EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015006223 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3663 bases
Position: chr19:10988423-10992085
Accession: 101158641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005444	MMR_HSR1	PF01926.23	2.8e-05	1	1
ENSORLP00015025214	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005925	-	2196	XM_004080416	ENSORLP00015005444	220 (aa)	XP_004080464	-
ENSORLT00015005935	-	360	-	ENSORLP00015025214	119 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015006223	-	94	83.929	ENSORLG00015010542	sar1ab	100	81.313
ENSORLG00015006223	-	86	36.449	ENSORLG00015009897	arl4cb	74	33.784
ENSORLG00015006223	-	82	35.714	ENSORLG00015019836	-	94	30.387
ENSORLG00015006223	-	57	34.646	ENSORLG00015018436	arl8bb	68	34.646
ENSORLG00015006223	-	87	33.010	ENSORLG00015022780	-	78	32.394
ENSORLG00015006223	-	82	32.323	ENSORLG00015004725	-	51	32.323
ENSORLG00015006223	-	73	32.955	ENSORLG00015010864	arl11	71	36.283
ENSORLG00015006223	-	71	36.264	ENSORLG00015014008	-	70	33.835
ENSORLG00015006223	-	86	33.654	ENSORLG00015014133	ARL6	96	31.053
ENSORLG00015006223	-	76	31.111	ENSORLG00015020012	arl5a	50	31.111
ENSORLG00015006223	-	75	35.955	ENSORLG00015002471	-	71	31.690
ENSORLG00015006223	-	76	40.860	ENSORLG00015004028	-	90	34.211
ENSORLG00015006223	-	94	91.964	ENSORLG00015007044	sar1b	100	85.354
ENSORLG00015006223	-	86	34.951	ENSORLG00015022526	arl3l2	55	34.951
ENSORLG00015006223	-	58	34.375	ENSORLG00015017615	arl8ba	69	34.375
ENSORLG00015006223	-	82	34.694	ENSORLG00015015557	arf2b	91	30.168
ENSORLG00015006223	-	76	32.222	ENSORLG00015009927	arl8	50	32.222
ENSORLG00015006223	-	87	35.185	ENSORLG00015017167	arl4aa	72	34.000
ENSORLG00015006223	-	87	33.010	ENSORLG00015001409	arf3b	78	32.394
ENSORLG00015006223	-	87	33.981	ENSORLG00015010044	arl2	93	32.240
ENSORLG00015006223	-	86	36.893	ENSORLG00015002736	arl1	96	30.682
ENSORLG00015006223	-	82	34.653	ENSORLG00015007752	arf1	96	30.978

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006223	-	94	83.929	ENSACIG00000019827	sar1ab	100	79.798	Amphilophus_citrinellus
ENSORLG00015006223	-	94	84.821	ENSAOCG00000022062	sar1ab	100	80.303	Amphiprion_ocellaris
ENSORLG00015006223	-	94	84.821	ENSAPEG00000011525	sar1ab	100	80.303	Amphiprion_percula
ENSORLG00015006223	-	94	87.500	ENSATEG00000003466	sar1ab	100	83.333	Anabas_testudineus
ENSORLG00015006223	-	94	83.036	ENSACLG00000013053	sar1ab	100	77.778	Astatotilapia_calliptera
ENSORLG00015006223	-	94	86.607	ENSCSEG00000004825	sar1ab	100	81.818	Cynoglossus_semilaevis
ENSORLG00015006223	-	94	83.929	ENSCVAG00000015162	sar1ab	100	80.303	Cyprinodon_variegatus
ENSORLG00015006223	-	94	93.750	ENSCVAG00000006500	-	100	88.889	Cyprinodon_variegatus
ENSORLG00015006223	-	94	88.393	ENSDARG00000033320	sar1ab	100	83.333	Danio_rerio
ENSORLG00015006223	-	94	95.536	ENSELUG00000013652	sar1a	100	90.404	Esox_lucius
ENSORLG00015006223	-	94	88.393	ENSELUG00000024279	sar1ab	100	82.323	Esox_lucius
ENSORLG00015006223	-	94	83.036	ENSFHEG00000021773	sar1ab	100	79.293	Fundulus_heteroclitus
ENSORLG00015006223	-	94	93.750	ENSFHEG00000012352	-	100	89.394	Fundulus_heteroclitus
ENSORLG00015006223	-	94	83.929	ENSGMOG00000012588	sar1ab	100	79.293	Gadus_morhua
ENSORLG00015006223	-	94	83.929	ENSGAFG00000009702	sar1ab	100	79.798	Gambusia_affinis
ENSORLG00015006223	-	94	92.857	ENSGAFG00000004846	-	100	88.889	Gambusia_affinis
ENSORLG00015006223	-	94	88.393	ENSGACG00000008616	sar1ab	100	84.343	Gasterosteus_aculeatus
ENSORLG00015006223	-	94	83.036	ENSHBUG00000021221	sar1ab	100	78.283	Haplochromis_burtoni
ENSORLG00015006223	-	94	86.607	ENSHCOG00000002845	sar1ab	88	75.229	Hippocampus_comes
ENSORLG00015006223	-	94	84.821	ENSKMAG00000018006	sar1ab	100	79.798	Kryptolebias_marmoratus
ENSORLG00015006223	-	94	87.500	ENSLBEG00000001114	sar1ab	100	82.828	Labrus_bergylta
ENSORLG00015006223	-	94	86.607	ENSMAMG00000021314	sar1ab	100	82.828	Mastacembelus_armatus
ENSORLG00015006223	-	94	83.036	ENSMZEG00005027606	sar1ab	100	77.778	Maylandia_zebra
ENSORLG00015006223	-	94	87.500	ENSMMOG00000010360	sar1ab	100	82.828	Mola_mola
ENSORLG00015006223	-	94	88.393	ENSMALG00000005831	sar1ab	100	82.828	Monopterus_albus
ENSORLG00015006223	-	94	83.036	ENSNBRG00000018772	sar1ab	100	78.283	Neolamprologus_brichardi
ENSORLG00015006223	-	94	83.036	ENSONIG00000018509	sar1ab	100	79.293	Oreochromis_niloticus
ENSORLG00015006223	-	94	83.929	ENSORLG00000006779	sar1ab	67	81.313	Oryzias_latipes
ENSORLG00015006223	-	100	99.545	ENSORLG00000009132	-	100	99.545	Oryzias_latipes
ENSORLG00015006223	-	100	99.091	ENSORLG00020007024	-	100	99.091	Oryzias_latipes_hni
ENSORLG00015006223	-	94	84.821	ENSORLG00020005458	sar1ab	100	81.818	Oryzias_latipes_hni
ENSORLG00015006223	-	94	84.821	ENSOMEG00000004948	sar1ab	100	81.313	Oryzias_melastigma
ENSORLG00015006223	-	96	97.642	ENSOMEG00000012020	-	100	98.990	Oryzias_melastigma
ENSORLG00015006223	-	94	93.750	ENSPKIG00000007615	sar1ab	100	84.343	Paramormyrops_kingsleyae
ENSORLG00015006223	-	94	88.393	ENSPMGG00000013330	sar1ab	100	83.838	Periophthalmus_magnuspinnatus
ENSORLG00015006223	-	94	84.821	ENSPFOG00000023432	sar1ab	100	80.808	Poecilia_formosa
ENSORLG00015006223	-	94	84.821	ENSPLAG00000023705	sar1ab	100	80.808	Poecilia_latipinna
ENSORLG00015006223	-	94	92.857	ENSPMEG00000001717	-	100	87.879	Poecilia_mexicana
ENSORLG00015006223	-	94	84.821	ENSPMEG00000000559	sar1ab	100	80.808	Poecilia_mexicana
ENSORLG00015006223	-	94	84.821	ENSPREG00000016098	sar1ab	100	80.808	Poecilia_reticulata
ENSORLG00015006223	-	94	83.036	ENSPNYG00000011603	sar1ab	100	78.283	Pundamilia_nyererei
ENSORLG00015006223	-	94	87.500	ENSPNAG00000008007	sar1ab	100	82.828	Pygocentrus_nattereri
ENSORLG00015006223	-	94	95.536	ENSSFOG00015014010	sar1a	100	88.384	Scleropages_formosus
ENSORLG00015006223	-	93	89.189	ENSSMAG00000020758	sar1ab	80	89.189	Scophthalmus_maximus
ENSORLG00015006223	-	94	87.500	ENSSDUG00000010773	sar1ab	100	82.323	Seriola_dumerili
ENSORLG00015006223	-	94	87.500	ENSSLDG00000025558	sar1ab	100	82.323	Seriola_lalandi_dorsalis
ENSORLG00015006223	-	94	85.714	ENSSPAG00000009194	sar1ab	100	81.313	Stegastes_partitus
ENSORLG00015006223	-	94	85.714	ENSTRUG00000007269	sar1ab	100	80.303	Takifugu_rubripes
ENSORLG00015006223	-	94	84.821	ENSTNIG00000008635	sar1ab	100	80.303	Tetraodon_nigroviridis
ENSORLG00015006223	-	94	92.857	ENSXMAG00000026223	SAR1A	100	88.889	Xiphophorus_maculatus
ENSORLG00015006223	-	94	84.821	ENSXMAG00000003130	sar1ab	100	80.303	Xiphophorus_maculatus