EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004487 (Gene tree)
Gene ID: -
Gene Symbol: ddx42
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 42
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 8061 bases
Position: chr8:4233006-4241066
Accession: ZDB-GENE-050706-53
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015024098	ResIII	PF04851.15	1.2e-06	1	1
ENSORLP00015024077	ResIII	PF04851.15	1.9e-06	1	1
ENSORLP00015024077	DEAD	PF00270.29	4.3e-48	1	1
ENSORLP00015024098	DEAD	PF00270.29	4.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015008814	-	3687	-	ENSORLP00015024098	904 (aa)	-	-
ENSORLT00015008858	-	2643	-	ENSORLP00015024077	880 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004487	ddx42	65	40.970	ENSORLG00015007282	ddx46	60	40.704
ENSORLG00015004487	ddx42	50	38.013	ENSORLG00015011446	-	69	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004487	ddx42	100	69.619	ENSG00000198231	DDX42	98	77.551	Homo_sapiens
ENSORLG00015004487	ddx42	91	91.063	ENSAPOG00000017675	ddx42	99	88.989	Acanthochromis_polyacanthus
ENSORLG00015004487	ddx42	100	71.519	ENSAMEG00000003200	DDX42	100	71.036	Ailuropoda_melanoleuca
ENSORLG00015004487	ddx42	84	89.570	ENSACIG00000007376	ddx42	99	90.222	Amphilophus_citrinellus
ENSORLG00015004487	ddx42	100	87.622	ENSAOCG00000003520	ddx42	100	88.575	Amphiprion_ocellaris
ENSORLG00015004487	ddx42	100	89.204	ENSAPEG00000000984	ddx42	100	89.727	Amphiprion_percula
ENSORLG00015004487	ddx42	100	87.322	ENSATEG00000022920	ddx42	100	88.306	Anabas_testudineus
ENSORLG00015004487	ddx42	100	71.383	ENSAPLG00000010544	DDX42	100	70.957	Anas_platyrhynchos
ENSORLG00015004487	ddx42	100	73.019	ENSACAG00000003994	DDX42	99	71.966	Anolis_carolinensis
ENSORLG00015004487	ddx42	100	71.732	ENSANAG00000035693	DDX42	98	76.890	Aotus_nancymaae
ENSORLG00015004487	ddx42	100	86.703	ENSACLG00000025113	ddx42	100	89.219	Astatotilapia_calliptera
ENSORLG00015004487	ddx42	81	86.179	ENSAMXG00000011435	ddx42	100	76.562	Astyanax_mexicanus
ENSORLG00015004487	ddx42	100	71.634	ENSBTAG00000021058	DDX42	90	80.000	Bos_taurus
ENSORLG00015004487	ddx42	66	52.987	WBGene00008119	C46F11.4	87	47.645	Caenorhabditis_elegans
ENSORLG00015004487	ddx42	100	71.233	ENSCJAG00000019649	DDX42	97	81.625	Callithrix_jacchus
ENSORLG00015004487	ddx42	100	71.730	ENSCAFG00000012818	DDX42	100	70.719	Canis_familiaris
ENSORLG00015004487	ddx42	100	71.730	ENSCAFG00020026631	DDX42	100	70.719	Canis_lupus_dingo
ENSORLG00015004487	ddx42	100	72.414	ENSCHIG00000014431	DDX42	100	71.610	Capra_hircus
ENSORLG00015004487	ddx42	100	70.794	ENSTSYG00000001380	DDX42	100	70.414	Carlito_syrichta
ENSORLG00015004487	ddx42	74	60.850	ENSCAPG00000013621	DDX42	86	63.291	Cavia_aperea
ENSORLG00015004487	ddx42	100	71.111	ENSCPOG00000005633	DDX42	100	71.291	Cavia_porcellus
ENSORLG00015004487	ddx42	100	66.737	ENSCCAG00000020612	DDX42	87	83.360	Cebus_capucinus
ENSORLG00015004487	ddx42	100	71.670	ENSCATG00000030490	DDX42	100	70.719	Cercocebus_atys
ENSORLG00015004487	ddx42	100	72.340	ENSCLAG00000003497	DDX42	100	71.580	Chinchilla_lanigera
ENSORLG00015004487	ddx42	100	66.667	ENSCSAG00000003914	DDX42	100	67.223	Chlorocebus_sabaeus
ENSORLG00015004487	ddx42	64	83.929	ENSCHOG00000006241	DDX42	61	85.455	Choloepus_hoffmanni
ENSORLG00015004487	ddx42	100	72.794	ENSCPBG00000026682	DDX42	100	71.878	Chrysemys_picta_bellii
ENSORLG00015004487	ddx42	50	66.140	ENSCING00000001837	-	96	66.140	Ciona_intestinalis
ENSORLG00015004487	ddx42	100	71.670	ENSCANG00000034663	DDX42	89	83.307	Colobus_angolensis_palliatus
ENSORLG00015004487	ddx42	100	71.748	ENSCGRG00001009775	Ddx42	100	71.215	Cricetulus_griseus_chok1gshd
ENSORLG00015004487	ddx42	100	71.748	ENSCGRG00000011718	Ddx42	100	71.215	Cricetulus_griseus_crigri
ENSORLG00015004487	ddx42	100	86.623	ENSCSEG00000021574	ddx42	100	86.369	Cynoglossus_semilaevis
ENSORLG00015004487	ddx42	100	87.445	ENSCVAG00000011404	ddx42	100	88.656	Cyprinodon_variegatus
ENSORLG00015004487	ddx42	100	78.028	ENSDARG00000037928	ddx42	100	77.527	Danio_rerio
ENSORLG00015004487	ddx42	100	68.870	ENSDNOG00000007961	DDX42	100	68.917	Dasypus_novemcinctus
ENSORLG00015004487	ddx42	100	65.319	ENSDORG00000004199	Ddx42	100	63.732	Dipodomys_ordii
ENSORLG00015004487	ddx42	68	60.064	FBgn0036104	CG6418	83	57.335	Drosophila_melanogaster
ENSORLG00015004487	ddx42	86	71.959	ENSEBUG00000001155	ddx42	92	72.222	Eptatretus_burgeri
ENSORLG00015004487	ddx42	100	71.895	ENSEASG00005013089	DDX42	89	82.884	Equus_asinus_asinus
ENSORLG00015004487	ddx42	100	71.368	ENSECAG00000022684	DDX42	100	70.052	Equus_caballus
ENSORLG00015004487	ddx42	60	84.356	ENSEEUG00000009144	DDX42	73	88.571	Erinaceus_europaeus
ENSORLG00015004487	ddx42	100	78.953	ENSELUG00000020593	ddx42	100	77.802	Esox_lucius
ENSORLG00015004487	ddx42	100	70.917	ENSFCAG00000003499	DDX42	100	71.036	Felis_catus
ENSORLG00015004487	ddx42	92	75.416	ENSFALG00000004675	DDX42	66	81.092	Ficedula_albicollis
ENSORLG00015004487	ddx42	100	71.762	ENSFDAG00000020516	DDX42	100	71.413	Fukomys_damarensis
ENSORLG00015004487	ddx42	100	88.009	ENSFHEG00000023290	ddx42	100	89.439	Fundulus_heteroclitus
ENSORLG00015004487	ddx42	78	83.711	ENSGMOG00000004595	ddx42	88	83.428	Gadus_morhua
ENSORLG00015004487	ddx42	100	71.158	ENSGALG00000000581	DDX42	100	69.979	Gallus_gallus
ENSORLG00015004487	ddx42	95	88.386	ENSGAFG00000011846	ddx42	97	89.002	Gambusia_affinis
ENSORLG00015004487	ddx42	100	81.339	ENSGACG00000009782	ddx42	100	78.408	Gasterosteus_aculeatus
ENSORLG00015004487	ddx42	100	73.081	ENSGAGG00000024411	DDX42	99	71.744	Gopherus_agassizii
ENSORLG00015004487	ddx42	100	71.564	ENSGGOG00000006779	DDX42	100	70.613	Gorilla_gorilla
ENSORLG00015004487	ddx42	100	86.593	ENSHBUG00000008705	ddx42	100	89.109	Haplochromis_burtoni
ENSORLG00015004487	ddx42	100	69.556	ENSHGLG00000010024	DDX42	100	68.251	Heterocephalus_glaber_female
ENSORLG00015004487	ddx42	94	54.745	ENSHGLG00100007138	-	78	60.754	Heterocephalus_glaber_male
ENSORLG00015004487	ddx42	100	71.097	ENSHGLG00100004479	-	100	70.285	Heterocephalus_glaber_male
ENSORLG00015004487	ddx42	100	76.185	ENSHCOG00000003357	ddx42	100	77.619	Hippocampus_comes
ENSORLG00015004487	ddx42	100	76.035	ENSIPUG00000013327	ddx42	100	76.882	Ictalurus_punctatus
ENSORLG00015004487	ddx42	100	71.762	ENSSTOG00000008922	DDX42	100	71.005	Ictidomys_tridecemlineatus
ENSORLG00015004487	ddx42	100	72.336	ENSJJAG00000011727	Ddx42	100	71.261	Jaculus_jaculus
ENSORLG00015004487	ddx42	100	87.118	ENSKMAG00000009914	ddx42	100	87.076	Kryptolebias_marmoratus
ENSORLG00015004487	ddx42	100	77.607	ENSLBEG00000004687	ddx42	100	77.765	Labrus_bergylta
ENSORLG00015004487	ddx42	99	72.737	ENSLACG00000013476	DDX42	97	72.395	Latimeria_chalumnae
ENSORLG00015004487	ddx42	100	79.913	ENSLOCG00000011764	ddx42	100	79.805	Lepisosteus_oculatus
ENSORLG00015004487	ddx42	100	70.433	ENSLAFG00000003249	DDX42	100	70.842	Loxodonta_africana
ENSORLG00015004487	ddx42	100	71.746	ENSMFAG00000031356	DDX42	100	70.084	Macaca_fascicularis
ENSORLG00015004487	ddx42	100	71.975	ENSMMUG00000016762	DDX42	100	70.199	Macaca_mulatta
ENSORLG00015004487	ddx42	100	71.746	ENSMNEG00000038250	DDX42	100	70.084	Macaca_nemestrina
ENSORLG00015004487	ddx42	100	69.794	ENSMLEG00000043080	DDX42	100	70.409	Mandrillus_leucophaeus
ENSORLG00015004487	ddx42	91	89.952	ENSMAMG00000021888	ddx42	98	87.554	Mastacembelus_armatus
ENSORLG00015004487	ddx42	100	86.703	ENSMZEG00005023103	ddx42	100	89.219	Maylandia_zebra
ENSORLG00015004487	ddx42	100	71.263	ENSMGAG00000001822	DDX42	100	69.326	Meleagris_gallopavo
ENSORLG00015004487	ddx42	77	77.151	ENSMAUG00000020774	-	94	76.446	Mesocricetus_auratus
ENSORLG00015004487	ddx42	100	71.809	ENSMICG00000009952	DDX42	100	70.594	Microcebus_murinus
ENSORLG00015004487	ddx42	100	72.425	ENSMOCG00000015504	Ddx42	100	70.414	Microtus_ochrogaster
ENSORLG00015004487	ddx42	93	84.048	ENSMMOG00000016963	ddx42	85	84.896	Mola_mola
ENSORLG00015004487	ddx42	51	84.222	ENSMODG00000009917	-	98	84.222	Monodelphis_domestica
ENSORLG00015004487	ddx42	100	88.631	ENSMALG00000007800	ddx42	100	88.411	Monopterus_albus
ENSORLG00015004487	ddx42	100	71.762	MGP_CAROLIEiJ_G0017314	Ddx42	100	70.701	Mus_caroli
ENSORLG00015004487	ddx42	100	71.762	ENSMUSG00000020705	Ddx42	100	70.701	Mus_musculus
ENSORLG00015004487	ddx42	74	85.185	MGP_PahariEiJ_G0018444	-	95	85.246	Mus_pahari
ENSORLG00015004487	ddx42	100	71.868	MGP_SPRETEiJ_G0018158	Ddx42	100	70.807	Mus_spretus
ENSORLG00015004487	ddx42	100	70.031	ENSMPUG00000014921	DDX42	100	70.495	Mustela_putorius_furo
ENSORLG00015004487	ddx42	100	70.052	ENSMLUG00000011645	DDX42	100	70.188	Myotis_lucifugus
ENSORLG00015004487	ddx42	100	72.484	ENSNGAG00000021897	Ddx42	100	71.612	Nannospalax_galili
ENSORLG00015004487	ddx42	100	85.810	ENSNBRG00000004466	ddx42	100	87.598	Neolamprologus_brichardi
ENSORLG00015004487	ddx42	100	71.746	ENSNLEG00000004248	DDX42	99	76.562	Nomascus_leucogenys
ENSORLG00015004487	ddx42	76	71.062	ENSMEUG00000013227	-	71	70.548	Notamacropus_eugenii
ENSORLG00015004487	ddx42	100	70.899	ENSOPRG00000014960	DDX42	100	70.390	Ochotona_princeps
ENSORLG00015004487	ddx42	100	68.936	ENSODEG00000007810	DDX42	100	68.187	Octodon_degus
ENSORLG00015004487	ddx42	100	86.469	ENSONIG00000000734	ddx42	100	89.219	Oreochromis_niloticus
ENSORLG00015004487	ddx42	60	83.148	ENSOANG00000000265	DDX42	100	83.148	Ornithorhynchus_anatinus
ENSORLG00015004487	ddx42	95	72.829	ENSOCUG00000004304	DDX42	87	71.194	Oryctolagus_cuniculus
ENSORLG00015004487	ddx42	100	99.226	ENSORLG00000002395	ddx42	100	98.523	Oryzias_latipes
ENSORLG00015004487	ddx42	100	99.336	ENSORLG00020011621	ddx42	100	99.336	Oryzias_latipes_hni
ENSORLG00015004487	ddx42	100	93.149	ENSOMEG00000020093	ddx42	100	93.149	Oryzias_melastigma
ENSORLG00015004487	ddx42	100	70.978	ENSOGAG00000006872	DDX42	100	69.990	Otolemur_garnettii
ENSORLG00015004487	ddx42	100	70.711	ENSOARG00000013540	DDX42	100	69.112	Ovis_aries
ENSORLG00015004487	ddx42	100	71.564	ENSPPAG00000007496	DDX42	98	76.571	Pan_paniscus
ENSORLG00015004487	ddx42	100	70.917	ENSPPRG00000002740	DDX42	100	71.036	Panthera_pardus
ENSORLG00015004487	ddx42	100	70.557	ENSPTIG00000009932	DDX42	100	71.036	Panthera_tigris_altaica
ENSORLG00015004487	ddx42	100	71.564	ENSPTRG00000009523	DDX42	98	76.571	Pan_troglodytes
ENSORLG00015004487	ddx42	100	71.776	ENSPANG00000020990	DDX42	100	70.825	Papio_anubis
ENSORLG00015004487	ddx42	100	77.228	ENSPKIG00000002901	ddx42	100	76.242	Paramormyrops_kingsleyae
ENSORLG00015004487	ddx42	86	79.293	ENSPSIG00000010289	DDX42	94	79.284	Pelodiscus_sinensis
ENSORLG00015004487	ddx42	100	82.957	ENSPMGG00000009323	ddx42	100	83.445	Periophthalmus_magnuspinnatus
ENSORLG00015004487	ddx42	100	70.374	ENSPEMG00000006755	Ddx42	100	70.732	Peromyscus_maniculatus_bairdii
ENSORLG00015004487	ddx42	86	70.860	ENSPMAG00000005580	ddx42	99	72.215	Petromyzon_marinus
ENSORLG00015004487	ddx42	100	71.639	ENSPCIG00000009093	DDX42	100	70.074	Phascolarctos_cinereus
ENSORLG00015004487	ddx42	100	86.159	ENSPFOG00000014104	ddx42	100	87.339	Poecilia_formosa
ENSORLG00015004487	ddx42	100	85.944	ENSPLAG00000010522	ddx42	100	87.124	Poecilia_latipinna
ENSORLG00015004487	ddx42	100	86.277	ENSPMEG00000010744	ddx42	100	86.915	Poecilia_mexicana
ENSORLG00015004487	ddx42	100	85.353	ENSPREG00000009926	ddx42	100	86.392	Poecilia_reticulata
ENSORLG00015004487	ddx42	100	68.046	ENSPPYG00000008531	DDX42	100	68.163	Pongo_abelii
ENSORLG00015004487	ddx42	92	65.984	ENSPCAG00000002474	DDX42	100	65.870	Procavia_capensis
ENSORLG00015004487	ddx42	100	62.728	ENSPCOG00000001559	DDX42	89	73.651	Propithecus_coquereli
ENSORLG00015004487	ddx42	100	69.394	ENSPVAG00000000160	DDX42	100	66.393	Pteropus_vampyrus
ENSORLG00015004487	ddx42	84	84.505	ENSPNYG00000013954	ddx42	97	87.353	Pundamilia_nyererei
ENSORLG00015004487	ddx42	88	81.235	ENSPNAG00000017352	ddx42	100	76.891	Pygocentrus_nattereri
ENSORLG00015004487	ddx42	100	71.902	ENSRNOG00000009474	Ddx42	100	70.594	Rattus_norvegicus
ENSORLG00015004487	ddx42	100	71.670	ENSRBIG00000004781	DDX42	89	83.307	Rhinopithecus_bieti
ENSORLG00015004487	ddx42	100	71.670	ENSRROG00000029794	DDX42	100	70.719	Rhinopithecus_roxellana
ENSORLG00015004487	ddx42	100	71.203	ENSSBOG00000029624	DDX42	98	76.529	Saimiri_boliviensis_boliviensis
ENSORLG00015004487	ddx42	71	49.548	ENSSHAG00000007919	-	99	48.795	Sarcophilus_harrisii
ENSORLG00015004487	ddx42	100	71.849	ENSSHAG00000012896	-	100	70.168	Sarcophilus_harrisii
ENSORLG00015004487	ddx42	86	84.635	ENSSFOG00015014064	ddx42	80	87.166	Scleropages_formosus
ENSORLG00015004487	ddx42	100	88.596	ENSSMAG00000009077	ddx42	100	88.503	Scophthalmus_maximus
ENSORLG00015004487	ddx42	100	88.706	ENSSDUG00000022221	ddx42	100	88.925	Seriola_dumerili
ENSORLG00015004487	ddx42	100	87.748	ENSSLDG00000018483	ddx42	100	87.528	Seriola_lalandi_dorsalis
ENSORLG00015004487	ddx42	100	69.529	ENSSARG00000009847	DDX42	100	70.011	Sorex_araneus
ENSORLG00015004487	ddx42	100	72.660	ENSSPUG00000018806	DDX42	100	71.825	Sphenodon_punctatus
ENSORLG00015004487	ddx42	100	89.560	ENSSPAG00000013055	ddx42	100	89.890	Stegastes_partitus
ENSORLG00015004487	ddx42	85	70.690	ENSSSCG00000017289	DDX42	97	70.065	Sus_scrofa
ENSORLG00015004487	ddx42	100	72.534	ENSTGUG00000001931	DDX42	100	70.988	Taeniopygia_guttata
ENSORLG00015004487	ddx42	100	84.547	ENSTRUG00000010711	ddx42	99	90.135	Takifugu_rubripes
ENSORLG00015004487	ddx42	83	76.964	ENSTBEG00000010159	DDX42	98	76.698	Tupaia_belangeri
ENSORLG00015004487	ddx42	100	71.504	ENSTTRG00000006962	DDX42	100	71.156	Tursiops_truncatus
ENSORLG00015004487	ddx42	100	71.519	ENSUAMG00000007321	DDX42	100	71.036	Ursus_americanus
ENSORLG00015004487	ddx42	100	71.398	ENSUMAG00000017438	DDX42	100	70.913	Ursus_maritimus
ENSORLG00015004487	ddx42	94	72.848	ENSVPAG00000009633	DDX42	94	72.848	Vicugna_pacos
ENSORLG00015004487	ddx42	100	70.650	ENSVVUG00000006095	DDX42	100	71.142	Vulpes_vulpes
ENSORLG00015004487	ddx42	100	70.961	ENSXETG00000003245	ddx42	100	70.116	Xenopus_tropicalis
ENSORLG00015004487	ddx42	84	89.935	ENSXCOG00000017560	ddx42	97	90.719	Xiphophorus_couchianus
ENSORLG00015004487	ddx42	100	90.066	ENSXMAG00000008138	ddx42	100	90.508	Xiphophorus_maculatus