EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015005537 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: si:ch1073-335m2.2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 24620 bases
Position: chr5:1645914-1670533
Accession: ZDB-GENE-081104-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015024768	RRM_5	PF13893.6	1.7e-08	1	2
ENSORLP00015024768	RRM_5	PF13893.6	1.7e-08	2	2
ENSORLP00015004753	RRM_5	PF13893.6	1.7e-08	1	2
ENSORLP00015004753	RRM_5	PF13893.6	1.7e-08	2	2
ENSORLP00015024768	RRM_1	PF00076.22	2.1e-43	1	3
ENSORLP00015024768	RRM_1	PF00076.22	2.1e-43	2	3
ENSORLP00015024768	RRM_1	PF00076.22	2.1e-43	3	3
ENSORLP00015004753	RRM_1	PF00076.22	2.3e-43	1	3
ENSORLP00015004753	RRM_1	PF00076.22	2.3e-43	2	3
ENSORLP00015004753	RRM_1	PF00076.22	2.3e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015007075	-	12027	-	ENSORLP00015004753	3171 (aa)	-	-
ENSORLT00015007113	-	9336	-	ENSORLP00015024768	3111 (aa)	-	-

Gene Model

Click here to download ENSORLG00015005537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015005537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015005537	si:ch1073-335m2.2	77	64.135	ENSG00000065526	SPEN	85	85.259	Homo_sapiens
ENSORLG00015005537	si:ch1073-335m2.2	100	73.490	ENSAPOG00000011411	si:ch1073-335m2.2	100	73.637	Acanthochromis_polyacanthus
ENSORLG00015005537	si:ch1073-335m2.2	99	78.378	ENSAPOG00000009853	-	95	82.716	Acanthochromis_polyacanthus
ENSORLG00015005537	si:ch1073-335m2.2	82	81.988	ENSAMEG00000011817	SPEN	70	81.988	Ailuropoda_melanoleuca
ENSORLG00015005537	si:ch1073-335m2.2	99	78.378	ENSAOCG00000014505	-	95	82.716	Amphiprion_ocellaris
ENSORLG00015005537	si:ch1073-335m2.2	89	70.895	ENSAOCG00000008077	si:ch1073-335m2.2	99	70.649	Amphiprion_ocellaris
ENSORLG00015005537	si:ch1073-335m2.2	99	78.378	ENSAPEG00000010288	-	95	82.716	Amphiprion_percula
ENSORLG00015005537	si:ch1073-335m2.2	100	72.781	ENSAPEG00000013515	si:ch1073-335m2.2	100	72.898	Amphiprion_percula
ENSORLG00015005537	si:ch1073-335m2.2	99	79.651	ENSATEG00000005627	-	95	83.951	Anabas_testudineus
ENSORLG00015005537	si:ch1073-335m2.2	100	70.482	ENSATEG00000007674	si:ch1073-335m2.2	100	70.687	Anabas_testudineus
ENSORLG00015005537	si:ch1073-335m2.2	80	56.098	ENSAPLG00000012618	SPEN	92	81.871	Anas_platyrhynchos
ENSORLG00015005537	si:ch1073-335m2.2	62	81.503	ENSACAG00000013761	SPEN	66	81.503	Anolis_carolinensis
ENSORLG00015005537	si:ch1073-335m2.2	86	63.866	ENSANAG00000034428	SPEN	67	81.366	Aotus_nancymaae
ENSORLG00015005537	si:ch1073-335m2.2	99	82.099	ENSACLG00000016922	-	52	82.099	Astatotilapia_calliptera
ENSORLG00015005537	si:ch1073-335m2.2	100	69.446	ENSACLG00000021433	si:ch1073-335m2.2	100	69.665	Astatotilapia_calliptera
ENSORLG00015005537	si:ch1073-335m2.2	99	81.366	ENSAMXG00000012485	spen	90	77.005	Astyanax_mexicanus
ENSORLG00015005537	si:ch1073-335m2.2	51	66.516	ENSBTAG00000018729	SPEN	71	81.988	Bos_taurus
ENSORLG00015005537	si:ch1073-335m2.2	87	64.286	ENSCJAG00000008527	SPEN	67	78.824	Callithrix_jacchus
ENSORLG00015005537	si:ch1073-335m2.2	67	58.055	ENSCAFG00000016132	-	63	66.317	Canis_familiaris
ENSORLG00015005537	si:ch1073-335m2.2	86	64.854	ENSCHIG00000025070	SPEN	71	74.595	Capra_hircus
ENSORLG00015005537	si:ch1073-335m2.2	78	67.290	ENSCAPG00000013803	SPEN	69	81.065	Cavia_aperea
ENSORLG00015005537	si:ch1073-335m2.2	78	67.290	ENSCPOG00000014036	SPEN	69	81.065	Cavia_porcellus
ENSORLG00015005537	si:ch1073-335m2.2	77	64.286	ENSCCAG00000020258	SPEN	66	81.287	Cebus_capucinus
ENSORLG00015005537	si:ch1073-335m2.2	81	81.481	ENSCATG00000015079	SPEN	67	77.703	Cercocebus_atys
ENSORLG00015005537	si:ch1073-335m2.2	79	65.919	ENSCLAG00000002018	SPEN	71	81.065	Chinchilla_lanigera
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSCSAG00000000841	SPEN	70	66.316	Chlorocebus_sabaeus
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSCANG00000034547	SPEN	67	81.287	Colobus_angolensis_palliatus
ENSORLG00015005537	si:ch1073-335m2.2	86	81.176	ENSCGRG00001007725	Spen	70	81.875	Cricetulus_griseus_chok1gshd
ENSORLG00015005537	si:ch1073-335m2.2	75	81.176	ENSCGRG00000010581	Spen	70	81.875	Cricetulus_griseus_crigri
ENSORLG00015005537	si:ch1073-335m2.2	54	67.290	ENSCSEG00000003915	-	86	82.099	Cynoglossus_semilaevis
ENSORLG00015005537	si:ch1073-335m2.2	100	69.826	ENSCVAG00000009075	si:ch1073-335m2.2	100	69.764	Cyprinodon_variegatus
ENSORLG00015005537	si:ch1073-335m2.2	100	53.134	ENSDARG00000074332	si:ch1073-335m2.2	100	53.236	Danio_rerio
ENSORLG00015005537	si:ch1073-335m2.2	95	80.247	ENSDARG00000074245	spen	100	81.481	Danio_rerio
ENSORLG00015005537	si:ch1073-335m2.2	87	57.455	ENSDNOG00000041948	SPEN	70	66.512	Dasypus_novemcinctus
ENSORLG00015005537	si:ch1073-335m2.2	85	66.516	ENSDORG00000023909	Spen	75	81.988	Dipodomys_ordii
ENSORLG00015005537	si:ch1073-335m2.2	59	83.721	ENSEEUG00000010255	SPEN	51	83.721	Erinaceus_europaeus
ENSORLG00015005537	si:ch1073-335m2.2	97	63.725	ENSELUG00000007726	si:ch1073-335m2.2	100	59.208	Esox_lucius
ENSORLG00015005537	si:ch1073-335m2.2	62	55.944	ENSFALG00000003551	SPEN	64	81.871	Ficedula_albicollis
ENSORLG00015005537	si:ch1073-335m2.2	86	63.180	ENSFDAG00000010212	SPEN	79	81.065	Fukomys_damarensis
ENSORLG00015005537	si:ch1073-335m2.2	100	68.537	ENSFHEG00000004544	si:ch1073-335m2.2	100	68.506	Fundulus_heteroclitus
ENSORLG00015005537	si:ch1073-335m2.2	100	62.309	ENSGMOG00000008156	si:ch1073-335m2.2	100	62.126	Gadus_morhua
ENSORLG00015005537	si:ch1073-335m2.2	76	57.655	ENSGALG00000036932	SPEN	88	64.686	Gallus_gallus
ENSORLG00015005537	si:ch1073-335m2.2	99	83.230	ENSGAFG00000015819	-	94	83.230	Gambusia_affinis
ENSORLG00015005537	si:ch1073-335m2.2	100	70.016	ENSGAFG00000021570	si:ch1073-335m2.2	100	69.829	Gambusia_affinis
ENSORLG00015005537	si:ch1073-335m2.2	99	96.894	ENSGACG00000001176	si:ch1073-335m2.2	96	96.894	Gasterosteus_aculeatus
ENSORLG00015005537	si:ch1073-335m2.2	99	78.378	ENSGACG00000005341	-	53	83.333	Gasterosteus_aculeatus
ENSORLG00015005537	si:ch1073-335m2.2	91	79.661	ENSGAGG00000020785	SPEN	83	65.237	Gopherus_agassizii
ENSORLG00015005537	si:ch1073-335m2.2	87	64.135	ENSGGOG00000012041	SPEN	68	71.579	Gorilla_gorilla
ENSORLG00015005537	si:ch1073-335m2.2	100	69.687	ENSHBUG00000023253	si:ch1073-335m2.2	100	69.874	Haplochromis_burtoni
ENSORLG00015005537	si:ch1073-335m2.2	99	82.099	ENSHBUG00000020626	-	94	82.099	Haplochromis_burtoni
ENSORLG00015005537	si:ch1073-335m2.2	71	65.919	ENSHGLG00000019259	SPEN	56	81.657	Heterocephalus_glaber_female
ENSORLG00015005537	si:ch1073-335m2.2	57	65.919	ENSHGLG00100019294	SPEN	55	81.657	Heterocephalus_glaber_male
ENSORLG00015005537	si:ch1073-335m2.2	96	65.132	ENSHCOG00000006004	si:ch1073-335m2.2	99	65.140	Hippocampus_comes
ENSORLG00015005537	si:ch1073-335m2.2	93	57.175	ENSIPUG00000018212	si:ch1073-335m2.2	99	57.199	Ictalurus_punctatus
ENSORLG00015005537	si:ch1073-335m2.2	95	78.090	ENSIPUG00000021668	spen	90	81.366	Ictalurus_punctatus
ENSORLG00015005537	si:ch1073-335m2.2	65	66.818	ENSSTOG00000021428	SPEN	55	62.428	Ictidomys_tridecemlineatus
ENSORLG00015005537	si:ch1073-335m2.2	86	64.979	ENSJJAG00000010882	Spen	69	80.745	Jaculus_jaculus
ENSORLG00015005537	si:ch1073-335m2.2	99	83.333	ENSKMAG00000003882	-	95	83.333	Kryptolebias_marmoratus
ENSORLG00015005537	si:ch1073-335m2.2	100	71.385	ENSKMAG00000021725	si:ch1073-335m2.2	100	71.164	Kryptolebias_marmoratus
ENSORLG00015005537	si:ch1073-335m2.2	100	69.599	ENSLBEG00000020855	si:ch1073-335m2.2	100	69.391	Labrus_bergylta
ENSORLG00015005537	si:ch1073-335m2.2	82	80.864	ENSLBEG00000019129	-	88	80.864	Labrus_bergylta
ENSORLG00015005537	si:ch1073-335m2.2	87	82.456	ENSLACG00000003258	SPEN	84	76.536	Latimeria_chalumnae
ENSORLG00015005537	si:ch1073-335m2.2	92	80.368	ENSLOCG00000007896	si:ch1073-335m2.2	88	80.814	Lepisosteus_oculatus
ENSORLG00015005537	si:ch1073-335m2.2	86	67.265	ENSLAFG00000004524	SPEN	77	81.657	Loxodonta_africana
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSMFAG00000041974	SPEN	70	66.316	Macaca_fascicularis
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSMMUG00000008026	SPEN	70	66.316	Macaca_mulatta
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSMNEG00000042402	SPEN	70	66.316	Macaca_nemestrina
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSMLEG00000039293	SPEN	68	72.105	Mandrillus_leucophaeus
ENSORLG00015005537	si:ch1073-335m2.2	100	71.044	ENSMAMG00000023870	si:ch1073-335m2.2	100	71.105	Mastacembelus_armatus
ENSORLG00015005537	si:ch1073-335m2.2	100	69.456	ENSMZEG00005011762	si:ch1073-335m2.2	100	69.705	Maylandia_zebra
ENSORLG00015005537	si:ch1073-335m2.2	93	81.287	ENSMAUG00000008318	Spen	81	81.988	Mesocricetus_auratus
ENSORLG00015005537	si:ch1073-335m2.2	86	81.287	ENSMICG00000030994	SPEN	68	81.287	Microcebus_murinus
ENSORLG00015005537	si:ch1073-335m2.2	87	65.823	ENSMOCG00000016083	Spen	69	81.988	Microtus_ochrogaster
ENSORLG00015005537	si:ch1073-335m2.2	100	68.736	ENSMMOG00000021742	si:ch1073-335m2.2	100	68.992	Mola_mola
ENSORLG00015005537	si:ch1073-335m2.2	99	77.838	ENSMALG00000008625	-	52	82.099	Monopterus_albus
ENSORLG00015005537	si:ch1073-335m2.2	78	64.017	MGP_PahariEiJ_G0029076	Spen	80	81.988	Mus_pahari
ENSORLG00015005537	si:ch1073-335m2.2	83	81.287	ENSMPUG00000016317	SPEN	68	71.498	Mustela_putorius_furo
ENSORLG00015005537	si:ch1073-335m2.2	83	80.208	ENSMLUG00000010144	SPEN	99	66.544	Myotis_lucifugus
ENSORLG00015005537	si:ch1073-335m2.2	98	65.401	ENSNGAG00000000641	Spen	84	80.702	Nannospalax_galili
ENSORLG00015005537	si:ch1073-335m2.2	100	69.018	ENSNBRG00000005733	si:ch1073-335m2.2	100	69.267	Neolamprologus_brichardi
ENSORLG00015005537	si:ch1073-335m2.2	86	64.286	ENSNLEG00000007652	SPEN	68	71.579	Nomascus_leucogenys
ENSORLG00015005537	si:ch1073-335m2.2	77	76.842	ENSMEUG00000002422	SPEN	65	76.842	Notamacropus_eugenii
ENSORLG00015005537	si:ch1073-335m2.2	59	66.071	ENSOPRG00000015800	SPEN	67	81.287	Ochotona_princeps
ENSORLG00015005537	si:ch1073-335m2.2	100	74.866	ENSONIG00000006573	-	93	82.716	Oreochromis_niloticus
ENSORLG00015005537	si:ch1073-335m2.2	86	65.625	ENSOCUG00000010840	SPEN	77	81.287	Oryctolagus_cuniculus
ENSORLG00015005537	si:ch1073-335m2.2	100	98.361	ENSORLG00000018414	si:ch1073-335m2.2	100	98.361	Oryzias_latipes
ENSORLG00015005537	si:ch1073-335m2.2	86	82.840	ENSORLG00000028894	-	96	82.716	Oryzias_latipes
ENSORLG00015005537	si:ch1073-335m2.2	70	82.840	ENSORLG00020007735	-	80	82.840	Oryzias_latipes_hni
ENSORLG00015005537	si:ch1073-335m2.2	100	98.582	ENSORLG00020009351	si:ch1073-335m2.2	100	98.582	Oryzias_latipes_hni
ENSORLG00015005537	si:ch1073-335m2.2	100	90.439	ENSOMEG00000004509	si:ch1073-335m2.2	100	90.502	Oryzias_melastigma
ENSORLG00015005537	si:ch1073-335m2.2	84	81.287	ENSOGAG00000025110	SPEN	70	66.434	Otolemur_garnettii
ENSORLG00015005537	si:ch1073-335m2.2	86	64.979	ENSOARG00000008477	SPEN	69	74.595	Ovis_aries
ENSORLG00015005537	si:ch1073-335m2.2	77	64.135	ENSPPAG00000035690	SPEN	68	71.579	Pan_paniscus
ENSORLG00015005537	si:ch1073-335m2.2	77	64.135	ENSPTRG00000000210	SPEN	68	71.579	Pan_troglodytes
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSPANG00000006293	SPEN	67	81.287	Papio_anubis
ENSORLG00015005537	si:ch1073-335m2.2	100	75.879	ENSPKIG00000002617	SPEN	94	78.652	Paramormyrops_kingsleyae
ENSORLG00015005537	si:ch1073-335m2.2	97	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	97	92.857	Paramormyrops_kingsleyae
ENSORLG00015005537	si:ch1073-335m2.2	99	76.536	ENSPSIG00000008026	SPEN	87	59.842	Pelodiscus_sinensis
ENSORLG00015005537	si:ch1073-335m2.2	86	64.435	ENSPEMG00000022997	Spen	70	81.287	Peromyscus_maniculatus_bairdii
ENSORLG00015005537	si:ch1073-335m2.2	100	69.638	ENSPFOG00000017986	si:ch1073-335m2.2	100	69.626	Poecilia_formosa
ENSORLG00015005537	si:ch1073-335m2.2	100	70.074	ENSPLAG00000016625	si:ch1073-335m2.2	100	69.919	Poecilia_latipinna
ENSORLG00015005537	si:ch1073-335m2.2	100	69.824	ENSPMEG00000002674	si:ch1073-335m2.2	100	69.811	Poecilia_mexicana
ENSORLG00015005537	si:ch1073-335m2.2	99	83.230	ENSPMEG00000006764	-	94	83.230	Poecilia_mexicana
ENSORLG00015005537	si:ch1073-335m2.2	100	70.009	ENSPREG00000005357	si:ch1073-335m2.2	100	70.071	Poecilia_reticulata
ENSORLG00015005537	si:ch1073-335m2.2	99	83.230	ENSPREG00000010399	-	94	83.230	Poecilia_reticulata
ENSORLG00015005537	si:ch1073-335m2.2	86	64.286	ENSPPYG00000001834	SPEN	68	71.579	Pongo_abelii
ENSORLG00015005537	si:ch1073-335m2.2	81	56.701	ENSPCAG00000009543	SPEN	68	80.117	Procavia_capensis
ENSORLG00015005537	si:ch1073-335m2.2	88	54.452	ENSPCOG00000021735	SPEN	71	63.520	Propithecus_coquereli
ENSORLG00015005537	si:ch1073-335m2.2	62	79.532	ENSPVAG00000013794	SPEN	52	79.532	Pteropus_vampyrus
ENSORLG00015005537	si:ch1073-335m2.2	100	69.477	ENSPNYG00000009042	si:ch1073-335m2.2	100	69.696	Pundamilia_nyererei
ENSORLG00015005537	si:ch1073-335m2.2	99	82.099	ENSPNYG00000012379	-	52	82.099	Pundamilia_nyererei
ENSORLG00015005537	si:ch1073-335m2.2	99	78.613	ENSPNAG00000020795	spen	87	80.745	Pygocentrus_nattereri
ENSORLG00015005537	si:ch1073-335m2.2	100	55.622	ENSPNAG00000011452	si:ch1073-335m2.2	100	55.556	Pygocentrus_nattereri
ENSORLG00015005537	si:ch1073-335m2.2	66	63.673	ENSRNOG00000033556	Spen	53	81.988	Rattus_norvegicus
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSRBIG00000039654	SPEN	71	65.417	Rhinopithecus_bieti
ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	ENSRROG00000035686	SPEN	70	65.422	Rhinopithecus_roxellana
ENSORLG00015005537	si:ch1073-335m2.2	86	64.286	ENSSBOG00000028770	SPEN	71	65.181	Saimiri_boliviensis_boliviensis
ENSORLG00015005537	si:ch1073-335m2.2	83	44.159	ENSSHAG00000004960	SPEN	99	67.784	Sarcophilus_harrisii
ENSORLG00015005537	si:ch1073-335m2.2	87	76.684	ENSSFOG00015007131	si:ch1073-335m2.2	92	79.545	Scleropages_formosus
ENSORLG00015005537	si:ch1073-335m2.2	99	85.185	ENSSFOG00015010267	si:ch1073-335m2.2	97	85.185	Scleropages_formosus
ENSORLG00015005537	si:ch1073-335m2.2	99	78.919	ENSSMAG00000008996	-	95	83.333	Scophthalmus_maximus
ENSORLG00015005537	si:ch1073-335m2.2	100	70.792	ENSSMAG00000000125	si:ch1073-335m2.2	100	71.007	Scophthalmus_maximus
ENSORLG00015005537	si:ch1073-335m2.2	75	75.401	ENSSDUG00000003476	-	95	83.333	Seriola_dumerili
ENSORLG00015005537	si:ch1073-335m2.2	100	73.046	ENSSDUG00000008416	si:ch1073-335m2.2	100	73.099	Seriola_dumerili
ENSORLG00015005537	si:ch1073-335m2.2	97	75.445	ENSSLDG00000023347	si:ch1073-335m2.2	60	75.694	Seriola_lalandi_dorsalis
ENSORLG00015005537	si:ch1073-335m2.2	74	78.919	ENSSLDG00000012950	-	95	83.333	Seriola_lalandi_dorsalis
ENSORLG00015005537	si:ch1073-335m2.2	62	86.111	ENSSPUG00000001866	-	73	79.661	Sphenodon_punctatus
ENSORLG00015005537	si:ch1073-335m2.2	100	74.546	ENSSPAG00000012454	si:ch1073-335m2.2	100	74.577	Stegastes_partitus
ENSORLG00015005537	si:ch1073-335m2.2	100	59.091	ENSSPAG00000006014	-	96	82.716	Stegastes_partitus
ENSORLG00015005537	si:ch1073-335m2.2	77	57.114	ENSSSCG00000034484	SPEN	57	65.006	Sus_scrofa
ENSORLG00015005537	si:ch1073-335m2.2	74	74.611	ENSTRUG00000024350	-	94	65.308	Takifugu_rubripes
ENSORLG00015005537	si:ch1073-335m2.2	87	64.085	ENSTRUG00000021008	si:ch1073-335m2.2	100	63.876	Takifugu_rubripes
ENSORLG00015005537	si:ch1073-335m2.2	100	66.748	ENSTNIG00000014666	si:ch1073-335m2.2	100	66.585	Tetraodon_nigroviridis
ENSORLG00015005537	si:ch1073-335m2.2	59	81.287	ENSTBEG00000003628	SPEN	53	81.988	Tupaia_belangeri
ENSORLG00015005537	si:ch1073-335m2.2	77	81.287	ENSTTRG00000015704	SPEN	60	81.988	Tursiops_truncatus
ENSORLG00015005537	si:ch1073-335m2.2	84	82.609	ENSUAMG00000009600	SPEN	69	82.609	Ursus_americanus
ENSORLG00015005537	si:ch1073-335m2.2	83	82.609	ENSUMAG00000021641	SPEN	69	82.609	Ursus_maritimus
ENSORLG00015005537	si:ch1073-335m2.2	77	92.857	ENSVVUG00000028951	SPEN	68	92.857	Vulpes_vulpes
ENSORLG00015005537	si:ch1073-335m2.2	100	66.646	ENSXCOG00000004516	si:ch1073-335m2.2	100	66.718	Xiphophorus_couchianus
ENSORLG00015005537	si:ch1073-335m2.2	100	69.758	ENSXMAG00000029887	si:ch1073-335m2.2	100	69.827	Xiphophorus_maculatus
ENSORLG00015005537	si:ch1073-335m2.2	99	82.609	ENSXMAG00000021384	-	94	82.609	Xiphophorus_maculatus