EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004739 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: -
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9972 bases
Position: chr20:9197485-9207456
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015003974	MMR_HSR1	PF01926.23	9.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015008362	-	2290	-	ENSORLP00015003974	204 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004739	rab18a	95	36.816	ENSORLG00015006162	rab6a	84	39.106
ENSORLG00015004739	rab18a	88	44.751	ENSORLG00015015518	-	90	44.751
ENSORLG00015004739	rab18a	80	42.424	ENSORLG00015004377	RAB15	79	42.424
ENSORLG00015004739	rab18a	88	42.162	ENSORLG00015014594	rab3db	77	43.275
ENSORLG00015004739	rab18a	79	33.533	ENSORLG00015020441	-	82	33.533
ENSORLG00015004739	rab18a	65	30.597	ENSORLG00015020012	arl5a	61	30.597
ENSORLG00015004739	rab18a	86	35.754	ENSORLG00015014268	rabl2	77	35.754
ENSORLG00015004739	rab18a	77	32.099	ENSORLG00015001298	rhebl1	85	32.099
ENSORLG00015004739	rab18a	84	48.837	ENSORLG00015010042	rab35b	95	45.596
ENSORLG00015004739	rab18a	83	39.535	ENSORLG00015022289	-	81	39.535
ENSORLG00015004739	rab18a	77	32.716	ENSORLG00015002191	rheb	78	34.899
ENSORLG00015004739	rab18a	81	42.771	ENSORLG00015019569	rab25b	81	43.750
ENSORLG00015004739	rab18a	83	39.766	ENSORLG00015006970	rab6ba	80	39.766
ENSORLG00015004739	rab18a	79	50.617	ENSORLG00015000618	-	80	50.617
ENSORLG00015004739	rab18a	79	32.317	ENSORLG00015002284	rerg	81	32.317
ENSORLG00015004739	rab18a	93	36.923	ENSORLG00015016047	zgc:101559	63	41.497
ENSORLG00015004739	rab18a	91	38.424	ENSORLG00015012872	rab33ba	62	42.857
ENSORLG00015004739	rab18a	84	36.628	ENSORLG00015004033	rab23	75	37.662
ENSORLG00015004739	rab18a	94	40.609	ENSORLG00015013564	-	85	43.529
ENSORLG00015004739	rab18a	80	37.725	ENSORLG00015006820	-	81	37.725
ENSORLG00015004739	rab18a	80	45.122	ENSORLG00015020173	rab11bb	74	45.679
ENSORLG00015004739	rab18a	82	35.294	ENSORLG00015008252	si:ch73-116o1.2	81	35.294
ENSORLG00015004739	rab18a	79	45.679	ENSORLG00015016946	rab11ba	61	45.679
ENSORLG00015004739	rab18a	95	44.712	ENSORLG00015020900	rab2a	85	47.826
ENSORLG00015004739	rab18a	79	47.561	ENSORLG00015007869	rab12	67	47.561
ENSORLG00015004739	rab18a	79	50.617	ENSORLG00015010098	zgc:171927	85	48.066
ENSORLG00015004739	rab18a	79	45.062	ENSORLG00015010257	rab11a	75	45.062
ENSORLG00015004739	rab18a	89	31.053	ENSORLG00015000584	rab34b	70	31.053
ENSORLG00015004739	rab18a	79	45.679	ENSORLG00015016999	RAB11B	74	45.679
ENSORLG00015004739	rab18a	84	50.867	ENSORLG00015020972	rab30	84	50.867
ENSORLG00015004739	rab18a	80	43.636	ENSORLG00015021900	rab5c	82	41.667
ENSORLG00015004739	rab18a	83	38.728	ENSORLG00015010161	RAB41	79	38.728
ENSORLG00015004739	rab18a	80	47.273	ENSORLG00015000893	-	76	47.273
ENSORLG00015004739	rab18a	87	30.601	ENSORLG00015010289	rras	81	34.591
ENSORLG00015004739	rab18a	99	83.824	ENSORLG00015007182	rab18b	93	84.817
ENSORLG00015004739	rab18a	82	42.012	ENSORLG00015012725	rab25a	56	42.012
ENSORLG00015004739	rab18a	72	42.763	ENSORLG00015013453	-	63	42.763
ENSORLG00015004739	rab18a	80	37.725	ENSORLG00015002344	-	81	37.725
ENSORLG00015004739	rab18a	90	40.741	ENSORLG00015012854	rab5aa	86	40.741
ENSORLG00015004739	rab18a	80	48.485	ENSORLG00015006881	rab14	76	48.485
ENSORLG00015004739	rab18a	80	43.293	ENSORLG00015000142	si:dkey-34d22.5	75	43.293
ENSORLG00015004739	rab18a	96	41.837	ENSORLG00015019591	rab11al	78	44.379
ENSORLG00015004739	rab18a	89	31.522	ENSORLG00015011467	kras	97	31.522
ENSORLG00015004739	rab18a	80	39.394	ENSORLG00015004273	rab42a	76	39.394
ENSORLG00015004739	rab18a	95	46.154	ENSORLG00015010986	rab1ab	80	50.617
ENSORLG00015004739	rab18a	82	44.048	ENSORLG00015013638	rab15	77	44.048
ENSORLG00015004739	rab18a	83	39.766	ENSORLG00015013537	rab6bb	80	39.766
ENSORLG00015004739	rab18a	80	43.030	ENSORLG00015017737	rab5ab	86	40.642
ENSORLG00015004739	rab18a	79	32.530	ENSORLG00015010005	dnajc27	61	32.530
ENSORLG00015004739	rab18a	78	31.515	ENSORLG00015006780	-	87	31.515
ENSORLG00015004739	rab18a	93	35.938	ENSORLG00015015121	si:dkey-13a21.4	94	35.938
ENSORLG00015004739	rab18a	84	38.728	ENSORLG00015003202	RAB39B	81	38.728
ENSORLG00015004739	rab18a	71	42.857	ENSORLG00015015327	rab33a	53	42.857
ENSORLG00015004739	rab18a	80	39.286	ENSORLG00015004265	rab9b	80	38.690
ENSORLG00015004739	rab18a	85	32.955	ENSORLG00015014829	rab34a	66	32.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004739	rab18a	100	95.098	ENSAPOG00000010760	rab18a	94	95.312	Acanthochromis_polyacanthus
ENSORLG00015004739	rab18a	100	84.804	ENSACIG00000009617	rab18a	93	84.375	Amphilophus_citrinellus
ENSORLG00015004739	rab18a	100	95.588	ENSAOCG00000016233	rab18a	94	95.833	Amphiprion_ocellaris
ENSORLG00015004739	rab18a	100	95.588	ENSAPEG00000005392	rab18a	94	95.833	Amphiprion_percula
ENSORLG00015004739	rab18a	100	94.118	ENSATEG00000021911	rab18a	94	94.271	Anabas_testudineus
ENSORLG00015004739	rab18a	100	85.366	ENSACAG00000005463	-	94	87.047	Anolis_carolinensis
ENSORLG00015004739	rab18a	100	96.078	ENSACLG00000011484	rab18a	100	96.078	Astatotilapia_calliptera
ENSORLG00015004739	rab18a	96	68.657	ENSCPBG00000027619	-	89	71.667	Chrysemys_picta_bellii
ENSORLG00015004739	rab18a	100	83.981	ENSCPBG00000015839	-	93	86.387	Chrysemys_picta_bellii
ENSORLG00015004739	rab18a	97	72.362	ENSCING00000006838	-	90	76.667	Ciona_intestinalis
ENSORLG00015004739	rab18a	97	71.357	ENSCSAVG00000010348	-	97	72.021	Ciona_savignyi
ENSORLG00015004739	rab18a	100	94.118	ENSCSEG00000011816	rab18a	94	94.271	Cynoglossus_semilaevis
ENSORLG00015004739	rab18a	96	94.898	ENSCVAG00000015451	rab18a	96	94.898	Cyprinodon_variegatus
ENSORLG00015004739	rab18a	100	80.000	ENSDARG00000055291	rab18a	92	83.069	Danio_rerio
ENSORLG00015004739	rab18a	100	90.244	ENSELUG00000003805	rab18a	93	90.576	Esox_lucius
ENSORLG00015004739	rab18a	100	96.078	ENSFHEG00000019455	rab18a	100	96.078	Fundulus_heteroclitus
ENSORLG00015004739	rab18a	94	95.288	ENSGAFG00000002790	rab18a	94	95.312	Gambusia_affinis
ENSORLG00015004739	rab18a	100	83.981	ENSGAGG00000015642	-	93	86.387	Gopherus_agassizii
ENSORLG00015004739	rab18a	100	96.078	ENSHBUG00000001518	rab18a	100	96.078	Haplochromis_burtoni
ENSORLG00015004739	rab18a	99	95.567	ENSLBEG00000005861	rab18a	90	95.833	Labrus_bergylta
ENSORLG00015004739	rab18a	93	87.368	ENSLACG00000009310	rab18a	92	87.368	Latimeria_chalumnae
ENSORLG00015004739	rab18a	100	87.805	ENSLOCG00000007491	rab18a	93	87.958	Lepisosteus_oculatus
ENSORLG00015004739	rab18a	100	93.137	ENSMAMG00000014320	rab18a	94	93.229	Mastacembelus_armatus
ENSORLG00015004739	rab18a	100	95.588	ENSMZEG00005017235	rab18a	94	96.354	Maylandia_zebra
ENSORLG00015004739	rab18a	100	94.608	ENSMALG00000009813	rab18a	94	94.792	Monopterus_albus
ENSORLG00015004739	rab18a	100	96.078	ENSNBRG00000013507	rab18a	100	96.078	Neolamprologus_brichardi
ENSORLG00015004739	rab18a	100	99.510	ENSORLG00000004624	rab18a	100	99.510	Oryzias_latipes
ENSORLG00015004739	rab18a	100	99.020	ENSORLG00020008333	rab18a	100	99.020	Oryzias_latipes_hni
ENSORLG00015004739	rab18a	100	98.039	ENSOMEG00000020605	rab18a	100	98.039	Oryzias_melastigma
ENSORLG00015004739	rab18a	100	86.341	ENSPKIG00000009825	rab18a	92	89.418	Paramormyrops_kingsleyae
ENSORLG00015004739	rab18a	100	92.157	ENSPMGG00000020409	-	94	92.708	Periophthalmus_magnuspinnatus
ENSORLG00015004739	rab18a	94	95.812	ENSPFOG00000007571	rab18a	94	95.833	Poecilia_formosa
ENSORLG00015004739	rab18a	94	95.812	ENSPLAG00000010104	rab18a	94	95.833	Poecilia_latipinna
ENSORLG00015004739	rab18a	94	95.812	ENSPMEG00000013085	rab18a	94	95.833	Poecilia_mexicana
ENSORLG00015004739	rab18a	94	95.812	ENSPREG00000005923	rab18a	78	95.833	Poecilia_reticulata
ENSORLG00015004739	rab18a	100	96.078	ENSPNYG00000007064	rab18a	100	96.078	Pundamilia_nyererei
ENSORLG00015004739	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.158	Pygocentrus_nattereri
ENSORLG00015004739	rab18a	100	89.756	ENSSFOG00015017444	rab18a	78	90.526	Scleropages_formosus
ENSORLG00015004739	rab18a	94	93.264	ENSSMAG00000002969	rab18a	94	93.264	Scophthalmus_maximus
ENSORLG00015004739	rab18a	100	95.098	ENSSDUG00000003823	rab18a	100	95.098	Seriola_dumerili
ENSORLG00015004739	rab18a	100	95.098	ENSSLDG00000006977	rab18a	100	95.098	Seriola_lalandi_dorsalis
ENSORLG00015004739	rab18a	93	87.831	ENSSPUG00000017677	-	92	87.368	Sphenodon_punctatus
ENSORLG00015004739	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	91.146	Takifugu_rubripes
ENSORLG00015004739	rab18a	100	86.408	ENSUMAG00000015574	-	91	89.362	Ursus_maritimus
ENSORLG00015004739	rab18a	100	85.922	ENSXETG00000004556	rab18	93	88.021	Xenopus_tropicalis
ENSORLG00015004739	rab18a	94	95.812	ENSXMAG00000024122	rab18a	94	95.833	Xiphophorus_maculatus