolebias_marmoratus
ENSORLG00015004425	-	55	52.316	ENSLACG00000017332	-	62	51.226	Latimeria_chalumnae
ENSORLG00015004425	-	71	58.747	ENSLOCG00000004064	-	89	57.922	Lepisosteus_oculatus
ENSORLG00015004425	-	56	48.000	ENSMFAG00000039152	RRP1B	65	46.524	Macaca_fascicularis
ENSORLG00015004425	-	52	54.023	ENSMMUG00000000104	RRP1B	60	54.321	Macaca_mulatta
ENSORLG00015004425	-	56	48.800	ENSMNEG00000034269	RRP1B	65	46.257	Macaca_nemestrina
ENSORLG00015004425	-	51	48.000	ENSMLEG00000040044	RRP1B	62	45.619	Mandrillus_leucophaeus
ENSORLG00015004425	-	66	60.859	ENSMAMG00000007131	-	57	62.374	Mastacembelus_armatus
ENSORLG00015004425	-	54	50.476	ENSMGAG00000014591	RRP1B	61	50.476	Meleagris_gallopavo
ENSORLG00015004425	-	51	46.875	ENSMAUG00000021508	Rrp1b	61	46.605	Mesocricetus_auratus
ENSORLG00015004425	-	58	46.438	ENSMICG00000004686	RRP1B	69	45.455	Microcebus_murinus
ENSORLG00015004425	-	53	45.238	ENSMOCG00000001117	Rrp1b	63	45.528	Microtus_ochrogaster
ENSORLG00015004425	-	62	50.964	ENSMODG00000021033	RRP1B	69	47.558	Monodelphis_domestica
ENSORLG00015004425	-	55	46.264	MGP_CAROLIEiJ_G0021376	Rrp1b	56	65.152	Mus_caroli
ENSORLG00015004425	-	53	47.590	ENSMUSG00000058392	Rrp1b	56	66.667	Mus_musculus
ENSORLG00015004425	-	68	45.892	MGP_PahariEiJ_G0023695	Rrp1b	56	65.152	Mus_pahari
ENSORLG00015004425	-	55	46.839	MGP_SPRETEiJ_G0022290	Rrp1b	56	66.667	Mus_spretus
ENSORLG00015004425	-	56	46.341	ENSMLUG00000007738	RRP1B	65	46.341	Myotis_lucifugus
ENSORLG00015004425	-	55	43.228	ENSNGAG00000021073	Rrp1b	65	43.768	Nannospalax_galili
ENSORLG00015004425	-	56	48.000	ENSNLEG00000001490	RRP1B	71	45.989	Nomascus_leucogenys
ENSORLG00015004425	-	53	44.118	ENSODEG00000013177	RRP1B	65	44.118	Octodon_degus
ENSORLG00015004425	-	53	63.944	ENSONIG00000004264	rrp1	65	62.849	Oreochromis_niloticus
ENSORLG00015004425	-	56	44.615	ENSOANG00000006470	RRP1B	65	44.000	Ornithorhynchus_anatinus
ENSORLG00015004425	-	50	42.475	ENSOCUG00000025931	RRP1B	64	42.373	Oryctolagus_cuniculus
ENSORLG00015004425	-	100	95.330	ENSORLG00020007199	-	100	95.216	Oryzias_latipes_hni
ENSORLG00015004425	-	100	70.045	ENSOMEG00000016910	-	100	69.799	Oryzias_melastigma
ENSORLG00015004425	-	56	46.341	ENSOGAG00000009872	RRP1B	76	44.737	Otolemur_garnettii
ENSORLG00015004425	-	58	45.946	ENSPPAG00000035319	RRP1B	65	45.455	Pan_paniscus
ENSORLG00015004425	-	56	45.187	ENSPPRG00000010356	RRP1B	67	44.920	Panthera_pardus
ENSORLG00015004425	-	55	43.505	ENSPTIG00000016894	RRP1B	78	43.202	Panthera_tigris_altaica
ENSORLG00015004425	-	56	48.800	ENSPTRG00000013958	RRP1B	68	46.257	Pan_troglodytes
ENSORLG00015004425	-	56	48.000	ENSPANG00000011090	RRP1B	65	46.257	Papio_anubis
ENSORLG00015004425	-	55	52.989	ENSPSIG00000008152	RRP1B	60	52.022	Pelodiscus_sinensis
ENSORLG00015004425	-	59	46.552	ENSPEMG00000022490	Rrp1b	66	45.652	Peromyscus_maniculatus_bairdii
ENSORLG00015004425	-	63	50.398	ENSPCIG00000015513	RRP1B	65	55.294	Phascolarctos_cinereus
ENSORLG00015004425	-	61	68.280	ENSPFOG00000007424	-	69	67.655	Poecilia_formosa
ENSORLG00015004425	-	56	48.000	ENSPPYG00000011470	RRP1B	65	47.200	Pongo_abelii
ENSORLG00015004425	-	58	46.980	ENSPCOG00000017927	RRP1B	70	46.980	Propithecus_coquereli
ENSORLG00015004425	-	61	41.067	ENSPVAG00000001436	RRP1B	67	42.759	Pteropus_vampyrus
ENSORLG00015004425	-	64	50.569	ENSPNAG00000007718	-	52	50.976	Pygocentrus_nattereri
ENSORLG00015004425	-	53	46.264	ENSRNOG00000001194	Rrp1b	65	45.528	Rattus_norvegicus
ENSORLG00015004425	-	56	47.244	ENSRBIG00000041689	RRP1B	64	45.968	Rhinopithecus_bieti
ENSORLG00015004425	-	56	47.244	ENSRROG00000031499	RRP1B	65	46.257	Rhinopithecus_roxellana
ENSORLG00015004425	-	54	44.193	ENSSBOG00000034727	RRP1B	66	42.776	Saimiri_boliviensis_boliviensis
ENSORLG00015004425	-	62	50.276	ENSSHAG00000017789	RRP1B	67	48.794	Sarcophilus_harrisii
ENSORLG00015004425	-	53	56.083	ENSSFOG00015003932	-	55	55.462	Scleropages_formosus
ENSORLG00015004425	-	57	47.191	ENSSPUG00000002834	RRP1B	69	45.592	Sphenodon_punctatus
ENSORLG00015004425	-	54	52.874	ENSSSCG00000021698	RRP1B	67	53.086	Sus_scrofa
ENSORLG00015004425	-	54	49.849	ENSTGUG00000005926	RRP1B	65	48.308	Taeniopygia_guttata
ENSORLG00015004425	-	51	64.444	ENSTNIG00000005053	rrp1	71	63.043	Tetraodon_nigroviridis
ENSORLG00015004425	-	55	44.034	ENSTBEG00000000422	RRP1B	83	43.768	Tupaia_belangeri
ENSORLG00015004425	-	56	44.652	ENSTTRG00000000723	RRP1B	67	44.652	Tursiops_truncatus
ENSORLG00015004425	-	56	46.381	ENSUAMG00000026765	RRP1B	71	45.845	Ursus_americanus
ENSORLG00015004425	-	51	46.721	ENSUMAG00000025510	RRP1B	85	45.902	Ursus_maritimus
ENSORLG00015004425	-	51	45.600	ENSVVUG00000024509	RRP1B	63	45.600	Vulpes_vulpes
ENSORLG00015004425	-	52	47.268	ENSXETG00000013683	rrp1b	70	46.237	Xenopus_tropicalis
ENSORLG00015004425	-	65	62.981	ENSXMAG00000023123	-	69	62.892	Xiphophorus_maculatus