EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015005867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 18808 bases
Position: chr19:11196535-11215342
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005091	tRNA_anti-codon	PF01336.25	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015006510	-	1533	-	ENSORLP00015005091	437 (aa)	-	-

Gene Model

Click here to download ENSORLG00015005867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015005867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015005867	-	99	100.000	ENSORLG00015020383	RPA1	67	100.000
ENSORLG00015005867	-	94	68.841	ENSORLG00015013982	rpa1	69	68.841

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015005867	-	95	67.391	ENSAPOG00000011658	rpa1	74	67.391	Acanthochromis_polyacanthus
ENSORLG00015005867	-	99	81.797	ENSAPOG00000019409	RPA1	63	81.797	Acanthochromis_polyacanthus
ENSORLG00015005867	-	98	59.862	ENSAMEG00000007706	RPA1	70	59.862	Ailuropoda_melanoleuca
ENSORLG00015005867	-	81	65.352	ENSACIG00000007277	rpa1	63	65.352	Amphilophus_citrinellus
ENSORLG00015005867	-	99	82.258	ENSACIG00000012881	RPA1	73	82.258	Amphilophus_citrinellus
ENSORLG00015005867	-	93	68.305	ENSAOCG00000023376	rpa1	73	68.305	Amphiprion_ocellaris
ENSORLG00015005867	-	99	81.465	ENSAOCG00000009003	RPA1	67	81.465	Amphiprion_ocellaris
ENSORLG00015005867	-	95	67.874	ENSAPEG00000008634	rpa1	74	67.874	Amphiprion_percula
ENSORLG00015005867	-	99	81.922	ENSAPEG00000019132	RPA1	66	81.922	Amphiprion_percula
ENSORLG00015005867	-	95	66.667	ENSATEG00000022024	rpa1	73	66.667	Anabas_testudineus
ENSORLG00015005867	-	99	80.455	ENSATEG00000006443	RPA1	67	80.455	Anabas_testudineus
ENSORLG00015005867	-	98	52.673	ENSAPLG00000012442	RPA1	75	52.673	Anas_platyrhynchos
ENSORLG00015005867	-	96	57.944	ENSACAG00000014490	RPA1	71	58.178	Anolis_carolinensis
ENSORLG00015005867	-	98	60.000	ENSANAG00000023456	RPA1	76	60.185	Aotus_nancymaae
ENSORLG00015005867	-	97	66.901	ENSACLG00000006640	rpa1	76	66.901	Astatotilapia_calliptera
ENSORLG00015005867	-	99	82.258	ENSACLG00000005223	RPA1	67	82.258	Astatotilapia_calliptera
ENSORLG00015005867	-	98	65.972	ENSAMXG00000008418	rpa1	74	68.523	Astyanax_mexicanus
ENSORLG00015005867	-	98	60.000	ENSBTAG00000009711	RPA1	71	60.000	Bos_taurus
ENSORLG00015005867	-	98	60.000	ENSCJAG00000001848	RPA1	71	60.000	Callithrix_jacchus
ENSORLG00015005867	-	99	60.508	ENSCAFG00000019249	RPA1	70	60.739	Canis_familiaris
ENSORLG00015005867	-	99	60.508	ENSCAFG00020009847	RPA1	70	60.739	Canis_lupus_dingo
ENSORLG00015005867	-	98	60.000	ENSCHIG00000026308	RPA1	71	60.000	Capra_hircus
ENSORLG00015005867	-	92	62.315	ENSTSYG00000003482	-	66	62.315	Carlito_syrichta
ENSORLG00015005867	-	98	60.230	ENSCPOG00000000035	RPA1	71	60.230	Cavia_porcellus
ENSORLG00015005867	-	98	49.770	ENSCCAG00000010981	RPA1	68	49.770	Cebus_capucinus
ENSORLG00015005867	-	98	56.912	ENSCLAG00000015045	-	70	56.912	Chinchilla_lanigera
ENSORLG00015005867	-	98	61.379	ENSCLAG00000005185	-	71	61.379	Chinchilla_lanigera
ENSORLG00015005867	-	94	51.332	ENSCSAG00000013833	RPA1	64	51.332	Chlorocebus_sabaeus
ENSORLG00015005867	-	91	64.500	ENSCHOG00000009454	-	91	64.500	Choloepus_hoffmanni
ENSORLG00015005867	-	94	63.043	ENSCHOG00000013540	-	70	63.043	Choloepus_hoffmanni
ENSORLG00015005867	-	97	61.663	ENSCPBG00000020377	RPA1	76	61.663	Chrysemys_picta_bellii
ENSORLG00015005867	-	98	46.882	ENSCING00000023482	-	71	46.882	Ciona_intestinalis
ENSORLG00015005867	-	94	61.836	ENSCANG00000030911	RPA1	72	61.836	Colobus_angolensis_palliatus
ENSORLG00015005867	-	99	60.508	ENSCGRG00001008197	Rpa1	70	60.508	Cricetulus_griseus_chok1gshd
ENSORLG00015005867	-	99	60.508	ENSCGRG00000000582	Rpa1	85	60.508	Cricetulus_griseus_crigri
ENSORLG00015005867	-	99	70.481	ENSCSEG00000012726	RPA1	74	70.481	Cynoglossus_semilaevis
ENSORLG00015005867	-	94	65.534	ENSCSEG00000013066	rpa1	70	65.534	Cynoglossus_semilaevis
ENSORLG00015005867	-	99	83.371	ENSCVAG00000013446	-	65	83.371	Cyprinodon_variegatus
ENSORLG00015005867	-	96	65.394	ENSCVAG00000019431	rpa1	74	65.394	Cyprinodon_variegatus
ENSORLG00015005867	-	95	68.675	ENSDARG00000003938	rpa1	68	68.675	Danio_rerio
ENSORLG00015005867	-	94	62.560	ENSDNOG00000017218	RPA1	67	62.560	Dasypus_novemcinctus
ENSORLG00015005867	-	98	62.069	ENSDORG00000006199	Rpa1	71	62.069	Dipodomys_ordii
ENSORLG00015005867	-	93	44.878	FBgn0010173	RpA-70	72	44.700	Drosophila_melanogaster
ENSORLG00015005867	-	74	66.154	ENSETEG00000017608	RPA1	54	66.154	Echinops_telfairi
ENSORLG00015005867	-	97	60.514	ENSEASG00005009372	RPA1	81	60.514	Equus_asinus_asinus
ENSORLG00015005867	-	94	61.594	ENSECAG00000023886	RPA1	67	61.594	Equus_caballus
ENSORLG00015005867	-	88	63.472	ENSEEUG00000002186	-	63	63.472	Erinaceus_europaeus
ENSORLG00015005867	-	98	65.438	ENSELUG00000021071	rpa1	71	65.438	Esox_lucius
ENSORLG00015005867	-	88	71.948	ENSELUG00000006136	RPA1	76	71.948	Esox_lucius
ENSORLG00015005867	-	99	61.201	ENSFCAG00000006306	RPA1	70	61.201	Felis_catus
ENSORLG00015005867	-	94	61.743	ENSFALG00000006575	RPA1	67	61.743	Ficedula_albicollis
ENSORLG00015005867	-	98	60.230	ENSFDAG00000007720	RPA1	71	60.230	Fukomys_damarensis
ENSORLG00015005867	-	95	65.542	ENSFHEG00000003580	rpa1	68	65.542	Fundulus_heteroclitus
ENSORLG00015005867	-	95	65.942	ENSGMOG00000010382	rpa1	72	65.942	Gadus_morhua
ENSORLG00015005867	-	96	61.905	ENSGALG00000003072	RPA1	68	61.905	Gallus_gallus
ENSORLG00015005867	-	99	81.797	ENSGAFG00000020953	RPA1	66	81.797	Gambusia_affinis
ENSORLG00015005867	-	97	64.471	ENSGAFG00000012916	rpa1	68	67.839	Gambusia_affinis
ENSORLG00015005867	-	95	65.217	ENSGACG00000010856	rpa1	70	65.133	Gasterosteus_aculeatus
ENSORLG00015005867	-	97	62.736	ENSGAGG00000013611	RPA1	69	62.736	Gopherus_agassizii
ENSORLG00015005867	-	95	61.814	ENSGGOG00000014186	RPA1	71	61.814	Gorilla_gorilla
ENSORLG00015005867	-	97	66.667	ENSHBUG00000017773	rpa1	71	66.667	Haplochromis_burtoni
ENSORLG00015005867	-	94	70.433	ENSHBUG00000009348	RPA1	72	70.433	Haplochromis_burtoni
ENSORLG00015005867	-	98	60.920	ENSHGLG00000008846	RPA1	71	60.920	Heterocephalus_glaber_female
ENSORLG00015005867	-	98	60.920	ENSHGLG00100017755	-	71	60.920	Heterocephalus_glaber_male
ENSORLG00015005867	-	98	57.011	ENSHGLG00100000799	-	72	57.011	Heterocephalus_glaber_male
ENSORLG00015005867	-	96	55.269	ENSHGLG00100002005	-	72	55.269	Heterocephalus_glaber_male
ENSORLG00015005867	-	95	61.594	ENSHCOG00000001401	rpa1	67	61.594	Hippocampus_comes
ENSORLG00015005867	-	89	54.453	ENSHCOG00000000351	RPA1	69	54.453	Hippocampus_comes
ENSORLG00015005867	-	98	64.027	ENSIPUG00000004400	rpa1	73	64.027	Ictalurus_punctatus
ENSORLG00015005867	-	98	59.540	ENSSTOG00000022475	RPA1	72	59.540	Ictidomys_tridecemlineatus
ENSORLG00015005867	-	94	62.319	ENSJJAG00000000876	Rpa1	69	62.319	Jaculus_jaculus
ENSORLG00015005867	-	96	82.423	ENSKMAG00000000234	RPA1	68	82.423	Kryptolebias_marmoratus
ENSORLG00015005867	-	93	67.157	ENSKMAG00000005605	rpa1	67	67.402	Kryptolebias_marmoratus
ENSORLG00015005867	-	95	65.301	ENSLBEG00000021604	rpa1	72	65.301	Labrus_bergylta
ENSORLG00015005867	-	99	78.719	ENSLBEG00000002281	RPA1	65	78.719	Labrus_bergylta
ENSORLG00015005867	-	96	57.077	ENSLACG00000007210	RPA1	87	57.077	Latimeria_chalumnae
ENSORLG00015005867	-	91	67.920	ENSLOCG00000006397	rpa1	66	68.170	Lepisosteus_oculatus
ENSORLG00015005867	-	97	60.981	ENSLAFG00000015354	RPA1	68	60.981	Loxodonta_africana
ENSORLG00015005867	-	79	61.318	ENSMFAG00000036138	-	69	61.318	Macaca_fascicularis
ENSORLG00015005867	-	94	61.594	ENSMMUG00000011604	-	68	61.594	Macaca_mulatta
ENSORLG00015005867	-	94	58.454	ENSMMUG00000002442	-	69	58.454	Macaca_mulatta
ENSORLG00015005867	-	94	57.933	ENSMNEG00000029837	-	76	57.933	Macaca_nemestrina
ENSORLG00015005867	-	94	60.870	ENSMNEG00000031632	-	69	60.870	Macaca_nemestrina
ENSORLG00015005867	-	94	59.179	ENSMLEG00000038768	-	68	59.179	Mandrillus_leucophaeus
ENSORLG00015005867	-	99	77.876	ENSMAMG00000020097	RPA1	65	80.320	Mastacembelus_armatus
ENSORLG00015005867	-	98	63.869	ENSMAMG00000017993	rpa1	79	63.869	Mastacembelus_armatus
ENSORLG00015005867	-	96	67.225	ENSMZEG00005007551	rpa1	69	67.225	Maylandia_zebra
ENSORLG00015005867	-	99	82.258	ENSMZEG00005024731	RPA1	67	82.258	Maylandia_zebra
ENSORLG00015005867	-	96	61.905	ENSMGAG00000005315	RPA1	68	61.905	Meleagris_gallopavo
ENSORLG00015005867	-	99	60.739	ENSMAUG00000010474	Rpa1	72	60.739	Mesocricetus_auratus
ENSORLG00015005867	-	91	63.250	ENSMICG00000012867	RPA1	67	62.077	Microcebus_murinus
ENSORLG00015005867	-	93	61.614	ENSMOCG00000013019	Rpa1	67	61.614	Microtus_ochrogaster
ENSORLG00015005867	-	98	80.000	ENSMMOG00000010868	RPA1	70	82.338	Mola_mola
ENSORLG00015005867	-	98	64.501	ENSMMOG00000014292	rpa1	74	64.501	Mola_mola
ENSORLG00015005867	-	95	62.500	ENSMODG00000010549	RPA1	67	62.500	Monodelphis_domestica
ENSORLG00015005867	-	99	79.032	ENSMALG00000001208	RPA1	61	79.032	Monopterus_albus
ENSORLG00015005867	-	95	66.827	ENSMALG00000011453	rpa1	73	66.827	Monopterus_albus
ENSORLG00015005867	-	99	60.277	MGP_CAROLIEiJ_G0016734	Rpa1	70	60.277	Mus_caroli
ENSORLG00015005867	-	99	60.046	ENSMUSG00000000751	Rpa1	69	60.046	Mus_musculus
ENSORLG00015005867	-	97	61.449	MGP_PahariEiJ_G0017871	Rpa1	69	61.449	Mus_pahari
ENSORLG00015005867	-	99	60.277	MGP_SPRETEiJ_G0017577	Rpa1	69	60.277	Mus_spretus
ENSORLG00015005867	-	94	62.319	ENSMPUG00000013119	RPA1	71	60.230	Mustela_putorius_furo
ENSORLG00015005867	-	94	63.285	ENSMLUG00000006113	RPA1	67	63.285	Myotis_lucifugus
ENSORLG00015005867	-	99	60.970	ENSNGAG00000004522	Rpa1	69	60.970	Nannospalax_galili
ENSORLG00015005867	-	97	66.432	ENSNBRG00000020595	rpa1	75	66.432	Neolamprologus_brichardi
ENSORLG00015005867	-	90	81.519	ENSNBRG00000009672	RPA1	65	81.519	Neolamprologus_brichardi
ENSORLG00015005867	-	97	60.748	ENSNLEG00000017149	RPA1	66	62.808	Nomascus_leucogenys
ENSORLG00015005867	-	98	50.345	ENSMEUG00000006714	RPA1	72	50.345	Notamacropus_eugenii
ENSORLG00015005867	-	98	60.920	ENSODEG00000009038	RPA1	70	60.920	Octodon_degus
ENSORLG00015005867	-	98	65.589	ENSONIG00000013135	rpa1	70	65.589	Oreochromis_niloticus
ENSORLG00015005867	-	98	61.239	ENSOANG00000010880	RPA1	72	61.468	Ornithorhynchus_anatinus
ENSORLG00015005867	-	94	62.077	ENSOCUG00000001504	RPA1	64	62.077	Oryctolagus_cuniculus
ENSORLG00015005867	-	94	68.599	ENSORLG00000004856	rpa1	69	68.599	Oryzias_latipes
ENSORLG00015005867	-	99	97.912	ENSORLG00000003368	RPA1	66	97.912	Oryzias_latipes
ENSORLG00015005867	-	99	97.680	ENSORLG00020015284	RPA1	65	97.680	Oryzias_latipes_hni
ENSORLG00015005867	-	94	68.841	ENSORLG00020008980	rpa1	69	68.841	Oryzias_latipes_hni
ENSORLG00015005867	-	98	64.545	ENSOMEG00000004704	rpa1	75	65.586	Oryzias_melastigma
ENSORLG00015005867	-	99	89.145	ENSOMEG00000011040	RPA1	74	86.311	Oryzias_melastigma
ENSORLG00015005867	-	60	65.753	ENSOGAG00000029379	-	56	65.753	Otolemur_garnettii
ENSORLG00015005867	-	94	61.594	ENSOGAG00000005581	-	67	61.594	Otolemur_garnettii
ENSORLG00015005867	-	98	60.000	ENSOARG00000014479	RPA1	71	60.000	Ovis_aries
ENSORLG00015005867	-	97	60.981	ENSPPAG00000039680	RPA1	66	63.054	Pan_paniscus
ENSORLG00015005867	-	95	62.530	ENSPPRG00000011807	RPA1	68	62.530	Panthera_pardus
ENSORLG00015005867	-	95	62.530	ENSPTIG00000007898	RPA1	68	62.530	Panthera_tigris_altaica
ENSORLG00015005867	-	97	60.748	ENSPTRG00000008539	RPA1	66	62.808	Pan_troglodytes
ENSORLG00015005867	-	94	61.594	ENSPANG00000024592	RPA1	67	61.594	Papio_anubis
ENSORLG00015005867	-	97	67.757	ENSPKIG00000008053	rpa1	70	67.757	Paramormyrops_kingsleyae
ENSORLG00015005867	-	97	61.321	ENSPSIG00000015617	RPA1	70	61.321	Pelodiscus_sinensis
ENSORLG00015005867	-	98	75.694	ENSPMGG00000000543	RPA1	78	75.694	Periophthalmus_magnuspinnatus
ENSORLG00015005867	-	97	66.353	ENSPMGG00000011589	rpa1	74	66.353	Periophthalmus_magnuspinnatus
ENSORLG00015005867	-	99	59.815	ENSPEMG00000021061	Rpa1	70	59.815	Peromyscus_maniculatus_bairdii
ENSORLG00015005867	-	95	62.981	ENSPCIG00000019049	RPA1	67	62.981	Phascolarctos_cinereus
ENSORLG00015005867	-	95	65.217	ENSPFOG00000003987	rpa1	69	65.217	Poecilia_formosa
ENSORLG00015005867	-	95	65.217	ENSPLAG00000004984	rpa1	69	65.217	Poecilia_latipinna
ENSORLG00015005867	-	100	79.379	ENSPLAG00000008844	-	71	79.379	Poecilia_latipinna
ENSORLG00015005867	-	98	64.336	ENSPMEG00000020602	rpa1	76	64.336	Poecilia_mexicana
ENSORLG00015005867	-	100	81.136	ENSPMEG00000003627	-	68	81.136	Poecilia_mexicana
ENSORLG00015005867	-	95	59.135	ENSPREG00000010174	rpa1	69	59.135	Poecilia_reticulata
ENSORLG00015005867	-	99	82.719	ENSPREG00000010119	RPA1	67	82.719	Poecilia_reticulata
ENSORLG00015005867	-	94	61.353	ENSPCOG00000001799	RPA1	67	61.353	Propithecus_coquereli
ENSORLG00015005867	-	94	62.319	ENSPVAG00000002149	RPA1	67	62.319	Pteropus_vampyrus
ENSORLG00015005867	-	99	82.258	ENSPNYG00000024165	RPA1	67	82.258	Pundamilia_nyererei
ENSORLG00015005867	-	97	66.901	ENSPNYG00000016316	rpa1	75	66.901	Pundamilia_nyererei
ENSORLG00015005867	-	98	57.576	ENSPNAG00000008599	rpa1	73	57.639	Pygocentrus_nattereri
ENSORLG00015005867	-	97	61.215	ENSRNOG00000003123	Rpa1	69	61.215	Rattus_norvegicus
ENSORLG00015005867	-	94	61.353	ENSRBIG00000036587	RPA1	67	61.353	Rhinopithecus_bieti
ENSORLG00015005867	-	94	56.522	ENSRROG00000043278	RPA1	65	56.522	Rhinopithecus_roxellana
ENSORLG00015005867	-	97	35.104	YAR007C	RFA1	69	35.104	Saccharomyces_cerevisiae
ENSORLG00015005867	-	98	60.000	ENSSBOG00000030233	RPA1	75	60.000	Saimiri_boliviensis_boliviensis
ENSORLG00015005867	-	95	62.981	ENSSHAG00000007969	RPA1	67	62.981	Sarcophilus_harrisii
ENSORLG00015005867	-	98	66.821	ENSSFOG00015005362	rpa1	69	66.821	Scleropages_formosus
ENSORLG00015005867	-	99	81.567	ENSSMAG00000019746	RPA1	65	81.567	Scophthalmus_maximus
ENSORLG00015005867	-	98	79.556	ENSSDUG00000016358	RPA1	64	81.922	Seriola_dumerili
ENSORLG00015005867	-	93	67.640	ENSSDUG00000011949	rpa1	71	67.640	Seriola_dumerili
ENSORLG00015005867	-	95	66.908	ENSSLDG00000011806	rpa1	71	67.482	Seriola_lalandi_dorsalis
ENSORLG00015005867	-	98	80.089	ENSSLDG00000020784	RPA1	64	81.693	Seriola_lalandi_dorsalis
ENSORLG00015005867	-	79	56.447	ENSSARG00000007506	RPA1	58	56.447	Sorex_araneus
ENSORLG00015005867	-	97	60.377	ENSSPUG00000007223	RPA1	70	60.377	Sphenodon_punctatus
ENSORLG00015005867	-	95	66.184	ENSSPAG00000009903	rpa1	69	66.184	Stegastes_partitus
ENSORLG00015005867	-	98	80.974	ENSSPAG00000011165	RPA1	72	80.974	Stegastes_partitus
ENSORLG00015005867	-	94	62.560	ENSSSCG00000017822	RPA1	71	62.560	Sus_scrofa
ENSORLG00015005867	-	94	61.800	ENSTGUG00000005775	RPA1	67	61.800	Taeniopygia_guttata
ENSORLG00015005867	-	95	66.826	ENSTRUG00000003616	rpa1	70	66.826	Takifugu_rubripes
ENSORLG00015005867	-	98	78.427	ENSTRUG00000000405	RPA1	61	80.275	Takifugu_rubripes
ENSORLG00015005867	-	96	65.962	ENSTNIG00000016199	rpa1	69	65.962	Tetraodon_nigroviridis
ENSORLG00015005867	-	93	61.916	ENSTBEG00000002709	RPA1	68	61.916	Tupaia_belangeri
ENSORLG00015005867	-	94	61.836	ENSTTRG00000001169	RPA1	67	61.836	Tursiops_truncatus
ENSORLG00015005867	-	91	75.000	ENSUAMG00000015676	RPA1	75	75.000	Ursus_americanus
ENSORLG00015005867	-	98	60.000	ENSUMAG00000009328	RPA1	71	62.077	Ursus_maritimus
ENSORLG00015005867	-	98	58.161	ENSVPAG00000009443	RPA1	71	58.161	Vicugna_pacos
ENSORLG00015005867	-	99	60.277	ENSVVUG00000021715	RPA1	70	60.508	Vulpes_vulpes
ENSORLG00015005867	-	94	63.923	ENSXETG00000013538	rpa1	68	63.923	Xenopus_tropicalis
ENSORLG00015005867	-	99	82.258	ENSXCOG00000009899	-	78	82.258	Xiphophorus_couchianus
ENSORLG00015005867	-	95	65.865	ENSXCOG00000010068	rpa1	72	65.865	Xiphophorus_couchianus
ENSORLG00015005867	-	99	82.028	ENSXMAG00000010333	RPA1	61	82.028	Xiphophorus_maculatus
ENSORLG00015005867	-	97	64.471	ENSXMAG00000004102	rpa1	76	64.471	Xiphophorus_maculatus