EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015005829 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 12852 bases
Position: chr13:14143647-14156498
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015024961	GTP_EFTU	PF00009.27	2e-62	1	1
ENSORLP00015024961	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSORLP00015024961	EFG_IV	PF03764.18	2.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015006617	-	3481	-	ENSORLP00015024961	748 (aa)	-	-

Gene Model

Click here to download ENSORLG00015005829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015005829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015005829	gfm1	58	30.723	ENSORLG00015002611	eftud2	52	30.723
ENSORLG00015005829	gfm1	92	32.922	ENSORLG00015018196	gfm2	99	32.594
ENSORLG00015005829	gfm1	73	38.926	ENSORLG00015021481	-	72	38.926
ENSORLG00015005829	gfm1	74	39.597	ENSORLG00015017743	EEF2	73	39.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015005829	gfm1	97	80.441	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSORLG00015005829	gfm1	92	88.372	ENSAPOG00000016489	gfm1	98	88.372	Acanthochromis_polyacanthus
ENSORLG00015005829	gfm1	96	81.894	ENSAMEG00000013542	GFM1	95	81.894	Ailuropoda_melanoleuca
ENSORLG00015005829	gfm1	97	85.517	ENSACIG00000014465	gfm1	94	85.517	Amphilophus_citrinellus
ENSORLG00015005829	gfm1	100	88.503	ENSAOCG00000006023	gfm1	100	88.503	Amphiprion_ocellaris
ENSORLG00015005829	gfm1	100	88.369	ENSAPEG00000024499	gfm1	100	88.369	Amphiprion_percula
ENSORLG00015005829	gfm1	100	88.102	ENSATEG00000013789	gfm1	100	88.102	Anabas_testudineus
ENSORLG00015005829	gfm1	97	80.552	ENSAPLG00000005022	GFM1	100	80.552	Anas_platyrhynchos
ENSORLG00015005829	gfm1	99	79.567	ENSACAG00000006829	GFM1	100	79.567	Anolis_carolinensis
ENSORLG00015005829	gfm1	97	80.028	ENSANAG00000035983	GFM1	97	80.028	Aotus_nancymaae
ENSORLG00015005829	gfm1	100	90.107	ENSACLG00000016586	gfm1	100	90.107	Astatotilapia_calliptera
ENSORLG00015005829	gfm1	100	83.622	ENSAMXG00000013435	gfm1	97	85.615	Astyanax_mexicanus
ENSORLG00015005829	gfm1	96	80.919	ENSBTAG00000027795	GFM1	95	80.919	Bos_taurus
ENSORLG00015005829	gfm1	94	57.000	WBGene00009246	gfm-1	95	56.681	Caenorhabditis_elegans
ENSORLG00015005829	gfm1	97	80.579	ENSCJAG00000000363	GFM1	97	80.579	Callithrix_jacchus
ENSORLG00015005829	gfm1	96	81.755	ENSCAFG00000009006	GFM1	100	81.509	Canis_familiaris
ENSORLG00015005829	gfm1	96	81.755	ENSCAFG00020005878	GFM1	98	81.755	Canis_lupus_dingo
ENSORLG00015005829	gfm1	96	81.058	ENSCHIG00000015220	GFM1	95	81.058	Capra_hircus
ENSORLG00015005829	gfm1	97	81.267	ENSTSYG00000002013	GFM1	96	81.267	Carlito_syrichta
ENSORLG00015005829	gfm1	99	69.303	ENSCAPG00000005699	GFM1	99	69.303	Cavia_aperea
ENSORLG00015005829	gfm1	97	80.716	ENSCPOG00000001194	GFM1	96	80.716	Cavia_porcellus
ENSORLG00015005829	gfm1	97	80.303	ENSCCAG00000025561	GFM1	97	80.303	Cebus_capucinus
ENSORLG00015005829	gfm1	97	80.716	ENSCATG00000037622	GFM1	97	80.716	Cercocebus_atys
ENSORLG00015005829	gfm1	97	79.752	ENSCLAG00000002503	GFM1	96	79.752	Chinchilla_lanigera
ENSORLG00015005829	gfm1	97	80.854	ENSCSAG00000012162	GFM1	97	80.854	Chlorocebus_sabaeus
ENSORLG00015005829	gfm1	97	72.314	ENSCHOG00000004867	GFM1	96	72.314	Choloepus_hoffmanni
ENSORLG00015005829	gfm1	99	80.295	ENSCPBG00000018367	GFM1	99	80.295	Chrysemys_picta_bellii
ENSORLG00015005829	gfm1	94	59.275	ENSCING00000011960	-	93	59.275	Ciona_intestinalis
ENSORLG00015005829	gfm1	95	58.750	ENSCSAVG00000008514	-	99	58.750	Ciona_savignyi
ENSORLG00015005829	gfm1	97	80.854	ENSCANG00000031714	GFM1	97	80.854	Colobus_angolensis_palliatus
ENSORLG00015005829	gfm1	97	80.552	ENSCGRG00001022095	GFM1	97	80.552	Cricetulus_griseus_chok1gshd
ENSORLG00015005829	gfm1	97	80.552	ENSCGRG00000012043	GFM1	97	80.552	Cricetulus_griseus_crigri
ENSORLG00015005829	gfm1	97	82.573	ENSCSEG00000017088	gfm1	99	82.573	Cynoglossus_semilaevis
ENSORLG00015005829	gfm1	100	91.176	ENSCVAG00000004126	gfm1	100	91.176	Cyprinodon_variegatus
ENSORLG00015005829	gfm1	100	82.353	ENSDARG00000063624	gfm1	100	82.353	Danio_rerio
ENSORLG00015005829	gfm1	55	78.973	ENSDNOG00000016385	-	100	78.973	Dasypus_novemcinctus
ENSORLG00015005829	gfm1	97	79.724	ENSDORG00000014165	Gfm1	96	79.724	Dipodomys_ordii
ENSORLG00015005829	gfm1	98	66.532	FBgn0263133	mEFG1	99	66.532	Drosophila_melanogaster
ENSORLG00015005829	gfm1	96	73.648	ENSETEG00000019197	GFM1	95	73.648	Echinops_telfairi
ENSORLG00015005829	gfm1	89	63.609	ENSEBUG00000012794	gfm1	99	63.609	Eptatretus_burgeri
ENSORLG00015005829	gfm1	96	60.083	ENSEEUG00000000429	GFM1	99	60.083	Erinaceus_europaeus
ENSORLG00015005829	gfm1	100	86.230	ENSELUG00000014728	gfm1	100	86.230	Esox_lucius
ENSORLG00015005829	gfm1	97	81.405	ENSFCAG00000013291	GFM1	96	81.405	Felis_catus
ENSORLG00015005829	gfm1	90	80.889	ENSFALG00000007619	GFM1	100	80.889	Ficedula_albicollis
ENSORLG00015005829	gfm1	97	80.165	ENSFDAG00000016559	GFM1	96	80.165	Fukomys_damarensis
ENSORLG00015005829	gfm1	100	89.840	ENSFHEG00000006091	gfm1	100	89.840	Fundulus_heteroclitus
ENSORLG00015005829	gfm1	97	86.245	ENSGMOG00000010161	gfm1	100	86.245	Gadus_morhua
ENSORLG00015005829	gfm1	97	80.552	ENSGALG00000009634	GFM1	98	80.552	Gallus_gallus
ENSORLG00015005829	gfm1	100	90.241	ENSGAFG00000012527	gfm1	100	90.241	Gambusia_affinis
ENSORLG00015005829	gfm1	99	88.904	ENSGACG00000009864	gfm1	99	88.904	Gasterosteus_aculeatus
ENSORLG00015005829	gfm1	97	80.716	ENSGGOG00000003085	GFM1	97	80.716	Gorilla_gorilla
ENSORLG00015005829	gfm1	100	90.241	ENSHBUG00000002120	gfm1	100	90.241	Haplochromis_burtoni
ENSORLG00015005829	gfm1	99	78.331	ENSHGLG00000016855	GFM1	99	78.226	Heterocephalus_glaber_female
ENSORLG00015005829	gfm1	99	78.331	ENSHGLG00100013049	GFM1	99	78.226	Heterocephalus_glaber_male
ENSORLG00015005829	gfm1	100	88.235	ENSHCOG00000007638	gfm1	100	88.235	Hippocampus_comes
ENSORLG00015005829	gfm1	100	84.225	ENSIPUG00000005873	gfm1	100	84.225	Ictalurus_punctatus
ENSORLG00015005829	gfm1	97	78.512	ENSSTOG00000010150	GFM1	98	78.512	Ictidomys_tridecemlineatus
ENSORLG00015005829	gfm1	97	80.138	ENSJJAG00000016447	Gfm1	97	80.138	Jaculus_jaculus
ENSORLG00015005829	gfm1	100	87.299	ENSKMAG00000020768	gfm1	100	87.299	Kryptolebias_marmoratus
ENSORLG00015005829	gfm1	94	90.300	ENSLBEG00000021315	gfm1	100	90.300	Labrus_bergylta
ENSORLG00015005829	gfm1	98	80.274	ENSLACG00000012295	GFM1	99	80.274	Latimeria_chalumnae
ENSORLG00015005829	gfm1	97	79.070	ENSLOCG00000003778	gfm1	100	79.070	Lepisosteus_oculatus
ENSORLG00015005829	gfm1	99	77.036	ENSLAFG00000010945	GFM1	99	77.917	Loxodonta_africana
ENSORLG00015005829	gfm1	97	80.716	ENSMFAG00000035731	GFM1	97	80.716	Macaca_fascicularis
ENSORLG00015005829	gfm1	97	80.716	ENSMMUG00000004961	GFM1	97	80.716	Macaca_mulatta
ENSORLG00015005829	gfm1	97	80.579	ENSMNEG00000033245	GFM1	97	80.579	Macaca_nemestrina
ENSORLG00015005829	gfm1	97	79.034	ENSMLEG00000030908	GFM1	99	78.784	Mandrillus_leucophaeus
ENSORLG00015005829	gfm1	100	88.503	ENSMAMG00000011760	gfm1	100	88.503	Mastacembelus_armatus
ENSORLG00015005829	gfm1	100	90.241	ENSMZEG00005016639	gfm1	100	90.241	Maylandia_zebra
ENSORLG00015005829	gfm1	97	80.801	ENSMGAG00000010641	GFM1	97	80.801	Meleagris_gallopavo
ENSORLG00015005829	gfm1	97	80.828	ENSMAUG00000000611	Gfm1	97	80.828	Mesocricetus_auratus
ENSORLG00015005829	gfm1	97	80.992	ENSMICG00000049086	GFM1	96	80.992	Microcebus_murinus
ENSORLG00015005829	gfm1	96	81.502	ENSMOCG00000000465	Gfm1	96	81.502	Microtus_ochrogaster
ENSORLG00015005829	gfm1	97	89.118	ENSMMOG00000012538	gfm1	98	89.118	Mola_mola
ENSORLG00015005829	gfm1	97	80.414	ENSMODG00000015673	GFM1	98	80.414	Monodelphis_domestica
ENSORLG00015005829	gfm1	96	88.563	ENSMALG00000012508	gfm1	95	88.563	Monopterus_albus
ENSORLG00015005829	gfm1	96	81.172	MGP_CAROLIEiJ_G0025052	Gfm1	95	81.172	Mus_caroli
ENSORLG00015005829	gfm1	96	81.032	ENSMUSG00000027774	Gfm1	95	81.032	Mus_musculus
ENSORLG00015005829	gfm1	97	80.000	MGP_PahariEiJ_G0026495	Gfm1	97	80.000	Mus_pahari
ENSORLG00015005829	gfm1	96	81.032	MGP_SPRETEiJ_G0025994	Gfm1	95	81.032	Mus_spretus
ENSORLG00015005829	gfm1	98	80.790	ENSMPUG00000002859	GFM1	97	80.790	Mustela_putorius_furo
ENSORLG00015005829	gfm1	97	81.267	ENSMLUG00000000452	GFM1	96	81.267	Myotis_lucifugus
ENSORLG00015005829	gfm1	97	80.414	ENSNGAG00000012375	Gfm1	97	80.414	Nannospalax_galili
ENSORLG00015005829	gfm1	97	90.659	ENSNBRG00000004631	gfm1	99	90.659	Neolamprologus_brichardi
ENSORLG00015005829	gfm1	97	80.716	ENSNLEG00000004176	GFM1	97	80.716	Nomascus_leucogenys
ENSORLG00015005829	gfm1	91	72.353	ENSMEUG00000007784	GFM1	99	72.353	Notamacropus_eugenii
ENSORLG00015005829	gfm1	98	79.945	ENSOPRG00000009860	GFM1	99	79.945	Ochotona_princeps
ENSORLG00015005829	gfm1	97	80.716	ENSODEG00000004316	GFM1	96	80.716	Octodon_degus
ENSORLG00015005829	gfm1	100	90.374	ENSONIG00000003772	gfm1	100	90.374	Oreochromis_niloticus
ENSORLG00015005829	gfm1	97	81.456	ENSOCUG00000013561	GFM1	97	81.456	Oryctolagus_cuniculus
ENSORLG00015005829	gfm1	95	99.294	ENSORLG00000006487	gfm1	100	99.294	Oryzias_latipes
ENSORLG00015005829	gfm1	100	98.930	ENSORLG00020003362	gfm1	100	98.930	Oryzias_latipes_hni
ENSORLG00015005829	gfm1	100	94.920	ENSOMEG00000012894	gfm1	100	94.920	Oryzias_melastigma
ENSORLG00015005829	gfm1	97	80.165	ENSOGAG00000008298	GFM1	96	80.165	Otolemur_garnettii
ENSORLG00015005829	gfm1	96	80.305	ENSOARG00000002409	GFM1	99	80.305	Ovis_aries
ENSORLG00015005829	gfm1	97	80.716	ENSPPAG00000033881	GFM1	97	80.716	Pan_paniscus
ENSORLG00015005829	gfm1	97	81.405	ENSPPRG00000009281	GFM1	96	81.405	Panthera_pardus
ENSORLG00015005829	gfm1	97	81.267	ENSPTIG00000012416	GFM1	96	81.267	Panthera_tigris_altaica
ENSORLG00015005829	gfm1	97	80.716	ENSPTRG00000015570	GFM1	97	80.716	Pan_troglodytes
ENSORLG00015005829	gfm1	97	80.579	ENSPANG00000016512	GFM1	97	80.579	Papio_anubis
ENSORLG00015005829	gfm1	100	82.487	ENSPKIG00000004876	gfm1	100	82.487	Paramormyrops_kingsleyae
ENSORLG00015005829	gfm1	99	80.027	ENSPSIG00000012567	GFM1	99	80.027	Pelodiscus_sinensis
ENSORLG00015005829	gfm1	97	87.172	ENSPMGG00000014068	gfm1	100	87.172	Periophthalmus_magnuspinnatus
ENSORLG00015005829	gfm1	97	80.690	ENSPEMG00000008942	Gfm1	97	80.690	Peromyscus_maniculatus_bairdii
ENSORLG00015005829	gfm1	86	77.812	ENSPCIG00000020195	GFM1	96	80.097	Phascolarctos_cinereus
ENSORLG00015005829	gfm1	100	90.775	ENSPFOG00000011022	gfm1	100	90.775	Poecilia_formosa
ENSORLG00015005829	gfm1	97	91.298	ENSPLAG00000019585	gfm1	100	90.169	Poecilia_latipinna
ENSORLG00015005829	gfm1	100	90.642	ENSPMEG00000012376	gfm1	100	90.642	Poecilia_mexicana
ENSORLG00015005829	gfm1	100	90.775	ENSPREG00000001332	gfm1	95	90.775	Poecilia_reticulata
ENSORLG00015005829	gfm1	97	80.579	ENSPPYG00000014244	GFM1	97	80.579	Pongo_abelii
ENSORLG00015005829	gfm1	94	78.521	ENSPCAG00000008934	GFM1	100	78.521	Procavia_capensis
ENSORLG00015005829	gfm1	98	80.491	ENSPCOG00000022259	GFM1	97	80.491	Propithecus_coquereli
ENSORLG00015005829	gfm1	97	80.028	ENSPVAG00000013605	GFM1	96	80.028	Pteropus_vampyrus
ENSORLG00015005829	gfm1	100	89.973	ENSPNYG00000006037	gfm1	100	89.973	Pundamilia_nyererei
ENSORLG00015005829	gfm1	100	84.759	ENSPNAG00000001237	gfm1	100	84.759	Pygocentrus_nattereri
ENSORLG00015005829	gfm1	100	78.238	ENSRNOG00000012873	Gfm1	99	78.238	Rattus_norvegicus
ENSORLG00015005829	gfm1	97	80.579	ENSRBIG00000031363	GFM1	97	80.579	Rhinopithecus_bieti
ENSORLG00015005829	gfm1	97	80.716	ENSRROG00000031081	GFM1	97	80.716	Rhinopithecus_roxellana
ENSORLG00015005829	gfm1	96	53.942	YLR069C	-	94	53.942	Saccharomyces_cerevisiae
ENSORLG00015005829	gfm1	97	80.303	ENSSBOG00000023252	GFM1	97	80.303	Saimiri_boliviensis_boliviensis
ENSORLG00015005829	gfm1	99	80.323	ENSSHAG00000017772	GFM1	98	80.790	Sarcophilus_harrisii
ENSORLG00015005829	gfm1	100	83.445	ENSSFOG00015003117	gfm1	100	83.445	Scleropages_formosus
ENSORLG00015005829	gfm1	100	88.235	ENSSMAG00000013221	gfm1	100	88.235	Scophthalmus_maximus
ENSORLG00015005829	gfm1	100	89.305	ENSSDUG00000018665	gfm1	100	89.305	Seriola_dumerili
ENSORLG00015005829	gfm1	100	89.171	ENSSLDG00000020606	gfm1	100	89.171	Seriola_lalandi_dorsalis
ENSORLG00015005829	gfm1	99	78.890	ENSSPUG00000018686	GFM1	100	78.890	Sphenodon_punctatus
ENSORLG00015005829	gfm1	100	90.508	ENSSPAG00000008800	gfm1	100	90.508	Stegastes_partitus
ENSORLG00015005829	gfm1	96	80.780	ENSSSCG00000025651	GFM1	95	80.780	Sus_scrofa
ENSORLG00015005829	gfm1	100	85.695	ENSTRUG00000009244	gfm1	100	85.695	Takifugu_rubripes
ENSORLG00015005829	gfm1	100	89.171	ENSTNIG00000007729	gfm1	100	89.171	Tetraodon_nigroviridis
ENSORLG00015005829	gfm1	90	73.037	ENSTBEG00000017404	GFM1	89	73.037	Tupaia_belangeri
ENSORLG00015005829	gfm1	96	80.780	ENSTTRG00000001735	GFM1	95	80.780	Tursiops_truncatus
ENSORLG00015005829	gfm1	98	80.628	ENSUAMG00000026381	GFM1	97	80.628	Ursus_americanus
ENSORLG00015005829	gfm1	98	80.628	ENSUMAG00000011268	GFM1	97	80.628	Ursus_maritimus
ENSORLG00015005829	gfm1	97	77.793	ENSVPAG00000009444	GFM1	96	77.793	Vicugna_pacos
ENSORLG00015005829	gfm1	96	81.564	ENSVVUG00000020091	GFM1	100	81.213	Vulpes_vulpes
ENSORLG00015005829	gfm1	96	83.705	ENSXETG00000032551	GFM1	95	83.705	Xenopus_tropicalis
ENSORLG00015005829	gfm1	54	87.562	ENSXCOG00000012590	gfm1	92	87.562	Xiphophorus_couchianus
ENSORLG00015005829	gfm1	100	90.642	ENSXMAG00000000261	gfm1	100	90.642	Xiphophorus_maculatus