EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015005509 (Gene tree)
Gene ID
-
Gene Symbol
rbms3
Alias
-
Full Name
RNA binding motif%2C single stranded interacting protein
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Minus strand
Length
134372 bases
Position
chr16:13709545-13843916
Accession
ZDB-GENE-060929-244
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015024732RRM_1PF00076.227.9e-3312
ENSORLP00015024732RRM_1PF00076.227.9e-3322
ENSORLP00015004688RRM_1PF00076.223.3e-3212
ENSORLP00015004688RRM_1PF00076.223.3e-3222
ENSORLP00015024748RRM_1PF00076.223.7e-3212
ENSORLP00015024748RRM_1PF00076.223.7e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015007186-1215-ENSORLP00015004688404 (aa)--
ENSORLT00015007156-1266-ENSORLP00015024748421 (aa)--
ENSORLT00015007198-1393-ENSORLP00015024732245 (aa)--
Gene Model
Click here to download ENSORLG00015005509's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015005509's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015005509rbms36631.683ENSORLG00015017018pabpc1l7131.683
ENSORLG00015005509rbms36438.158ENSORLG00015014818celf3b8038.889
ENSORLG00015005509rbms37868.769ENSORLG00015018208RBMS18865.054
ENSORLG00015005509rbms37139.474ENSORLG00015019715si:dkey-205h23.27639.474
ENSORLG00015005509rbms35638.202ENSORLG00015006221-5340.789
ENSORLG00015005509rbms38769.482ENSORLG00015012519rbms2a9067.760
ENSORLG00015005509rbms37640.789ENSORLG00015004115celf47740.789
ENSORLG00015005509rbms39981.948ENSORLG00015015719-9981.948
ENSORLG00015005509rbms36336.667ENSORLG00015016801elavl1a7035.484
ENSORLG00015005509rbms39065.535ENSORLG00015022556rbms2b8967.120
ENSORLG00015005509rbms35936.667ENSORLG00015000662elavl37236.667
ENSORLG00015005509rbms36337.654ENSORLG00015013661ELAVL26337.430
ENSORLG00015005509rbms37336.667ENSORLG00015008332-5335.567
ENSORLG00015005509rbms35841.558ENSORLG00015008084-5042.105
ENSORLG00015005509rbms36038.333ENSORLG00015010143elavl46037.097
ENSORLG00015005509rbms36533.010ENSORLG00015015042pabpc46033.010
ENSORLG00015005509rbms36476.923ENSORLG00015016556rbms1a8462.752
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015005509rbms310080.851ENSG00000144642RBMS310086.364Homo_sapiens
ENSORLG00015005509rbms310084.498ENSAPOG00000007266rbms310084.279Acanthochromis_polyacanthus
ENSORLG00015005509rbms39981.710ENSAPOG00000003432-9981.710Acanthochromis_polyacanthus
ENSORLG00015005509rbms36874.754ENSAMEG00000005947RBMS310074.754Ailuropoda_melanoleuca
ENSORLG00015005509rbms37287.086ENSACIG00000006987-8187.333Amphilophus_citrinellus
ENSORLG00015005509rbms38782.337ENSACIG00000021113RBMS39683.198Amphilophus_citrinellus
ENSORLG00015005509rbms39975.682ENSAOCG00000024104-9975.909Amphiprion_ocellaris
ENSORLG00015005509rbms310093.677ENSAOCG00000021274rbms310091.335Amphiprion_ocellaris
ENSORLG00015005509rbms39976.699ENSAPEG00000009481-9976.699Amphiprion_percula
ENSORLG00015005509rbms38294.587ENSAPEG00000016299rbms38696.636Amphiprion_percula
ENSORLG00015005509rbms39981.710ENSATEG00000008433-9981.710Anabas_testudineus
ENSORLG00015005509rbms310092.471ENSATEG00000024295rbms310090.824Anabas_testudineus
ENSORLG00015005509rbms39978.621ENSAPLG00000012270RBMS310079.080Anas_platyrhynchos
ENSORLG00015005509rbms310081.324ENSACAG00000028664RBMS39981.797Anolis_carolinensis
ENSORLG00015005509rbms310078.440ENSANAG00000021899RBMS310078.440Aotus_nancymaae
ENSORLG00015005509rbms38688.152ENSACLG00000008976-9474.775Astatotilapia_calliptera
ENSORLG00015005509rbms310092.689ENSACLG00000018506rbms310092.217Astatotilapia_calliptera
ENSORLG00015005509rbms310080.425ENSAMXG00000020388rbms310083.019Astyanax_mexicanus
ENSORLG00015005509rbms38484.058ENSAMXG00000043770-10080.228Astyanax_mexicanus
ENSORLG00015005509rbms310081.324ENSBTAG00000044062RBMS310081.324Bos_taurus
ENSORLG00015005509rbms310078.440ENSCJAG00000004312RBMS310078.440Callithrix_jacchus
ENSORLG00015005509rbms310077.854ENSCAFG00000005464RBMS39977.854Canis_familiaris
ENSORLG00015005509rbms310077.854ENSCAFG00020024980RBMS310077.854Canis_lupus_dingo
ENSORLG00015005509rbms310080.851ENSCHIG00000009144RBMS39980.851Capra_hircus
ENSORLG00015005509rbms37677.778ENSTSYG00000002615RBMS310077.778Carlito_syrichta
ENSORLG00015005509rbms38779.235ENSCAPG00000017783RBMS39379.235Cavia_aperea
ENSORLG00015005509rbms310078.960ENSCPOG00000006457RBMS39980.851Cavia_porcellus
ENSORLG00015005509rbms310078.440ENSCCAG00000008671RBMS310078.440Cebus_capucinus
ENSORLG00015005509rbms310078.211ENSCATG00000013222RBMS310078.211Cercocebus_atys
ENSORLG00015005509rbms310081.087ENSCLAG00000005866RBMS39981.087Chinchilla_lanigera
ENSORLG00015005509rbms36477.656ENSCSAG00000009655RBMS39977.656Chlorocebus_sabaeus
ENSORLG00015005509rbms38684.000ENSCHOG00000000758RBMS38178.310Choloepus_hoffmanni
ENSORLG00015005509rbms310081.324ENSCPBG00000022678RBMS39981.797Chrysemys_picta_bellii
ENSORLG00015005509rbms310078.440ENSCANG00000032137RBMS310078.440Colobus_angolensis_palliatus
ENSORLG00015005509rbms310075.414ENSCGRG00001007243Rbms39978.960Cricetulus_griseus_chok1gshd
ENSORLG00015005509rbms310075.414ENSCGRG00000004599Rbms39978.960Cricetulus_griseus_crigri
ENSORLG00015005509rbms310081.604ENSCSEG00000014677-9487.903Cynoglossus_semilaevis
ENSORLG00015005509rbms310091.080ENSCSEG00000010011RBMS310089.202Cynoglossus_semilaevis
ENSORLG00015005509rbms39979.335ENSCVAG00000022814-9583.060Cyprinodon_variegatus
ENSORLG00015005509rbms310092.891ENSCVAG00000022354rbms310092.891Cyprinodon_variegatus
ENSORLG00015005509rbms310081.991ENSDARG00000044574rbms39097.674Danio_rerio
ENSORLG00015005509rbms310080.142ENSDNOG00000016645RBMS310080.049Dasypus_novemcinctus
ENSORLG00015005509rbms310080.378ENSDORG00000007220Rbms39980.378Dipodomys_ordii
ENSORLG00015005509rbms36293.750ENSETEG00000009485-8164.689Echinops_telfairi
ENSORLG00015005509rbms36472.611ENSEBUG00000005830rbms38356.202Eptatretus_burgeri
ENSORLG00015005509rbms310080.615ENSEASG00005006152RBMS39980.615Equus_asinus_asinus
ENSORLG00015005509rbms310080.615ENSECAG00000017871RBMS39980.615Equus_caballus
ENSORLG00015005509rbms39072.152ENSEEUG00000014337RBMS310072.152Erinaceus_europaeus
ENSORLG00015005509rbms38687.678ENSELUG00000006905-9887.500Esox_lucius
ENSORLG00015005509rbms310076.977ENSELUG00000002862rbms39481.843Esox_lucius
ENSORLG00015005509rbms310080.378ENSFCAG00000002130RBMS39980.378Felis_catus
ENSORLG00015005509rbms310081.324ENSFALG00000009165RBMS39981.797Ficedula_albicollis
ENSORLG00015005509rbms310080.615ENSFDAG00000008278RBMS39980.615Fukomys_damarensis
ENSORLG00015005509rbms35479.699ENSFHEG00000016746-9377.444Fundulus_heteroclitus
ENSORLG00015005509rbms39778.049ENSFHEG00000004787RBMS39584.011Fundulus_heteroclitus
ENSORLG00015005509rbms38777.551ENSGMOG00000002600-9377.949Gadus_morhua
ENSORLG00015005509rbms310081.324ENSGALG00000011439RBMS39981.797Gallus_gallus
ENSORLG00015005509rbms39981.473ENSGAFG00000003329-9981.473Gambusia_affinis
ENSORLG00015005509rbms310094.313ENSGAFG00000000168rbms310094.313Gambusia_affinis
ENSORLG00015005509rbms36578.467ENSGAGG00000004039RBMS310078.467Gopherus_agassizii
ENSORLG00015005509rbms310078.440ENSGGOG00000007228RBMS310078.440Gorilla_gorilla
ENSORLG00015005509rbms310077.778ENSHBUG00000019785-9677.778Haplochromis_burtoni
ENSORLG00015005509rbms38793.953ENSHBUG00000021196rbms39491.822Haplochromis_burtoni
ENSORLG00015005509rbms310080.615ENSHGLG00000002170RBMS39980.615Heterocephalus_glaber_female
ENSORLG00015005509rbms310080.615ENSHGLG00100014278RBMS39980.615Heterocephalus_glaber_male
ENSORLG00015005509rbms39980.806ENSHCOG00000007894-9980.806Hippocampus_comes
ENSORLG00015005509rbms310081.604ENSIPUG00000017680rbms310084.198Ictalurus_punctatus
ENSORLG00015005509rbms310080.851ENSSTOG00000006324RBMS39980.851Ictidomys_tridecemlineatus
ENSORLG00015005509rbms310077.305ENSJJAG00000014708Rbms39977.305Jaculus_jaculus
ENSORLG00015005509rbms310092.774ENSKMAG00000020500rbms310090.909Kryptolebias_marmoratus
ENSORLG00015005509rbms39981.473ENSKMAG00000012586-9981.473Kryptolebias_marmoratus
ENSORLG00015005509rbms36083.650ENSLBEG00000006677rbms39783.650Labrus_bergylta
ENSORLG00015005509rbms39980.714ENSLBEG00000027388-9981.190Labrus_bergylta
ENSORLG00015005509rbms310083.452ENSLACG00000010581RBMS310083.452Latimeria_chalumnae
ENSORLG00015005509rbms36981.633ENSLOCG00000002328rbms310081.633Lepisosteus_oculatus
ENSORLG00015005509rbms310077.854ENSLAFG00000000354RBMS310077.854Loxodonta_africana
ENSORLG00015005509rbms310080.851ENSMFAG00000033300RBMS39980.851Macaca_fascicularis
ENSORLG00015005509rbms310080.851ENSMMUG00000004404RBMS39980.851Macaca_mulatta
ENSORLG00015005509rbms310078.440ENSMNEG00000035839RBMS310078.440Macaca_nemestrina
ENSORLG00015005509rbms310078.211ENSMLEG00000029464RBMS310078.211Mandrillus_leucophaeus
ENSORLG00015005509rbms39979.665ENSMAMG00000002176-8384.514Mastacembelus_armatus
ENSORLG00015005509rbms310092.488ENSMAMG00000024043rbms310090.376Mastacembelus_armatus
ENSORLG00015005509rbms310078.851ENSMZEG00005026469-9679.080Maylandia_zebra
ENSORLG00015005509rbms310092.689ENSMZEG00005006308rbms310092.217Maylandia_zebra
ENSORLG00015005509rbms310075.414ENSMAUG00000016436Rbms39978.960Mesocricetus_auratus
ENSORLG00015005509rbms310078.440ENSMICG00000049249RBMS310078.440Microcebus_murinus
ENSORLG00015005509rbms310077.305ENSMOCG00000006997Rbms39978.487Microtus_ochrogaster
ENSORLG00015005509rbms38293.983ENSMMOG00000008471RBMS38996.024Mola_mola
ENSORLG00015005509rbms39981.384ENSMMOG00000015071-9981.384Mola_mola
ENSORLG00015005509rbms310072.052ENSMODG00000015125RBMS39973.942Monodelphis_domestica
ENSORLG00015005509rbms39982.185ENSMALG00000009155-9982.185Monopterus_albus
ENSORLG00015005509rbms310090.588ENSMALG00000019536RBMS310090.824Monopterus_albus
ENSORLG00015005509rbms310077.305MGP_CAROLIEiJ_G0032783Rbms39978.487Mus_caroli
ENSORLG00015005509rbms310075.414ENSMUSG00000039607Rbms39978.960Mus_musculus
ENSORLG00015005509rbms310075.236MGP_PahariEiJ_G0015650Rbms39978.774Mus_pahari
ENSORLG00015005509rbms310075.414MGP_SPRETEiJ_G0033930Rbms39978.960Mus_spretus
ENSORLG00015005509rbms310077.854ENSMPUG00000011956RBMS310077.854Mustela_putorius_furo
ENSORLG00015005509rbms310080.851ENSMLUG00000000659RBMS310080.851Myotis_lucifugus
ENSORLG00015005509rbms310077.541ENSNGAG00000014039Rbms39979.905Nannospalax_galili
ENSORLG00015005509rbms39981.473ENSNBRG00000018065-9981.473Neolamprologus_brichardi
ENSORLG00015005509rbms310078.440ENSNLEG00000004129RBMS310078.440Nomascus_leucogenys
ENSORLG00015005509rbms39971.526ENSMEUG00000004772RBMS310072.437Notamacropus_eugenii
ENSORLG00015005509rbms39978.032ENSOPRG00000006808RBMS38578.032Ochotona_princeps
ENSORLG00015005509rbms310080.615ENSODEG00000003651RBMS39980.615Octodon_degus
ENSORLG00015005509rbms310091.358ENSONIG00000007172rbms310091.605Oreochromis_niloticus
ENSORLG00015005509rbms310079.271ENSOANG00000010529RBMS39979.271Ornithorhynchus_anatinus
ENSORLG00015005509rbms310077.397ENSOCUG00000004840RBMS39977.397Oryctolagus_cuniculus
ENSORLG00015005509rbms39981.948ENSORLG00000002306-9981.948Oryzias_latipes
ENSORLG00015005509rbms310099.287ENSORLG00000005370RBMS310099.287Oryzias_latipes
ENSORLG00015005509rbms310099.287ENSORLG00020022674RBMS310099.287Oryzias_latipes_hni
ENSORLG00015005509rbms39981.948ENSORLG00020008496-9981.948Oryzias_latipes_hni
ENSORLG00015005509rbms310098.575ENSOMEG00000014805RBMS310099.225Oryzias_melastigma
ENSORLG00015005509rbms39181.654ENSOMEG00000007677-9583.607Oryzias_melastigma
ENSORLG00015005509rbms310077.397ENSOARG00000014684RBMS39977.397Ovis_aries
ENSORLG00015005509rbms310078.440ENSPPAG00000036519RBMS310078.440Pan_paniscus
ENSORLG00015005509rbms310077.752ENSPPRG00000002761RBMS310077.752Panthera_pardus
ENSORLG00015005509rbms310080.142ENSPTIG00000011568RBMS310080.142Panthera_tigris_altaica
ENSORLG00015005509rbms310080.851ENSPTRG00000014709RBMS39980.851Pan_troglodytes
ENSORLG00015005509rbms310078.211ENSPANG00000010234RBMS310078.211Papio_anubis
ENSORLG00015005509rbms36593.711ENSPKIG00000016025-7387.204Paramormyrops_kingsleyae
ENSORLG00015005509rbms38786.385ENSPKIG00000007989-10084.791Paramormyrops_kingsleyae
ENSORLG00015005509rbms310080.851ENSPSIG00000005269RBMS39981.324Pelodiscus_sinensis
ENSORLG00015005509rbms39181.865ENSPMGG00000021683-9583.836Periophthalmus_magnuspinnatus
ENSORLG00015005509rbms38293.084ENSPMGG00000021544rbms38594.190Periophthalmus_magnuspinnatus
ENSORLG00015005509rbms39972.684ENSPEMG00000001117Rbms310076.247Peromyscus_maniculatus_bairdii
ENSORLG00015005509rbms38786.916ENSPCIG00000006106RBMS38985.514Phascolarctos_cinereus
ENSORLG00015005509rbms310094.550ENSPFOG00000017887rbms310094.550Poecilia_formosa
ENSORLG00015005509rbms37693.458ENSPLAG00000016866-8393.458Poecilia_latipinna
ENSORLG00015005509rbms35479.699ENSPLAG00000005161-7779.699Poecilia_latipinna
ENSORLG00015005509rbms39981.235ENSPMEG00000002993-9981.235Poecilia_mexicana
ENSORLG00015005509rbms39993.079ENSPREG00000011880rbms39992.124Poecilia_reticulata
ENSORLG00015005509rbms38688.152ENSPREG00000018221-9784.942Poecilia_reticulata
ENSORLG00015005509rbms310065.525ENSPPYG00000014050RBMS38265.525Pongo_abelii
ENSORLG00015005509rbms310058.770ENSPCAG00000006307RBMS39958.770Procavia_capensis
ENSORLG00015005509rbms310078.670ENSPCOG00000017136RBMS310078.670Propithecus_coquereli
ENSORLG00015005509rbms310069.863ENSPVAG00000014037RBMS38378.297Pteropus_vampyrus
ENSORLG00015005509rbms39981.473ENSPNYG00000012624-9981.473Pundamilia_nyererei
ENSORLG00015005509rbms310092.453ENSPNYG00000010546rbms310091.981Pundamilia_nyererei
ENSORLG00015005509rbms37882.199ENSPNAG00000026763-7190.062Pygocentrus_nattereri
ENSORLG00015005509rbms310080.425ENSPNAG00000001800rbms310083.019Pygocentrus_nattereri
ENSORLG00015005509rbms310075.414ENSRNOG00000025881Rbms310078.960Rattus_norvegicus
ENSORLG00015005509rbms310078.670ENSRBIG00000035863RBMS310078.670Rhinopithecus_bieti
ENSORLG00015005509rbms38780.840ENSRROG00000027512RBMS39380.840Rhinopithecus_roxellana
ENSORLG00015005509rbms310078.440ENSSBOG00000020232RBMS310078.440Saimiri_boliviensis_boliviensis
ENSORLG00015005509rbms38777.717ENSSHAG00000002411RBMS39478.804Sarcophilus_harrisii
ENSORLG00015005509rbms39982.297ENSSFOG00015008578rbms39982.297Scleropages_formosus
ENSORLG00015005509rbms38788.263ENSSMAG00000020065-9383.990Scophthalmus_maximus
ENSORLG00015005509rbms310088.056ENSSMAG00000004997rbms310091.304Scophthalmus_maximus
ENSORLG00015005509rbms39981.710ENSSDUG00000019287-9981.710Seriola_dumerili
ENSORLG00015005509rbms310092.723ENSSDUG00000013656RBMS310091.080Seriola_dumerili
ENSORLG00015005509rbms310092.308ENSSLDG00000020276RBMS310090.443Seriola_lalandi_dorsalis
ENSORLG00015005509rbms39981.710ENSSLDG00000013224-9981.710Seriola_lalandi_dorsalis
ENSORLG00015005509rbms36496.154ENSSARG00000000695RBMS39268.235Sorex_araneus
ENSORLG00015005509rbms37076.667ENSSPUG00000017197RBMS39876.667Sphenodon_punctatus
ENSORLG00015005509rbms310093.208ENSSPAG00000020693rbms310091.101Stegastes_partitus
ENSORLG00015005509rbms39977.541ENSSPAG00000003983-9977.305Stegastes_partitus
ENSORLG00015005509rbms310080.615ENSSSCG00000036381RBMS39980.615Sus_scrofa
ENSORLG00015005509rbms37677.910ENSTGUG00000003572RBMS310077.910Taeniopygia_guttata
ENSORLG00015005509rbms310090.376ENSTRUG00000021719RBMS310088.498Takifugu_rubripes
ENSORLG00015005509rbms39972.104ENSTRUG00000007482-9972.577Takifugu_rubripes
ENSORLG00015005509rbms36496.154ENSTBEG00000005362RBMS39281.818Tupaia_belangeri
ENSORLG00015005509rbms39977.346ENSTTRG00000006202RBMS310077.346Tursiops_truncatus
ENSORLG00015005509rbms310077.854ENSUMAG00000000263RBMS39977.854Ursus_maritimus
ENSORLG00015005509rbms38769.895ENSVPAG00000003842RBMS39269.895Vicugna_pacos
ENSORLG00015005509rbms38779.896ENSVVUG00000004660RBMS39092.344Vulpes_vulpes
ENSORLG00015005509rbms36973.548ENSXETG00000032055RBMS39973.548Xenopus_tropicalis
ENSORLG00015005509rbms39167.176ENSXCOG00000019600-9568.280Xiphophorus_couchianus
ENSORLG00015005509rbms310091.962ENSXMAG00000021783rbms310092.908Xiphophorus_maculatus
ENSORLG00015005509rbms39981.473ENSXMAG00000014382-9981.473Xiphophorus_maculatus

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