EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015005017 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 8753 bases
Position: chr7:22824656-22833408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015004219	zf-U11-48K	PF05253.12	4.5e-15	1	2
ENSORLP00015004219	zf-U11-48K	PF05253.12	4.5e-15	2	2
ENSORLP00015024441	zf-U11-48K	PF05253.12	8.5e-15	1	2
ENSORLP00015024441	zf-U11-48K	PF05253.12	8.5e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015007940	-	603	-	ENSORLP00015024441	200 (aa)	-	-
ENSORLT00015007955	-	1775	-	ENSORLP00015004219	158 (aa)	-	-

Gene Model

Click here to download ENSORLG00015005017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015005017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015005017	-	96	54.605	ENSORLG00015004961	zgc:56699	98	42.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015005017	-	71	50.877	ENSG00000170627	GTSF1	72	47.107	Homo_sapiens
ENSORLG00015005017	-	89	57.143	ENSAPOG00000022724	-	95	57.143	Acanthochromis_polyacanthus
ENSORLG00015005017	-	70	51.327	ENSAMEG00000000939	GTSF1	67	51.327	Ailuropoda_melanoleuca
ENSORLG00015005017	-	90	54.930	ENSAOCG00000022214	-	69	54.930	Amphiprion_ocellaris
ENSORLG00015005017	-	70	39.823	ENSAPLG00000004814	GTSF1	84	41.228	Anas_platyrhynchos
ENSORLG00015005017	-	72	41.739	ENSACAG00000029590	-	95	41.739	Anolis_carolinensis
ENSORLG00015005017	-	77	41.935	ENSACAG00000014260	-	73	41.935	Anolis_carolinensis
ENSORLG00015005017	-	74	49.580	ENSANAG00000024529	GTSF1	76	45.736	Aotus_nancymaae
ENSORLG00015005017	-	70	51.327	ENSBTAG00000018085	GTSF1	68	51.327	Bos_taurus
ENSORLG00015005017	-	71	50.877	ENSCJAG00000018968	-	72	47.107	Callithrix_jacchus
ENSORLG00015005017	-	70	49.550	ENSCJAG00000039915	-	63	48.276	Callithrix_jacchus
ENSORLG00015005017	-	70	51.327	ENSCAFG00000006465	-	68	51.327	Canis_familiaris
ENSORLG00015005017	-	70	51.327	ENSCAFG00020020373	-	65	51.327	Canis_lupus_dingo
ENSORLG00015005017	-	70	51.327	ENSCHIG00000012215	-	66	51.327	Capra_hircus
ENSORLG00015005017	-	70	52.212	ENSTSYG00000004679	-	68	52.212	Carlito_syrichta
ENSORLG00015005017	-	71	39.474	ENSTSYG00000035266	-	65	39.474	Carlito_syrichta
ENSORLG00015005017	-	70	51.327	ENSCPOG00000008743	GTSF1	76	44.961	Cavia_porcellus
ENSORLG00015005017	-	71	50.877	ENSCATG00000036328	GTSF1	72	47.107	Cercocebus_atys
ENSORLG00015005017	-	70	51.327	ENSCLAG00000012811	GTSF1	76	44.961	Chinchilla_lanigera
ENSORLG00015005017	-	70	51.327	ENSCSAG00000005394	GTSF1	72	51.327	Chlorocebus_sabaeus
ENSORLG00015005017	-	70	51.327	ENSCHOG00000001659	GTSF1	68	51.327	Choloepus_hoffmanni
ENSORLG00015005017	-	70	46.491	ENSCPBG00000005134	-	50	46.491	Chrysemys_picta_bellii
ENSORLG00015005017	-	89	36.806	ENSCPBG00000024905	-	79	36.806	Chrysemys_picta_bellii
ENSORLG00015005017	-	74	48.739	ENSCANG00000033118	GTSF1	72	47.107	Colobus_angolensis_palliatus
ENSORLG00015005017	-	70	49.558	ENSCANG00000031776	-	71	45.455	Colobus_angolensis_palliatus
ENSORLG00015005017	-	70	51.327	ENSCGRG00001013814	Gtsf1	76	44.961	Cricetulus_griseus_chok1gshd
ENSORLG00015005017	-	70	51.327	ENSCGRG00000007733	Gtsf1	76	44.961	Cricetulus_griseus_crigri
ENSORLG00015005017	-	70	51.327	ENSDNOG00000001438	-	67	51.327	Dasypus_novemcinctus
ENSORLG00015005017	-	70	50.442	ENSDORG00000003228	Gtsf1	76	44.961	Dipodomys_ordii
ENSORLG00015005017	-	70	50.893	ENSETEG00000009310	GTSF1	76	44.444	Echinops_telfairi
ENSORLG00015005017	-	70	50.442	ENSEASG00005010260	GTSF1	61	50.442	Equus_asinus_asinus
ENSORLG00015005017	-	71	50.000	ENSECAG00000013618	GTSF1	68	50.442	Equus_caballus
ENSORLG00015005017	-	70	51.327	ENSEEUG00000005185	GTSF1	68	51.327	Erinaceus_europaeus
ENSORLG00015005017	-	70	51.327	ENSFCAG00000010156	-	68	51.327	Felis_catus
ENSORLG00015005017	-	71	40.517	ENSFALG00000007613	-	91	40.517	Ficedula_albicollis
ENSORLG00015005017	-	70	51.327	ENSFDAG00000009383	GTSF1	76	44.186	Fukomys_damarensis
ENSORLG00015005017	-	70	43.103	ENSGALG00000001109	GTSF1	72	43.103	Gallus_gallus
ENSORLG00015005017	-	95	62.914	ENSGACG00000010783	-	98	54.494	Gasterosteus_aculeatus
ENSORLG00015005017	-	53	50.602	ENSGAGG00000024765	-	75	50.602	Gopherus_agassizii
ENSORLG00015005017	-	92	40.994	ENSGAGG00000011062	GTSF1	81	40.994	Gopherus_agassizii
ENSORLG00015005017	-	62	44.231	ENSGAGG00000016342	-	97	43.925	Gopherus_agassizii
ENSORLG00015005017	-	71	50.877	ENSGGOG00000016063	GTSF1	72	47.107	Gorilla_gorilla
ENSORLG00015005017	-	70	49.558	ENSHGLG00000002436	GTSF1	76	44.186	Heterocephalus_glaber_female
ENSORLG00015005017	-	70	49.558	ENSHGLG00100017301	GTSF1	76	44.186	Heterocephalus_glaber_male
ENSORLG00015005017	-	91	46.309	ENSIPUG00000002483	-	81	46.309	Ictalurus_punctatus
ENSORLG00015005017	-	70	51.327	ENSSTOG00000025170	GTSF1	76	44.961	Ictidomys_tridecemlineatus
ENSORLG00015005017	-	68	47.706	ENSJJAG00000017442	-	69	47.706	Jaculus_jaculus
ENSORLG00015005017	-	77	48.387	ENSJJAG00000003323	-	70	50.442	Jaculus_jaculus
ENSORLG00015005017	-	98	55.128	ENSKMAG00000006038	-	88	55.128	Kryptolebias_marmoratus
ENSORLG00015005017	-	72	52.137	ENSLACG00000008870	GTSF1	60	52.137	Latimeria_chalumnae
ENSORLG00015005017	-	70	51.327	ENSLAFG00000016318	GTSF1	68	51.327	Loxodonta_africana
ENSORLG00015005017	-	71	50.877	ENSMFAG00000041178	GTSF1	72	47.107	Macaca_fascicularis
ENSORLG00015005017	-	71	50.877	ENSMMUG00000003758	GTSF1	72	47.107	Macaca_mulatta
ENSORLG00015005017	-	71	50.877	ENSMNEG00000036779	GTSF1	72	47.107	Macaca_nemestrina
ENSORLG00015005017	-	73	50.000	ENSMLEG00000028375	GTSF1	70	50.000	Mandrillus_leucophaeus
ENSORLG00015005017	-	70	41.739	ENSMGAG00000000685	GTSF1	81	41.739	Meleagris_gallopavo
ENSORLG00015005017	-	71	37.168	ENSMAUG00000018746	Gtsf1	72	36.290	Mesocricetus_auratus
ENSORLG00015005017	-	70	52.212	ENSMICG00000008444	-	68	52.212	Microcebus_murinus
ENSORLG00015005017	-	70	51.327	ENSMOCG00000018889	Gtsf1	76	44.961	Microtus_ochrogaster
ENSORLG00015005017	-	70	50.442	ENSMODG00000019422	GTSF1	75	43.651	Monodelphis_domestica
ENSORLG00015005017	-	71	50.877	MGP_CAROLIEiJ_G0020379	Gtsf1	100	44.961	Mus_caroli
ENSORLG00015005017	-	71	50.877	ENSMUSG00000022487	Gtsf1	100	44.961	Mus_musculus
ENSORLG00015005017	-	71	50.877	MGP_PahariEiJ_G0020378	Gtsf1	100	44.961	Mus_pahari
ENSORLG00015005017	-	71	50.877	MGP_SPRETEiJ_G0021272	Gtsf1	100	44.961	Mus_spretus
ENSORLG00015005017	-	70	51.327	ENSMPUG00000005669	-	68	51.327	Mustela_putorius_furo
ENSORLG00015005017	-	70	51.327	ENSMPUG00000019323	-	68	51.327	Mustela_putorius_furo
ENSORLG00015005017	-	70	49.558	ENSMPUG00000019140	-	76	44.444	Mustela_putorius_furo
ENSORLG00015005017	-	71	48.246	ENSMLUG00000026557	-	76	44.961	Myotis_lucifugus
ENSORLG00015005017	-	71	50.000	ENSMLUG00000012961	-	72	47.107	Myotis_lucifugus
ENSORLG00015005017	-	70	51.327	ENSNGAG00000014213	Gtsf1	68	51.327	Nannospalax_galili
ENSORLG00015005017	-	71	50.000	ENSNLEG00000017635	GTSF1	72	47.107	Nomascus_leucogenys
ENSORLG00015005017	-	63	46.535	ENSMEUG00000016206	GTSF1	60	46.535	Notamacropus_eugenii
ENSORLG00015005017	-	70	51.327	ENSODEG00000014220	GTSF1	76	44.961	Octodon_degus
ENSORLG00015005017	-	75	46.341	ENSOANG00000011386	GTSF1	75	46.341	Ornithorhynchus_anatinus
ENSORLG00015005017	-	70	51.327	ENSOCUG00000024495	GTSF1	76	45.736	Oryctolagus_cuniculus
ENSORLG00015005017	-	70	51.327	ENSOGAG00000017227	GTSF1	66	51.327	Otolemur_garnettii
ENSORLG00015005017	-	70	51.327	ENSOARG00000016162	GTSF1	68	51.327	Ovis_aries
ENSORLG00015005017	-	71	50.877	ENSPPAG00000028506	GTSF1	72	47.107	Pan_paniscus
ENSORLG00015005017	-	71	47.321	ENSPPRG00000017612	-	67	43.802	Panthera_pardus
ENSORLG00015005017	-	70	51.327	ENSPPRG00000004344	-	68	51.327	Panthera_pardus
ENSORLG00015005017	-	70	51.327	ENSPTIG00000020415	-	68	51.327	Panthera_tigris_altaica
ENSORLG00015005017	-	71	48.214	ENSPTIG00000010868	-	67	44.628	Panthera_tigris_altaica
ENSORLG00015005017	-	71	50.877	ENSPTRG00000005041	GTSF1	72	47.107	Pan_troglodytes
ENSORLG00015005017	-	74	49.580	ENSPANG00000020579	GTSF1	70	49.580	Papio_anubis
ENSORLG00015005017	-	72	42.857	ENSPSIG00000009839	-	75	41.129	Pelodiscus_sinensis
ENSORLG00015005017	-	70	46.491	ENSPSIG00000009968	GTSF1	60	45.082	Pelodiscus_sinensis
ENSORLG00015005017	-	70	51.327	ENSPEMG00000009595	Gtsf1	76	44.961	Peromyscus_maniculatus_bairdii
ENSORLG00015005017	-	70	49.558	ENSPCIG00000006731	GTSF1	75	45.238	Phascolarctos_cinereus
ENSORLG00015005017	-	71	50.877	ENSPPYG00000004605	GTSF1	72	47.107	Pongo_abelii
ENSORLG00015005017	-	70	43.363	ENSPCOG00000015201	-	68	43.636	Propithecus_coquereli
ENSORLG00015005017	-	70	51.327	ENSPCOG00000016907	-	72	47.934	Propithecus_coquereli
ENSORLG00015005017	-	70	51.327	ENSPVAG00000000333	GTSF1	68	51.327	Pteropus_vampyrus
ENSORLG00015005017	-	89	45.638	ENSPNAG00000005737	-	81	45.638	Pygocentrus_nattereri
ENSORLG00015005017	-	70	51.327	ENSRNOG00000036831	Gtsf1	67	44.961	Rattus_norvegicus
ENSORLG00015005017	-	70	51.327	ENSRBIG00000043438	-	68	51.327	Rhinopithecus_bieti
ENSORLG00015005017	-	70	43.363	ENSRBIG00000039916	-	63	39.669	Rhinopithecus_bieti
ENSORLG00015005017	-	71	50.877	ENSRROG00000008137	GTSF1	72	47.107	Rhinopithecus_roxellana
ENSORLG00015005017	-	71	50.877	ENSSBOG00000029460	GTSF1	72	47.107	Saimiri_boliviensis_boliviensis
ENSORLG00015005017	-	70	50.442	ENSSHAG00000011633	GTSF1	75	43.651	Sarcophilus_harrisii
ENSORLG00015005017	-	70	52.212	ENSSARG00000004928	GTSF1	68	52.212	Sorex_araneus
ENSORLG00015005017	-	63	48.515	ENSSPUG00000010064	GTSF1	94	46.847	Sphenodon_punctatus
ENSORLG00015005017	-	70	50.442	ENSSSCG00000026333	GTSF1	68	50.442	Sus_scrofa
ENSORLG00015005017	-	71	40.000	ENSTGUG00000002008	-	90	40.000	Taeniopygia_guttata
ENSORLG00015005017	-	70	51.327	ENSTBEG00000006154	GTSF1	71	51.327	Tupaia_belangeri
ENSORLG00015005017	-	70	52.212	ENSTTRG00000004470	GTSF1	68	52.212	Tursiops_truncatus
ENSORLG00015005017	-	70	51.327	ENSUAMG00000021669	GTSF1	65	51.327	Ursus_americanus
ENSORLG00015005017	-	70	51.327	ENSUMAG00000011279	GTSF1	68	51.327	Ursus_maritimus
ENSORLG00015005017	-	70	52.212	ENSVPAG00000007016	GTSF1	68	52.212	Vicugna_pacos
ENSORLG00015005017	-	70	51.327	ENSVVUG00000023687	-	57	51.327	Vulpes_vulpes
ENSORLG00015005017	-	71	47.321	ENSXETG00000033546	gtsf1	57	45.736	Xenopus_tropicalis