EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015004982 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 7904 bases
Position: chr18:17274555-17282458
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015024438	zf-C2H2	PF00096.26	1.5e-18	1	2
ENSORLP00015024438	zf-C2H2	PF00096.26	1.5e-18	2	2
ENSORLP00015024438	zf-met	PF12874.7	4.4e-11	1	2
ENSORLP00015024438	zf-met	PF12874.7	4.4e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015007951	-	5546	-	ENSORLP00015024438	1180 (aa)	-	-

Gene Model

Click here to download ENSORLG00015004982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015004982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015004982	si:ch211-212k18.5	54	46.729	ENSORLG00015002422	sall2	58	44.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015004982	si:ch211-212k18.5	79	39.861	ENSAPOG00000015347	sall2	56	70.270	Acanthochromis_polyacanthus
ENSORLG00015004982	si:ch211-212k18.5	99	71.358	ENSAPOG00000013387	si:ch211-212k18.5	99	71.523	Acanthochromis_polyacanthus
ENSORLG00015004982	si:ch211-212k18.5	78	79.109	ENSACIG00000019922	si:ch211-212k18.5	96	79.427	Amphilophus_citrinellus
ENSORLG00015004982	si:ch211-212k18.5	100	68.994	ENSAOCG00000010737	si:ch211-212k18.5	100	68.725	Amphiprion_ocellaris
ENSORLG00015004982	si:ch211-212k18.5	55	47.362	ENSAPEG00000020215	sall2	67	50.159	Amphiprion_percula
ENSORLG00015004982	si:ch211-212k18.5	100	69.156	ENSAPEG00000006751	si:ch211-212k18.5	100	68.887	Amphiprion_percula
ENSORLG00015004982	si:ch211-212k18.5	77	79.132	ENSATEG00000001254	si:ch211-212k18.5	100	80.070	Anabas_testudineus
ENSORLG00015004982	si:ch211-212k18.5	99	69.843	ENSACLG00000009709	si:ch211-212k18.5	99	70.637	Astatotilapia_calliptera
ENSORLG00015004982	si:ch211-212k18.5	58	67.568	ENSACLG00000019867	sall2	63	67.568	Astatotilapia_calliptera
ENSORLG00015004982	si:ch211-212k18.5	61	49.333	ENSAMXG00000020956	sall2	66	49.273	Astyanax_mexicanus
ENSORLG00015004982	si:ch211-212k18.5	95	54.350	ENSAMXG00000010979	si:ch211-212k18.5	99	52.951	Astyanax_mexicanus
ENSORLG00015004982	si:ch211-212k18.5	79	38.387	ENSCSEG00000021148	sall2	79	37.956	Cynoglossus_semilaevis
ENSORLG00015004982	si:ch211-212k18.5	99	66.914	ENSCSEG00000004426	si:ch211-212k18.5	99	66.419	Cynoglossus_semilaevis
ENSORLG00015004982	si:ch211-212k18.5	59	54.717	ENSCVAG00000006032	sall2	62	72.727	Cyprinodon_variegatus
ENSORLG00015004982	si:ch211-212k18.5	99	68.167	ENSCVAG00000007475	si:ch211-212k18.5	99	68.115	Cyprinodon_variegatus
ENSORLG00015004982	si:ch211-212k18.5	65	48.498	ENSDARG00000075116	sall2	68	48.132	Danio_rerio
ENSORLG00015004982	si:ch211-212k18.5	99	53.416	ENSDARG00000103316	si:ch211-212k18.5	98	52.303	Danio_rerio
ENSORLG00015004982	si:ch211-212k18.5	98	55.337	ENSELUG00000024534	si:ch211-212k18.5	99	54.243	Esox_lucius
ENSORLG00015004982	si:ch211-212k18.5	55	45.490	ENSFHEG00000017550	sall2	59	44.987	Fundulus_heteroclitus
ENSORLG00015004982	si:ch211-212k18.5	99	69.256	ENSFHEG00000017264	si:ch211-212k18.5	99	68.878	Fundulus_heteroclitus
ENSORLG00015004982	si:ch211-212k18.5	59	52.830	ENSGAFG00000015194	sall2	59	44.922	Gambusia_affinis
ENSORLG00015004982	si:ch211-212k18.5	100	68.791	ENSGAFG00000003746	si:ch211-212k18.5	99	68.607	Gambusia_affinis
ENSORLG00015004982	si:ch211-212k18.5	99	69.843	ENSHBUG00000019672	si:ch211-212k18.5	100	70.776	Haplochromis_burtoni
ENSORLG00015004982	si:ch211-212k18.5	58	67.568	ENSHBUG00000002882	sall2	57	67.568	Haplochromis_burtoni
ENSORLG00015004982	si:ch211-212k18.5	99	59.216	ENSHCOG00000002842	si:ch211-212k18.5	99	59.346	Hippocampus_comes
ENSORLG00015004982	si:ch211-212k18.5	97	52.071	ENSIPUG00000002559	sall2	96	50.209	Ictalurus_punctatus
ENSORLG00015004982	si:ch211-212k18.5	99	69.650	ENSKMAG00000019657	si:ch211-212k18.5	99	70.057	Kryptolebias_marmoratus
ENSORLG00015004982	si:ch211-212k18.5	63	45.384	ENSKMAG00000020172	sall2	50	72.727	Kryptolebias_marmoratus
ENSORLG00015004982	si:ch211-212k18.5	99	67.298	ENSLBEG00000020887	si:ch211-212k18.5	99	67.135	Labrus_bergylta
ENSORLG00015004982	si:ch211-212k18.5	66	45.571	ENSMAMG00000016229	sall2	62	71.429	Mastacembelus_armatus
ENSORLG00015004982	si:ch211-212k18.5	71	79.278	ENSMAMG00000015887	si:ch211-212k18.5	99	79.371	Mastacembelus_armatus
ENSORLG00015004982	si:ch211-212k18.5	58	67.568	ENSMZEG00005012103	sall2	57	67.568	Maylandia_zebra
ENSORLG00015004982	si:ch211-212k18.5	99	69.925	ENSMZEG00005021214	si:ch211-212k18.5	99	70.720	Maylandia_zebra
ENSORLG00015004982	si:ch211-212k18.5	90	78.217	ENSMMOG00000012726	si:ch211-212k18.5	98	78.217	Mola_mola
ENSORLG00015004982	si:ch211-212k18.5	92	68.975	ENSMALG00000000979	si:ch211-212k18.5	96	68.811	Monopterus_albus
ENSORLG00015004982	si:ch211-212k18.5	95	38.564	ENSNBRG00000017645	sall2	99	38.377	Neolamprologus_brichardi
ENSORLG00015004982	si:ch211-212k18.5	99	65.298	ENSNBRG00000023948	si:ch211-212k18.5	99	66.444	Neolamprologus_brichardi
ENSORLG00015004982	si:ch211-212k18.5	100	98.390	ENSORLG00000030429	si:ch211-212k18.5	100	98.390	Oryzias_latipes
ENSORLG00015004982	si:ch211-212k18.5	66	46.533	ENSORLG00000026871	sall2	61	67.568	Oryzias_latipes
ENSORLG00015004982	si:ch211-212k18.5	54	46.533	ENSORLG00020007873	sall2	58	44.906	Oryzias_latipes_hni
ENSORLG00015004982	si:ch211-212k18.5	100	98.051	ENSORLG00020008145	si:ch211-212k18.5	100	98.051	Oryzias_latipes_hni
ENSORLG00015004982	si:ch211-212k18.5	100	89.130	ENSOMEG00000013949	si:ch211-212k18.5	100	89.399	Oryzias_melastigma
ENSORLG00015004982	si:ch211-212k18.5	60	59.184	ENSOMEG00000012904	sall2	59	45.752	Oryzias_melastigma
ENSORLG00015004982	si:ch211-212k18.5	95	63.301	ENSPMGG00000018714	si:ch211-212k18.5	99	63.310	Periophthalmus_magnuspinnatus
ENSORLG00015004982	si:ch211-212k18.5	55	46.594	ENSPFOG00000016504	sall2	61	45.873	Poecilia_formosa
ENSORLG00015004982	si:ch211-212k18.5	99	69.180	ENSPFOG00000023705	si:ch211-212k18.5	99	69.539	Poecilia_formosa
ENSORLG00015004982	si:ch211-212k18.5	55	45.072	ENSPLAG00000018320	sall2	59	45.703	Poecilia_latipinna
ENSORLG00015004982	si:ch211-212k18.5	99	69.205	ENSPLAG00000002577	si:ch211-212k18.5	99	68.683	Poecilia_latipinna
ENSORLG00015004982	si:ch211-212k18.5	59	54.717	ENSPMEG00000006335	sall2	59	44.819	Poecilia_mexicana
ENSORLG00015004982	si:ch211-212k18.5	99	69.014	ENSPMEG00000016395	si:ch211-212k18.5	99	69.452	Poecilia_mexicana
ENSORLG00015004982	si:ch211-212k18.5	99	69.785	ENSPREG00000005292	si:ch211-212k18.5	99	68.931	Poecilia_reticulata
ENSORLG00015004982	si:ch211-212k18.5	61	54.717	ENSPREG00000021908	sall2	58	45.718	Poecilia_reticulata
ENSORLG00015004982	si:ch211-212k18.5	99	66.860	ENSPNYG00000021576	si:ch211-212k18.5	99	67.662	Pundamilia_nyererei
ENSORLG00015004982	si:ch211-212k18.5	95	54.966	ENSPNAG00000006123	si:ch211-212k18.5	94	54.283	Pygocentrus_nattereri
ENSORLG00015004982	si:ch211-212k18.5	64	50.769	ENSPNAG00000021463	sall2	62	61.702	Pygocentrus_nattereri
ENSORLG00015004982	si:ch211-212k18.5	100	68.130	ENSSMAG00000006241	si:ch211-212k18.5	100	67.834	Scophthalmus_maximus
ENSORLG00015004982	si:ch211-212k18.5	76	58.929	ENSSMAG00000014157	sall2	64	72.973	Scophthalmus_maximus
ENSORLG00015004982	si:ch211-212k18.5	59	57.627	ENSSDUG00000012274	sall2	55	67.568	Seriola_dumerili
ENSORLG00015004982	si:ch211-212k18.5	99	71.346	ENSSDUG00000006164	si:ch211-212k18.5	99	71.241	Seriola_dumerili
ENSORLG00015004982	si:ch211-212k18.5	99	73.235	ENSSLDG00000003393	si:ch211-212k18.5	99	72.720	Seriola_lalandi_dorsalis
ENSORLG00015004982	si:ch211-212k18.5	76	57.627	ENSSLDG00000001653	sall2	55	67.568	Seriola_lalandi_dorsalis
ENSORLG00015004982	si:ch211-212k18.5	95	70.588	ENSSPAG00000013435	si:ch211-212k18.5	97	70.390	Stegastes_partitus
ENSORLG00015004982	si:ch211-212k18.5	60	47.887	ENSSPAG00000023009	sall2	56	70.270	Stegastes_partitus
ENSORLG00015004982	si:ch211-212k18.5	73	72.654	ENSTRUG00000025082	si:ch211-212k18.5	98	72.402	Takifugu_rubripes
ENSORLG00015004982	si:ch211-212k18.5	63	43.660	ENSTRUG00000024556	sall2	62	71.429	Takifugu_rubripes
ENSORLG00015004982	si:ch211-212k18.5	99	66.915	ENSXCOG00000000762	si:ch211-212k18.5	100	66.449	Xiphophorus_couchianus
ENSORLG00015004982	si:ch211-212k18.5	59	52.830	ENSXMAG00000000902	sall2	59	45.149	Xiphophorus_maculatus
ENSORLG00015004982	si:ch211-212k18.5	99	68.430	ENSXMAG00000001461	si:ch211-212k18.5	100	67.837	Xiphophorus_maculatus