EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015006070 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2037 bases
Position: chr17:6633506-6635542
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005255	zf-C2H2	PF00096.26	9.2e-26	1	5
ENSORLP00015005255	zf-C2H2	PF00096.26	9.2e-26	2	5
ENSORLP00015005255	zf-C2H2	PF00096.26	9.2e-26	3	5
ENSORLP00015005255	zf-C2H2	PF00096.26	9.2e-26	4	5
ENSORLP00015005255	zf-C2H2	PF00096.26	9.2e-26	5	5
ENSORLP00015005255	zf-met	PF12874.7	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015006234	GFI1-201	1155	-	ENSORLP00015005255	384 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006070's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015006070	GFI1	50	31.928	ENSORLG00015011171	-	64	33.152
ENSORLG00015006070	GFI1	66	41.558	ENSORLG00015020558	-	65	41.558
ENSORLG00015006070	GFI1	57	45.455	ENSORLG00015007742	-	86	45.455
ENSORLG00015006070	GFI1	57	44.375	ENSORLG00015014916	-	89	44.375
ENSORLG00015006070	GFI1	70	43.293	ENSORLG00015014015	-	89	43.558
ENSORLG00015006070	GFI1	63	43.750	ENSORLG00015012840	-	64	43.750
ENSORLG00015006070	GFI1	61	40.000	ENSORLG00015007270	si:ch211-216l23.1	60	40.000
ENSORLG00015006070	GFI1	64	46.104	ENSORLG00015007168	-	94	47.020
ENSORLG00015006070	GFI1	52	48.387	ENSORLG00015012951	-	81	48.718
ENSORLG00015006070	GFI1	50	41.317	ENSORLG00015002568	zbtb48	52	41.317
ENSORLG00015006070	GFI1	61	43.558	ENSORLG00015011730	-	95	46.296
ENSORLG00015006070	GFI1	51	41.606	ENSORLG00015020022	-	81	41.606
ENSORLG00015006070	GFI1	59	49.315	ENSORLG00015016741	-	97	43.713
ENSORLG00015006070	GFI1	55	43.056	ENSORLG00015012776	-	94	48.193
ENSORLG00015006070	GFI1	63	43.902	ENSORLG00015012339	-	92	42.982
ENSORLG00015006070	GFI1	66	41.781	ENSORLG00015009384	-	93	47.273
ENSORLG00015006070	GFI1	52	46.914	ENSORLG00015018781	zgc:66448	73	47.945
ENSORLG00015006070	GFI1	51	43.478	ENSORLG00015018254	-	88	43.478
ENSORLG00015006070	GFI1	57	43.689	ENSORLG00015011236	-	82	43.689
ENSORLG00015006070	GFI1	52	38.788	ENSORLG00015021191	-	72	39.053
ENSORLG00015006070	GFI1	60	43.750	ENSORLG00015013102	-	91	44.086
ENSORLG00015006070	GFI1	53	45.161	ENSORLG00015018340	znf236	57	45.652
ENSORLG00015006070	GFI1	58	47.879	ENSORLG00015015776	-	98	47.879
ENSORLG00015006070	GFI1	69	42.857	ENSORLG00015007986	-	90	45.033
ENSORLG00015006070	GFI1	58	47.321	ENSORLG00015016420	-	88	43.976
ENSORLG00015006070	GFI1	76	39.506	ENSORLG00015017255	-	53	39.506
ENSORLG00015006070	GFI1	52	41.818	ENSORLG00015008733	znf646	61	41.818
ENSORLG00015006070	GFI1	64	44.512	ENSORLG00015013160	-	98	44.512
ENSORLG00015006070	GFI1	50	38.554	ENSORLG00015015416	snai1a	50	39.506
ENSORLG00015006070	GFI1	51	41.497	ENSORLG00015009640	-	93	43.529
ENSORLG00015006070	GFI1	69	44.512	ENSORLG00015014823	-	89	50.847
ENSORLG00015006070	GFI1	52	39.752	ENSORLG00015007973	-	66	39.752
ENSORLG00015006070	GFI1	53	45.963	ENSORLG00015009782	-	91	45.342
ENSORLG00015006070	GFI1	64	43.452	ENSORLG00015019124	-	92	44.048
ENSORLG00015006070	GFI1	51	41.753	ENSORLG00015016085	-	98	41.753
ENSORLG00015006070	GFI1	64	46.753	ENSORLG00015016558	-	83	43.077
ENSORLG00015006070	GFI1	64	43.750	ENSORLG00015011401	-	91	42.073
ENSORLG00015006070	GFI1	73	40.000	ENSORLG00015021496	PRDM15	56	40.000
ENSORLG00015006070	GFI1	54	42.857	ENSORLG00015018360	znf341	55	42.857
ENSORLG00015006070	GFI1	56	52.128	ENSORLG00015012138	-	56	52.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006070	GFI1	100	59.346	ENSG00000162676	GFI1	100	60.047	Homo_sapiens
ENSORLG00015006070	GFI1	100	61.386	ENSAPOG00000015189	gfi1ab	100	60.644	Acanthochromis_polyacanthus
ENSORLG00015006070	GFI1	100	62.341	ENSACIG00000016354	gfi1ab	100	61.519	Amphilophus_citrinellus
ENSORLG00015006070	GFI1	100	53.924	ENSAOCG00000008339	gfi1ab	100	51.392	Amphiprion_ocellaris
ENSORLG00015006070	GFI1	100	61.881	ENSAPEG00000023870	gfi1ab	100	61.139	Amphiprion_percula
ENSORLG00015006070	GFI1	100	58.987	ENSATEG00000009167	gfi1ab	89	58.228	Anabas_testudineus
ENSORLG00015006070	GFI1	88	62.216	ENSAPLG00000015700	GFI1	82	69.097	Anas_platyrhynchos
ENSORLG00015006070	GFI1	100	59.953	ENSACAG00000004498	GFI1	100	59.953	Anolis_carolinensis
ENSORLG00015006070	GFI1	100	59.579	ENSANAG00000019656	GFI1	100	59.579	Aotus_nancymaae
ENSORLG00015006070	GFI1	100	61.905	ENSACLG00000026458	gfi1ab	93	60.902	Astatotilapia_calliptera
ENSORLG00015006070	GFI1	99	39.018	ENSAMXG00000015228	-	51	65.031	Astyanax_mexicanus
ENSORLG00015006070	GFI1	74	62.034	ENSAMXG00000006669	GFI1	84	63.066	Astyanax_mexicanus
ENSORLG00015006070	GFI1	100	58.955	ENSAMXG00000039600	gfi1ab	100	55.911	Astyanax_mexicanus
ENSORLG00015006070	GFI1	100	59.165	ENSBTAG00000016723	GFI1	100	60.093	Bos_taurus
ENSORLG00015006070	GFI1	100	58.645	ENSCJAG00000017609	GFI1	100	58.879	Callithrix_jacchus
ENSORLG00015006070	GFI1	100	58.145	ENSCAFG00000020155	GFI1	100	59.579	Canis_familiaris
ENSORLG00015006070	GFI1	100	58.145	ENSCAFG00020013371	GFI1	88	59.579	Canis_lupus_dingo
ENSORLG00015006070	GFI1	100	59.813	ENSCHIG00000016135	GFI1	100	60.047	Capra_hircus
ENSORLG00015006070	GFI1	100	59.016	ENSCPOG00000011727	GFI1	100	59.719	Cavia_porcellus
ENSORLG00015006070	GFI1	100	59.346	ENSCCAG00000036072	GFI1	100	59.579	Cebus_capucinus
ENSORLG00015006070	GFI1	100	59.346	ENSCATG00000037873	GFI1	100	60.047	Cercocebus_atys
ENSORLG00015006070	GFI1	82	88.710	ENSCLAG00000005915	GFI1	100	56.818	Chinchilla_lanigera
ENSORLG00015006070	GFI1	99	53.784	ENSCSAG00000001469	GFI1	100	54.595	Chlorocebus_sabaeus
ENSORLG00015006070	GFI1	100	59.346	ENSCANG00000034077	GFI1	100	60.047	Colobus_angolensis_palliatus
ENSORLG00015006070	GFI1	100	58.178	ENSCGRG00001015432	Gfi1	100	58.645	Cricetulus_griseus_chok1gshd
ENSORLG00015006070	GFI1	100	74.000	ENSCSEG00000017729	GFI1	100	74.000	Cynoglossus_semilaevis
ENSORLG00015006070	GFI1	100	61.404	ENSCVAG00000011828	gfi1ab	100	60.652	Cyprinodon_variegatus
ENSORLG00015006070	GFI1	100	70.460	ENSCVAG00000004930	GFI1	100	69.492	Cyprinodon_variegatus
ENSORLG00015006070	GFI1	100	61.728	ENSDARG00000044457	gfi1ab	100	61.728	Danio_rerio
ENSORLG00015006070	GFI1	100	57.809	ENSDNOG00000000782	GFI1	97	59.207	Dasypus_novemcinctus
ENSORLG00015006070	GFI1	100	57.403	ENSEASG00005015509	GFI1	86	59.390	Equus_asinus_asinus
ENSORLG00015006070	GFI1	98	49.630	ENSECAG00000006647	GFI1	92	51.020	Equus_caballus
ENSORLG00015006070	GFI1	100	57.241	ENSEEUG00000000198	GFI1	100	57.506	Erinaceus_europaeus
ENSORLG00015006070	GFI1	100	59.950	ENSELUG00000003015	gfi1ab	99	59.453	Esox_lucius
ENSORLG00015006070	GFI1	100	59.506	ENSELUG00000019033	GFI1	100	59.506	Esox_lucius
ENSORLG00015006070	GFI1	100	57.919	ENSFCAG00000005914	GFI1	100	58.879	Felis_catus
ENSORLG00015006070	GFI1	100	60.401	ENSFHEG00000010997	gfi1ab	100	59.649	Fundulus_heteroclitus
ENSORLG00015006070	GFI1	100	73.086	ENSFHEG00000000341	GFI1	100	73.333	Fundulus_heteroclitus
ENSORLG00015006070	GFI1	100	60.253	ENSGMOG00000007737	gfi1ab	100	60.152	Gadus_morhua
ENSORLG00015006070	GFI1	100	59.564	ENSGALG00000043650	GFI1	100	59.564	Gallus_gallus
ENSORLG00015006070	GFI1	100	61.250	ENSGAFG00000016637	gfi1ab	100	58.750	Gambusia_affinis
ENSORLG00015006070	GFI1	100	69.363	ENSGAFG00000018063	GFI1	100	72.304	Gambusia_affinis
ENSORLG00015006070	GFI1	100	61.558	ENSGACG00000004257	gfi1ab	97	61.055	Gasterosteus_aculeatus
ENSORLG00015006070	GFI1	100	59.346	ENSGGOG00000005320	GFI1	100	60.047	Gorilla_gorilla
ENSORLG00015006070	GFI1	100	61.929	ENSHBUG00000011969	gfi1ab	100	60.914	Haplochromis_burtoni
ENSORLG00015006070	GFI1	100	60.890	ENSHGLG00000008020	GFI1	100	60.890	Heterocephalus_glaber_female
ENSORLG00015006070	GFI1	100	60.890	ENSHGLG00100000610	GFI1	100	60.890	Heterocephalus_glaber_male
ENSORLG00015006070	GFI1	100	63.591	ENSHCOG00000019555	GFI1	100	64.160	Hippocampus_comes
ENSORLG00015006070	GFI1	100	55.257	ENSHCOG00000008590	gfi1ab	100	53.545	Hippocampus_comes
ENSORLG00015006070	GFI1	100	61.364	ENSIPUG00000010071	gfi1ab	87	60.406	Ictalurus_punctatus
ENSORLG00015006070	GFI1	100	58.794	ENSIPUG00000013414	GFI1	100	58.794	Ictalurus_punctatus
ENSORLG00015006070	GFI1	100	57.692	ENSSTOG00000014583	GFI1	100	59.813	Ictidomys_tridecemlineatus
ENSORLG00015006070	GFI1	100	60.957	ENSKMAG00000003810	gfi1ab	100	60.202	Kryptolebias_marmoratus
ENSORLG00015006070	GFI1	100	60.553	ENSLBEG00000027776	gfi1ab	100	59.649	Labrus_bergylta
ENSORLG00015006070	GFI1	100	62.010	ENSLACG00000013362	GFI1	98	61.576	Latimeria_chalumnae
ENSORLG00015006070	GFI1	100	62.469	ENSLOCG00000004711	gfi1ab	100	60.652	Lepisosteus_oculatus
ENSORLG00015006070	GFI1	100	58.042	ENSLAFG00000018346	GFI1	100	59.091	Loxodonta_africana
ENSORLG00015006070	GFI1	100	59.346	ENSMFAG00000045801	GFI1	100	60.047	Macaca_fascicularis
ENSORLG00015006070	GFI1	100	59.346	ENSMNEG00000036338	GFI1	100	60.047	Macaca_nemestrina
ENSORLG00015006070	GFI1	100	59.346	ENSMLEG00000036181	GFI1	100	60.047	Mandrillus_leucophaeus
ENSORLG00015006070	GFI1	100	62.155	ENSMAMG00000008125	gfi1ab	100	60.652	Mastacembelus_armatus
ENSORLG00015006070	GFI1	100	61.905	ENSMZEG00005009895	gfi1ab	100	60.902	Maylandia_zebra
ENSORLG00015006070	GFI1	88	62.963	ENSMGAG00000008187	GFI1	93	65.644	Meleagris_gallopavo
ENSORLG00015006070	GFI1	100	57.692	ENSMICG00000047208	GFI1	100	59.346	Microcebus_murinus
ENSORLG00015006070	GFI1	100	58.291	ENSMMOG00000005556	gfi1ab	100	55.276	Mola_mola
ENSORLG00015006070	GFI1	100	57.209	ENSMODG00000011802	GFI1	100	58.237	Monodelphis_domestica
ENSORLG00015006070	GFI1	100	61.069	ENSMALG00000014672	gfi1ab	100	60.051	Monopterus_albus
ENSORLG00015006070	GFI1	100	58.178	MGP_CAROLIEiJ_G0027508	Gfi1	100	95.556	Mus_caroli
ENSORLG00015006070	GFI1	100	58.411	ENSMUSG00000029275	Gfi1	100	58.879	Mus_musculus
ENSORLG00015006070	GFI1	100	58.178	MGP_PahariEiJ_G0017280	Gfi1	100	95.556	Mus_pahari
ENSORLG00015006070	GFI1	100	58.178	MGP_SPRETEiJ_G0028507	Gfi1	100	58.178	Mus_spretus
ENSORLG00015006070	GFI1	100	63.819	ENSMPUG00000004178	GFI1	97	64.070	Mustela_putorius_furo
ENSORLG00015006070	GFI1	100	58.219	ENSMLUG00000015191	GFI1	97	57.783	Myotis_lucifugus
ENSORLG00015006070	GFI1	100	61.728	ENSNBRG00000015774	gfi1ab	100	60.741	Neolamprologus_brichardi
ENSORLG00015006070	GFI1	88	60.904	ENSNLEG00000010470	GFI1	92	61.436	Nomascus_leucogenys
ENSORLG00015006070	GFI1	100	58.411	ENSOPRG00000001473	GFI1	100	59.579	Ochotona_princeps
ENSORLG00015006070	GFI1	100	61.905	ENSONIG00000019246	gfi1ab	100	60.902	Oreochromis_niloticus
ENSORLG00015006070	GFI1	99	52.419	ENSOCUG00000023553	GFI1	93	53.495	Oryctolagus_cuniculus
ENSORLG00015006070	GFI1	100	60.000	ENSORLG00000013806	gfi1ab	100	58.987	Oryzias_latipes
ENSORLG00015006070	GFI1	100	93.798	ENSORLG00000005060	GFI1	100	93.798	Oryzias_latipes
ENSORLG00015006070	GFI1	100	61.013	ENSORLG00020001602	gfi1ab	100	60.000	Oryzias_latipes_hni
ENSORLG00015006070	GFI1	100	80.729	ENSORLG00020002817	GFI1	100	80.729	Oryzias_latipes_hni
ENSORLG00015006070	GFI1	100	83.709	ENSOMEG00000016722	GFI1	100	84.000	Oryzias_melastigma
ENSORLG00015006070	GFI1	100	61.386	ENSOGAG00000027913	GFI1	100	61.386	Otolemur_garnettii
ENSORLG00015006070	GFI1	98	93.333	ENSOARG00000016329	GFI1	94	52.059	Ovis_aries
ENSORLG00015006070	GFI1	100	60.859	ENSPPAG00000042186	GFI1	100	60.859	Pan_paniscus
ENSORLG00015006070	GFI1	100	57.919	ENSPPRG00000007521	GFI1	100	58.879	Panthera_pardus
ENSORLG00015006070	GFI1	100	59.346	ENSPTRG00000043053	GFI1	100	60.047	Pan_troglodytes
ENSORLG00015006070	GFI1	100	59.346	ENSPANG00000016433	GFI1	100	60.047	Papio_anubis
ENSORLG00015006070	GFI1	100	62.745	ENSPKIG00000004263	GFI1	100	62.745	Paramormyrops_kingsleyae
ENSORLG00015006070	GFI1	91	60.989	ENSPSIG00000008734	GFI1	90	64.506	Pelodiscus_sinensis
ENSORLG00015006070	GFI1	99	57.480	ENSPMGG00000011041	GFI1	57	92.818	Periophthalmus_magnuspinnatus
ENSORLG00015006070	GFI1	100	61.055	ENSPMGG00000012546	gfi1ab	100	61.055	Periophthalmus_magnuspinnatus
ENSORLG00015006070	GFI1	100	58.920	ENSPCIG00000013728	GFI1	100	59.390	Phascolarctos_cinereus
ENSORLG00015006070	GFI1	100	60.750	ENSPFOG00000023214	gfi1ab	100	58.250	Poecilia_formosa
ENSORLG00015006070	GFI1	100	69.927	ENSPLAG00000005376	GFI1	91	72.616	Poecilia_latipinna
ENSORLG00015006070	GFI1	100	60.750	ENSPLAG00000010879	gfi1ab	93	81.481	Poecilia_latipinna
ENSORLG00015006070	GFI1	100	70.864	ENSPMEG00000019299	GFI1	100	73.580	Poecilia_mexicana
ENSORLG00015006070	GFI1	100	60.750	ENSPMEG00000013694	gfi1ab	100	58.250	Poecilia_mexicana
ENSORLG00015006070	GFI1	100	61.446	ENSPREG00000007997	GFI1	100	64.578	Poecilia_reticulata
ENSORLG00015006070	GFI1	100	61.250	ENSPREG00000014097	gfi1ab	100	58.750	Poecilia_reticulata
ENSORLG00015006070	GFI1	100	49.188	ENSPCAG00000011020	GFI1	100	49.188	Procavia_capensis
ENSORLG00015006070	GFI1	100	57.466	ENSPCOG00000020540	GFI1	100	59.346	Propithecus_coquereli
ENSORLG00015006070	GFI1	100	58.295	ENSPVAG00000006928	GFI1	100	58.986	Pteropus_vampyrus
ENSORLG00015006070	GFI1	100	61.905	ENSPNYG00000021183	gfi1ab	100	60.902	Pundamilia_nyererei
ENSORLG00015006070	GFI1	100	59.698	ENSPNAG00000027258	gfi1ab	100	57.576	Pygocentrus_nattereri
ENSORLG00015006070	GFI1	100	57.789	ENSPNAG00000028014	GFI1	100	56.927	Pygocentrus_nattereri
ENSORLG00015006070	GFI1	50	65.432	ENSPNAG00000014299	-	53	65.432	Pygocentrus_nattereri
ENSORLG00015006070	GFI1	100	58.275	ENSRNOG00000002042	Gfi1	100	58.508	Rattus_norvegicus
ENSORLG00015006070	GFI1	100	59.346	ENSRBIG00000036467	GFI1	100	60.280	Rhinopithecus_bieti
ENSORLG00015006070	GFI1	100	59.346	ENSRROG00000031687	GFI1	100	60.280	Rhinopithecus_roxellana
ENSORLG00015006070	GFI1	100	58.879	ENSSBOG00000031300	GFI1	100	59.813	Saimiri_boliviensis_boliviensis
ENSORLG00015006070	GFI1	100	64.662	ENSSFOG00015020295	gfi1	100	63.659	Scleropages_formosus
ENSORLG00015006070	GFI1	100	61.443	ENSSMAG00000002782	gfi1ab	100	60.199	Scophthalmus_maximus
ENSORLG00015006070	GFI1	100	62.183	ENSSDUG00000022410	gfi1ab	100	62.183	Seriola_dumerili
ENSORLG00015006070	GFI1	100	62.183	ENSSLDG00000020163	gfi1ab	100	62.183	Seriola_lalandi_dorsalis
ENSORLG00015006070	GFI1	79	81.481	ENSSPAG00000009140	gfi1ab	97	81.481	Stegastes_partitus
ENSORLG00015006070	GFI1	100	60.142	ENSSSCG00000006902	GFI1	100	61.085	Sus_scrofa
ENSORLG00015006070	GFI1	88	62.079	ENSTGUG00000006060	GFI1	93	65.152	Taeniopygia_guttata
ENSORLG00015006070	GFI1	100	61.809	ENSTRUG00000000415	gfi1ab	100	61.209	Takifugu_rubripes
ENSORLG00015006070	GFI1	100	59.204	ENSTNIG00000000651	gfi1ab	97	57.750	Tetraodon_nigroviridis
ENSORLG00015006070	GFI1	100	59.122	ENSTTRG00000000082	GFI1	100	60.046	Tursiops_truncatus
ENSORLG00015006070	GFI1	100	60.233	ENSUAMG00000021124	GFI1	91	60.930	Ursus_americanus
ENSORLG00015006070	GFI1	100	60.247	ENSXETG00000023006	gfi1	98	58.780	Xenopus_tropicalis
ENSORLG00015006070	GFI1	98	64.841	ENSXMAG00000009274	GFI1	70	67.898	Xiphophorus_maculatus
ENSORLG00015006070	GFI1	100	60.591	ENSXMAG00000010523	gfi1ab	100	58.128	Xiphophorus_maculatus