EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004961 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: zgc:56699
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3204 bases
Position: chr7:22843136-22846339
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015004197	zf-U11-48K	PF05253.12	1.8e-16	1	2
ENSORLP00015004197	zf-U11-48K	PF05253.12	1.8e-16	2	2
ENSORLP00015004203	zf-U11-48K	PF05253.12	1.8e-16	1	2
ENSORLP00015004203	zf-U11-48K	PF05253.12	1.8e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015007994	-	1278	-	ENSORLP00015004197	173 (aa)	-	-
ENSORLT00015007979	-	1706	-	ENSORLP00015004203	173 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004961	zgc:56699	98	42.373	ENSORLG00015005017	-	96	54.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004961	zgc:56699	95	50.000	ENSAPOG00000021951	-	96	50.000	Acanthochromis_polyacanthus
ENSORLG00015004961	zgc:56699	79	56.204	ENSAPOG00000000311	-	80	56.204	Acanthochromis_polyacanthus
ENSORLG00015004961	zgc:56699	100	52.809	ENSACIG00000013400	zgc:56699	100	52.809	Amphilophus_citrinellus
ENSORLG00015004961	zgc:56699	95	49.708	ENSAOCG00000013650	-	96	49.708	Amphiprion_ocellaris
ENSORLG00015004961	zgc:56699	95	42.604	ENSAPEG00000006689	zgc:56699	95	42.604	Amphiprion_percula
ENSORLG00015004961	zgc:56699	99	55.866	ENSATEG00000024058	zgc:56699	99	55.866	Anabas_testudineus
ENSORLG00015004961	zgc:56699	99	52.747	ENSACLG00000023562	zgc:56699	92	52.747	Astatotilapia_calliptera
ENSORLG00015004961	zgc:56699	78	43.151	ENSAMXG00000036095	-	61	45.890	Astyanax_mexicanus
ENSORLG00015004961	zgc:56699	97	48.603	ENSAMXG00000038346	zgc:56699	99	48.603	Astyanax_mexicanus
ENSORLG00015004961	zgc:56699	97	52.299	ENSCSEG00000021520	zgc:56699	83	52.299	Cynoglossus_semilaevis
ENSORLG00015004961	zgc:56699	83	51.049	ENSCVAG00000009972	zgc:56699	77	51.049	Cyprinodon_variegatus
ENSORLG00015004961	zgc:56699	94	44.382	ENSDARG00000000887	zgc:56699	97	44.382	Danio_rerio
ENSORLG00015004961	zgc:56699	83	43.312	ENSDARG00000099586	CR382383.2	85	43.312	Danio_rerio
ENSORLG00015004961	zgc:56699	64	44.643	ENSEBUG00000005577	-	60	44.643	Eptatretus_burgeri
ENSORLG00015004961	zgc:56699	95	47.486	ENSELUG00000003242	gtsf1	97	47.486	Esox_lucius
ENSORLG00015004961	zgc:56699	98	51.412	ENSFHEG00000006036	zgc:56699	98	46.857	Fundulus_heteroclitus
ENSORLG00015004961	zgc:56699	80	47.552	ENSGMOG00000007295	zgc:56699	97	47.552	Gadus_morhua
ENSORLG00015004961	zgc:56699	62	40.000	ENSGALG00000035365	-	65	40.000	Gallus_gallus
ENSORLG00015004961	zgc:56699	97	54.598	ENSGAFG00000020743	zgc:56699	97	54.598	Gambusia_affinis
ENSORLG00015004961	zgc:56699	99	52.198	ENSHBUG00000005327	zgc:56699	100	52.198	Haplochromis_burtoni
ENSORLG00015004961	zgc:56699	96	45.198	ENSHCOG00000010296	-	99	45.198	Hippocampus_comes
ENSORLG00015004961	zgc:56699	96	44.134	ENSIPUG00000011498	zgc:56699	95	43.646	Ictalurus_punctatus
ENSORLG00015004961	zgc:56699	97	54.023	ENSLBEG00000015981	zgc:56699	100	48.214	Labrus_bergylta
ENSORLG00015004961	zgc:56699	80	41.958	ENSLOCG00000004469	zgc:56699	99	41.958	Lepisosteus_oculatus
ENSORLG00015004961	zgc:56699	83	56.376	ENSMAMG00000001846	zgc:56699	84	56.376	Mastacembelus_armatus
ENSORLG00015004961	zgc:56699	99	52.747	ENSMZEG00005026479	zgc:56699	92	52.747	Maylandia_zebra
ENSORLG00015004961	zgc:56699	100	40.957	ENSMMOG00000017331	zgc:56699	100	40.957	Mola_mola
ENSORLG00015004961	zgc:56699	99	52.198	ENSNBRG00000006336	zgc:56699	100	52.198	Neolamprologus_brichardi
ENSORLG00015004961	zgc:56699	99	53.297	ENSONIG00000016720	zgc:56699	92	53.297	Oreochromis_niloticus
ENSORLG00015004961	zgc:56699	63	36.441	ENSOANG00000030381	-	74	36.441	Ornithorhynchus_anatinus
ENSORLG00015004961	zgc:56699	87	52.564	ENSORLG00000025877	-	91	52.564	Oryzias_latipes
ENSORLG00015004961	zgc:56699	100	96.532	ENSORLG00000015258	-	100	96.532	Oryzias_latipes
ENSORLG00015004961	zgc:56699	100	97.110	ENSORLG00020010990	-	100	97.110	Oryzias_latipes_hni
ENSORLG00015004961	zgc:56699	87	52.564	ENSORLG00020011013	-	91	52.564	Oryzias_latipes_hni
ENSORLG00015004961	zgc:56699	82	68.085	ENSOMEG00000013200	-	92	68.085	Oryzias_melastigma
ENSORLG00015004961	zgc:56699	100	71.676	ENSOMEG00000021739	-	100	71.676	Oryzias_melastigma
ENSORLG00015004961	zgc:56699	99	49.432	ENSOMEG00000021773	-	99	49.432	Oryzias_melastigma
ENSORLG00015004961	zgc:56699	95	46.328	ENSPKIG00000017039	zgc:56699	97	46.328	Paramormyrops_kingsleyae
ENSORLG00015004961	zgc:56699	97	50.000	ENSPMGG00000023241	zgc:56699	96	50.000	Periophthalmus_magnuspinnatus
ENSORLG00015004961	zgc:56699	64	44.262	ENSPMAG00000009653	-	93	44.262	Petromyzon_marinus
ENSORLG00015004961	zgc:56699	97	53.448	ENSPFOG00000009204	zgc:56699	97	53.448	Poecilia_formosa
ENSORLG00015004961	zgc:56699	97	51.176	ENSPLAG00000009088	zgc:56699	97	51.176	Poecilia_latipinna
ENSORLG00015004961	zgc:56699	97	53.448	ENSPMEG00000001443	zgc:56699	97	53.448	Poecilia_mexicana
ENSORLG00015004961	zgc:56699	97	55.747	ENSPREG00000000745	zgc:56699	97	55.747	Poecilia_reticulata
ENSORLG00015004961	zgc:56699	99	52.747	ENSPNYG00000002811	zgc:56699	100	52.747	Pundamilia_nyererei
ENSORLG00015004961	zgc:56699	96	47.753	ENSPNAG00000005165	zgc:56699	98	47.753	Pygocentrus_nattereri
ENSORLG00015004961	zgc:56699	85	46.497	ENSSFOG00015021600	zgc:56699	85	46.497	Scleropages_formosus
ENSORLG00015004961	zgc:56699	100	52.247	ENSSMAG00000020886	zgc:56699	100	52.247	Scophthalmus_maximus
ENSORLG00015004961	zgc:56699	99	54.444	ENSSDUG00000002033	zgc:56699	99	54.444	Seriola_dumerili
ENSORLG00015004961	zgc:56699	99	53.889	ENSSLDG00000014113	zgc:56699	99	53.889	Seriola_lalandi_dorsalis
ENSORLG00015004961	zgc:56699	86	50.641	ENSSPAG00000010005	-	99	50.641	Stegastes_partitus
ENSORLG00015004961	zgc:56699	95	56.024	ENSSPAG00000019854	-	96	56.627	Stegastes_partitus
ENSORLG00015004961	zgc:56699	98	48.571	ENSTRUG00000015537	zgc:56699	99	48.571	Takifugu_rubripes
ENSORLG00015004961	zgc:56699	83	48.966	ENSTNIG00000012515	zgc:56699	98	48.966	Tetraodon_nigroviridis
ENSORLG00015004961	zgc:56699	97	52.353	ENSXCOG00000014400	zgc:56699	86	52.353	Xiphophorus_couchianus
ENSORLG00015004961	zgc:56699	97	55.172	ENSXMAG00000011692	zgc:56699	97	55.172	Xiphophorus_maculatus