EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015005306 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 11152 bases
Position: chr10:17643489-17654640
Accession: 101155609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015024638	zf-RNPHF	PF08080.12	1.1e-08	1	1
ENSORLP00015024638	RRM_1	PF00076.22	4.5e-32	1	3
ENSORLP00015024638	RRM_1	PF00076.22	4.5e-32	2	3
ENSORLP00015024638	RRM_1	PF00076.22	4.5e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015007431	-	5313	-	ENSORLP00015024638	413 (aa)	XP_023815065	UPI0002A4A634

Gene Model

Click here to download ENSORLG00015005306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015005306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015005306	hnrnph1	81	42.296	ENSORLG00015006520	grsf1	78	43.807
ENSORLG00015005306	hnrnph1	94	58.047	ENSORLG00015001985	hnrnph3	98	57.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015005306	hnrnph1	100	95.642	ENSAPOG00000016614	hnrnph1	100	95.642	Acanthochromis_polyacanthus
ENSORLG00015005306	hnrnph1	92	95.026	ENSACIG00000008964	hnrnph1	98	95.026	Amphilophus_citrinellus
ENSORLG00015005306	hnrnph1	100	96.126	ENSAOCG00000008372	hnrnph1	100	96.126	Amphiprion_ocellaris
ENSORLG00015005306	hnrnph1	100	95.884	ENSAPEG00000012980	hnrnph1	100	95.884	Amphiprion_percula
ENSORLG00015005306	hnrnph1	100	95.884	ENSATEG00000002792	hnrnph1	100	95.884	Anabas_testudineus
ENSORLG00015005306	hnrnph1	99	71.018	ENSACAG00000016323	-	91	76.019	Anolis_carolinensis
ENSORLG00015005306	hnrnph1	84	94.101	ENSACLG00000003313	hnrnph1	97	94.101	Astatotilapia_calliptera
ENSORLG00015005306	hnrnph1	99	80.193	ENSAMXG00000030703	hnrnph1l	84	80.918	Astyanax_mexicanus
ENSORLG00015005306	hnrnph1	100	81.579	ENSAMXG00000002483	hnrnph1	99	86.494	Astyanax_mexicanus
ENSORLG00015005306	hnrnph1	100	91.807	ENSCSEG00000015891	hnrnph1	100	93.494	Cynoglossus_semilaevis
ENSORLG00015005306	hnrnph1	100	93.947	ENSCVAG00000014097	hnrnph1	100	92.978	Cyprinodon_variegatus
ENSORLG00015005306	hnrnph1	95	86.076	ENSDARG00000005551	hnrnph1l	99	83.816	Danio_rerio
ENSORLG00015005306	hnrnph1	93	86.010	ENSDARG00000040881	hnrnph1	94	87.047	Danio_rerio
ENSORLG00015005306	hnrnph1	100	86.761	ENSELUG00000006715	hnrnph1	100	83.452	Esox_lucius
ENSORLG00015005306	hnrnph1	92	81.299	ENSELUG00000021437	-	99	85.751	Esox_lucius
ENSORLG00015005306	hnrnph1	100	92.494	ENSFHEG00000008474	hnrnph1	100	91.041	Fundulus_heteroclitus
ENSORLG00015005306	hnrnph1	96	89.822	ENSGMOG00000006782	hnrnph1	97	90.585	Gadus_morhua
ENSORLG00015005306	hnrnph1	100	95.884	ENSGAFG00000006280	hnrnph1	100	95.884	Gambusia_affinis
ENSORLG00015005306	hnrnph1	100	89.588	ENSGACG00000018352	hnrnph1	99	89.713	Gasterosteus_aculeatus
ENSORLG00015005306	hnrnph1	96	94.101	ENSHBUG00000010547	hnrnph1	98	94.101	Haplochromis_burtoni
ENSORLG00015005306	hnrnph1	100	85.748	ENSHCOG00000004513	hnrnph1	100	87.648	Hippocampus_comes
ENSORLG00015005306	hnrnph1	95	81.266	ENSIPUG00000024047	hnrnph1l	90	83.377	Ictalurus_punctatus
ENSORLG00015005306	hnrnph1	100	80.861	ENSIPUG00000018262	hnrnph1	100	83.254	Ictalurus_punctatus
ENSORLG00015005306	hnrnph1	100	94.915	ENSKMAG00000018802	hnrnph1	100	93.947	Kryptolebias_marmoratus
ENSORLG00015005306	hnrnph1	100	94.915	ENSLBEG00000027811	hnrnph1	100	94.915	Labrus_bergylta
ENSORLG00015005306	hnrnph1	96	82.878	ENSLOCG00000012510	hnrnph1	91	81.886	Lepisosteus_oculatus
ENSORLG00015005306	hnrnph1	99	52.887	ENSMMUG00000017392	-	83	56.065	Macaca_mulatta
ENSORLG00015005306	hnrnph1	99	52.656	ENSMNEG00000030544	-	83	56.065	Macaca_nemestrina
ENSORLG00015005306	hnrnph1	93	91.129	ENSMAMG00000011478	hnrnph1	99	91.129	Mastacembelus_armatus
ENSORLG00015005306	hnrnph1	100	95.884	ENSMZEG00005009791	hnrnph1	100	95.884	Maylandia_zebra
ENSORLG00015005306	hnrnph1	92	93.194	ENSMMOG00000009064	hnrnph1	98	92.932	Mola_mola
ENSORLG00015005306	hnrnph1	75	51.343	ENSMODG00000002200	-	99	51.497	Monodelphis_domestica
ENSORLG00015005306	hnrnph1	93	93.611	ENSMALG00000003999	hnrnph1	99	93.611	Monopterus_albus
ENSORLG00015005306	hnrnph1	96	94.101	ENSNBRG00000015406	hnrnph1	98	94.101	Neolamprologus_brichardi
ENSORLG00015005306	hnrnph1	100	95.884	ENSONIG00000017754	hnrnph1	100	95.884	Oreochromis_niloticus
ENSORLG00015005306	hnrnph1	100	100.000	ENSORLG00000006932	hnrnph1	100	100.000	Oryzias_latipes
ENSORLG00015005306	hnrnph1	100	99.758	ENSORLG00020007881	hnrnph1	100	99.758	Oryzias_latipes_hni
ENSORLG00015005306	hnrnph1	100	97.821	ENSOMEG00000009827	hnrnph1	100	97.821	Oryzias_melastigma
ENSORLG00015005306	hnrnph1	93	82.090	ENSPKIG00000009532	-	93	81.343	Paramormyrops_kingsleyae
ENSORLG00015005306	hnrnph1	100	85.646	ENSPKIG00000018203	hnrnph1l	100	83.654	Paramormyrops_kingsleyae
ENSORLG00015005306	hnrnph1	100	92.252	ENSPMGG00000012151	hnrnph1	100	92.252	Periophthalmus_magnuspinnatus
ENSORLG00015005306	hnrnph1	100	95.884	ENSPFOG00000004097	hnrnph1	100	95.884	Poecilia_formosa
ENSORLG00015005306	hnrnph1	100	95.884	ENSPLAG00000011771	hnrnph1	100	95.884	Poecilia_latipinna
ENSORLG00015005306	hnrnph1	100	96.126	ENSPMEG00000019446	hnrnph1	100	96.126	Poecilia_mexicana
ENSORLG00015005306	hnrnph1	100	95.884	ENSPREG00000005780	hnrnph1	100	95.884	Poecilia_reticulata
ENSORLG00015005306	hnrnph1	100	95.884	ENSPNYG00000000204	hnrnph1	100	95.884	Pundamilia_nyererei
ENSORLG00015005306	hnrnph1	99	82.169	ENSPNAG00000002784	hnrnph1l	98	82.633	Pygocentrus_nattereri
ENSORLG00015005306	hnrnph1	100	81.579	ENSPNAG00000000439	hnrnph1	100	83.732	Pygocentrus_nattereri
ENSORLG00015005306	hnrnph1	98	87.715	ENSSFOG00015022796	hnrnph1l	100	86.091	Scleropages_formosus
ENSORLG00015005306	hnrnph1	97	84.901	ENSSFOG00015016055	-	94	86.822	Scleropages_formosus
ENSORLG00015005306	hnrnph1	95	95.276	ENSSMAG00000007820	hnrnph1	96	95.276	Scophthalmus_maximus
ENSORLG00015005306	hnrnph1	100	96.126	ENSSDUG00000008785	hnrnph1	100	96.126	Seriola_dumerili
ENSORLG00015005306	hnrnph1	100	96.126	ENSSLDG00000010685	hnrnph1	100	96.126	Seriola_lalandi_dorsalis
ENSORLG00015005306	hnrnph1	100	95.400	ENSSPAG00000009921	hnrnph1	100	95.400	Stegastes_partitus
ENSORLG00015005306	hnrnph1	100	93.705	ENSTRUG00000020069	hnrnph1	100	93.220	Takifugu_rubripes
ENSORLG00015005306	hnrnph1	99	73.288	ENSXETG00000018321	hnrnph1	85	79.357	Xenopus_tropicalis
ENSORLG00015005306	hnrnph1	93	94.118	ENSXCOG00000009133	hnrnph1	97	94.118	Xiphophorus_couchianus
ENSORLG00015005306	hnrnph1	92	95.812	ENSXMAG00000021332	hnrnph1	99	95.812	Xiphophorus_maculatus